RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 TXNDC16Q9P2K2 825 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 KIF5BP33176 963 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 RSPH3Q86UC2 560 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 FBF1Q8TES7 1133 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 RNF41Q9H4P4 317 aaPredicted RBP16.49■□□□□ 0.23
SPRED1-201ENST00000299084 SLC12A7Q9Y666 1083 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 SSRP1Q08945 709 aaKnown RBP16.49■□□□□ 0.23
SPRED1-201ENST00000299084 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
SPRED1-201ENST00000299084 VAT1LQ9HCJ6 419 aa16.49■□□□□ 0.23
SPRED1-201ENST00000299084 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
SPRED1-201ENST00000299084 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
SPRED1-201ENST00000299084 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
SPRED1-201ENST00000299084 CRCPO75575 148 aa16.48■□□□□ 0.23
SPRED1-201ENST00000299084 ZNF692Q9BU19 519 aaPredicted RBP16.48■□□□□ 0.23
SPRED1-201ENST00000299084 IFI16Q16666 785 aaKnown RBP16.48■□□□□ 0.23
SPRED1-201ENST00000299084 FAM212AQ96EL1 285 aa16.48■□□□□ 0.23
SPRED1-201ENST00000299084 ZBTB16Q05516 673 aa16.48■□□□□ 0.23
SPRED1-201ENST00000299084 SPOUT1Q5T280 376 aaKnown RBP16.48■□□□□ 0.23
SPRED1-201ENST00000299084 TBCAO75347 108 aaKnown RBP16.48■□□□□ 0.23
SPRED1-201ENST00000299084 MTIF2P46199 727 aaKnown RBP16.47■□□□□ 0.23
SPRED1-201ENST00000299084 TRAF1Q13077 416 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 TTC36A6NLP5 189 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 NOL3O60936 208 aaKnown RBP16.47■□□□□ 0.23
SPRED1-201ENST00000299084 JAKMIP1Q96N16 626 aaKnown RBP16.47■□□□□ 0.23
SPRED1-201ENST00000299084 SRGAP3O43295 1099 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 SULT6B1Q6IMI4 303 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 C1orf115Q9H7X2 142 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 POLR3GO15318 223 aaPredicted RBP16.47■□□□□ 0.23
SPRED1-201ENST00000299084 PDE4BQ07343 736 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 PANK1Q8TE04 598 aa16.47■□□□□ 0.23
SPRED1-201ENST00000299084 LDHCP07864 332 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 NBPF14Q5TI25 921 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 CCDC83Q8IWF9 413 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 LRRC27Q9C0I9 530 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 NUP62CLQ9H1M0 184 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 CEP83Q9Y592 693 aa16.46■□□□□ 0.23
SPRED1-201ENST00000299084 PDCL2Q8N4E4 241 aa16.46■□□□□ 0.22
SPRED1-201ENST00000299084 PPP4R3BQ5MIZ7 849 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 GSDMBQ8TAX9 411 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 PDIA4P13667 645 aaKnown RBP16.45■□□□□ 0.22
SPRED1-201ENST00000299084 TCHPQ9BT92 498 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 SRRTQ9BXP5 876 aaKnown RBP16.45■□□□□ 0.22
SPRED1-201ENST00000299084 PAIP2Q9BPZ3 127 aaKnown RBP16.45■□□□□ 0.22
SPRED1-201ENST00000299084 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
SPRED1-201ENST00000299084 GSTO1P78417 241 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 MSANTD4Q8NCY6 345 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 KAT14Q9H8E8 782 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
SPRED1-201ENST00000299084 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
SPRED1-201ENST00000299084 HAUS2Q9NVX0 235 aa16.45■□□□□ 0.22
SPRED1-201ENST00000299084 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 GABPAQ06546 454 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 NACA2Q9H009 215 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 VIMP08670 466 aaKnown RBP16.44■□□□□ 0.22
SPRED1-201ENST00000299084 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 PROCA1Q8NCQ7 364 aaPredicted RBP16.44■□□□□ 0.22
SPRED1-201ENST00000299084 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
SPRED1-201ENST00000299084 CCDC155Q8N6L0 562 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
SPRED1-201ENST00000299084 CCDC6Q16204 474 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 GEN1Q17RS7 908 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
SPRED1-201ENST00000299084 YEATS4O95619 227 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 CLIP2Q9UDT6 1046 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 FYCO1Q9BQS8 1478 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPRED1-201ENST00000299084 ZFP91Q96JP5 570 aaPredicted RBP16.43■□□□□ 0.22
SPRED1-201ENST00000299084 GSTA5Q7RTV2 222 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 ZNF213O14771 459 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 MAK16Q9BXY0 300 aaKnown RBP16.43■□□□□ 0.22
SPRED1-201ENST00000299084 HMGB1P1B2RPK0 211 aaPredicted RBP16.43■□□□□ 0.22
SPRED1-201ENST00000299084 BRDTQ58F21 947 aaPredicted RBP16.43■□□□□ 0.22
SPRED1-201ENST00000299084 ATP2C2O75185 946 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 KRT13P13646 458 aa16.43■□□□□ 0.22
SPRED1-201ENST00000299084 RPUSD2Q8IZ73 545 aaKnown RBP16.43■□□□□ 0.22
SPRED1-201ENST00000299084 KIF4BQ2VIQ3 1234 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 DYNC1I1O14576 645 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 EXOC5O00471 708 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 TSPY2A6NKD2 308 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
SPRED1-201ENST00000299084 OPA1O60313 960 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 KCNH5Q8NCM2 988 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 FAM107BQ9H098 131 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 FAM169AQ9Y6X4 670 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 CASTP20810 708 aaKnown RBP16.41■□□□□ 0.22
SPRED1-201ENST00000299084 EPSTI1Q96J88 318 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms