RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 SRGNP10124 158 aa14.13□□□□□ -0.15
RFC4-201ENST00000296273 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
RFC4-201ENST00000296273 MASTLQ96GX5 879 aa14.13□□□□□ -0.15
RFC4-201ENST00000296273 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
RFC4-201ENST00000296273 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
RFC4-201ENST00000296273 COL11A2P13942 1736 aaPredicted RBP14.13□□□□□ -0.15
RFC4-201ENST00000296273 IQCA1LA6NCM1 817 aa14.12□□□□□ -0.15
RFC4-201ENST00000296273 BTBD11A6QL63 1104 aa14.12□□□□□ -0.15
RFC4-201ENST00000296273 A1BGP04217 495 aa14.12□□□□□ -0.15
RFC4-201ENST00000296273 PRPF40BQ6NWY9 871 aaKnown RBP14.12□□□□□ -0.15
RFC4-201ENST00000296273 CLEC4GQ6UXB4 293 aa14.12□□□□□ -0.15
RFC4-201ENST00000296273 DZIP3Q86Y13 1208 aaKnown RBP14.12□□□□□ -0.15
RFC4-201ENST00000296273 CCDC24Q8N4L8 307 aa14.11□□□□□ -0.15
RFC4-201ENST00000296273 ZNF652Q9Y2D9 606 aa14.11□□□□□ -0.15
RFC4-201ENST00000296273 BCORQ6W2J9 1755 aa14.11□□□□□ -0.15
RFC4-201ENST00000296273 RGL2O15211 777 aa14.1□□□□□ -0.15
RFC4-201ENST00000296273 CAPN15O75808 1086 aa14.1□□□□□ -0.15
RFC4-201ENST00000296273 DDNO94850 711 aaPredicted RBP14.1□□□□□ -0.15
RFC4-201ENST00000296273 ARFGEF2Q9Y6D5 1785 aa14.1□□□□□ -0.15
RFC4-201ENST00000296273 PCNTO95613 3336 aa14.1□□□□□ -0.15
RFC4-201ENST00000296273 CCDC93Q567U6 631 aa14.09□□□□□ -0.15
RFC4-201ENST00000296273 CFAP53Q96M91 514 aa14.09□□□□□ -0.15
RFC4-201ENST00000296273 NPR1P16066 1061 aa14.09□□□□□ -0.15
RFC4-201ENST00000296273 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
RFC4-201ENST00000296273 LDHDQ86WU2 507 aa14.09□□□□□ -0.15
RFC4-201ENST00000296273 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
RFC4-201ENST00000296273 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
RFC4-201ENST00000296273 SLX4Q8IY92 1834 aa14.08□□□□□ -0.16
RFC4-201ENST00000296273 KLRG2A4D1S0 409 aaPredicted RBP14.08□□□□□ -0.16
RFC4-201ENST00000296273 SNRPA1P09661 255 aaKnown RBP14.08□□□□□ -0.16
RFC4-201ENST00000296273 PRKAR2BP31323 418 aa14.08□□□□□ -0.16
RFC4-201ENST00000296273 TPTE2Q6XPS3 522 aa14.08□□□□□ -0.16
RFC4-201ENST00000296273 RTF1Q92541 710 aaKnown RBP14.08□□□□□ -0.16
RFC4-201ENST00000296273 RSPH6AQ9H0K4 717 aa14.08□□□□□ -0.16
RFC4-201ENST00000296273 NUDCQ9Y266 331 aa14.08□□□□□ -0.16
RFC4-201ENST00000296273 USP16Q9Y5T5 823 aa14.08□□□□□ -0.16
RFC4-201ENST00000296273 KCNQ3O43525 872 aa14.07□□□□□ -0.16
RFC4-201ENST00000296273 FKBP4Q02790 459 aaKnown RBP eCLIP14.07□□□□□ -0.16
RFC4-201ENST00000296273 C7orf43Q8WVR3 580 aa14.07□□□□□ -0.16
RFC4-201ENST00000296273 MKRN1Q9UHC7 482 aaKnown RBP14.07□□□□□ -0.16
RFC4-201ENST00000296273 SCN4AP35499 1836 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 PASKQ96RG2 1323 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 CNTNAP1P78357 1384 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 ALDH1B1P30837 517 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 PHACTR3Q96KR7 559 aa14.06□□□□□ -0.16
RFC4-201ENST00000296273 TAF1DQ9H5J8 278 aaPredicted RBP14.06□□□□□ -0.16
RFC4-201ENST00000296273 CACNA1SQ13698 1873 aa14.05□□□□□ -0.16
RFC4-201ENST00000296273 HTATSF1O43719 755 aaKnown RBP14.04□□□□□ -0.16
RFC4-201ENST00000296273 PNMA8AQ86V59 439 aaPredicted RBP14.04□□□□□ -0.16
RFC4-201ENST00000296273 HACL1Q9UJ83 578 aa14.04□□□□□ -0.16
RFC4-201ENST00000296273 NIP7Q9Y221 180 aaKnown RBP eCLIP14.04□□□□□ -0.16
RFC4-201ENST00000296273 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
RFC4-201ENST00000296273 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
RFC4-201ENST00000296273 PIP4K2AP48426 406 aaPredicted RBP14.03□□□□□ -0.16
RFC4-201ENST00000296273 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
RFC4-201ENST00000296273 PRDM10Q9NQV6 1147 aa14.03□□□□□ -0.16
RFC4-201ENST00000296273 ITGBL1O95965 494 aaPredicted RBP14.02□□□□□ -0.17
RFC4-201ENST00000296273 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.17
RFC4-201ENST00000296273 AIDAQ96BJ3 306 aa14.02□□□□□ -0.17
RFC4-201ENST00000296273 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
RFC4-201ENST00000296273 FZD9O00144 591 aa14.01□□□□□ -0.17
RFC4-201ENST00000296273 U2AF1L5P0DN76 240 aaPredicted RBP14.01□□□□□ -0.17
RFC4-201ENST00000296273 EPHX2P34913 555 aa14.01□□□□□ -0.17
RFC4-201ENST00000296273 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
RFC4-201ENST00000296273 U2AF1Q01081 240 aaKnown RBP eCLIP14.01□□□□□ -0.17
RFC4-201ENST00000296273 EAPPQ56P03 285 aaPredicted RBP14.01□□□□□ -0.17
RFC4-201ENST00000296273 CC2D2BQ6DHV5 1058 aa14.01□□□□□ -0.17
RFC4-201ENST00000296273 MCM10Q7L590 875 aa14.01□□□□□ -0.17
RFC4-201ENST00000296273 NYXQ9GZU5 481 aa14.01□□□□□ -0.17
RFC4-201ENST00000296273 ZNF277Q9NRM2 450 aaPredicted RBP14.01□□□□□ -0.17
RFC4-201ENST00000296273 NBPF26B4DH59 902 aa14□□□□□ -0.17
RFC4-201ENST00000296273 FOXN1O15353 648 aa14□□□□□ -0.17
RFC4-201ENST00000296273 CTCFP49711 727 aaPredicted RBP14□□□□□ -0.17
RFC4-201ENST00000296273 DDX10Q13206 875 aaKnown RBP14□□□□□ -0.17
RFC4-201ENST00000296273 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
RFC4-201ENST00000296273 GRIPAP1Q4V328 841 aa14□□□□□ -0.17
RFC4-201ENST00000296273 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
RFC4-201ENST00000296273 GPC2Q8N158 579 aa14□□□□□ -0.17
RFC4-201ENST00000296273 NBPF15Q8N660 670 aa14□□□□□ -0.17
RFC4-201ENST00000296273 JDP2Q8WYK2 163 aa14□□□□□ -0.17
RFC4-201ENST00000296273 PSMD1Q99460 953 aa14□□□□□ -0.17
RFC4-201ENST00000296273 CLEC11AQ9Y240 323 aa14□□□□□ -0.17
RFC4-201ENST00000296273 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
RFC4-201ENST00000296273 ERVV-1B6SEH8 477 aa13.99□□□□□ -0.17
RFC4-201ENST00000296273 ANP32CO43423 234 aa13.99□□□□□ -0.17
RFC4-201ENST00000296273 VEGFBP49765 207 aa13.99□□□□□ -0.17
RFC4-201ENST00000296273 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
RFC4-201ENST00000296273 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
RFC4-201ENST00000296273 ADAMTSL1Q8N6G6 1762 aa13.99□□□□□ -0.17
RFC4-201ENST00000296273 RASSF10A6NK89 507 aa13.98□□□□□ -0.17
RFC4-201ENST00000296273 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
RFC4-201ENST00000296273 HLFQ16534 295 aa13.98□□□□□ -0.17
RFC4-201ENST00000296273 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
RFC4-201ENST00000296273 CNTROBQ8N137 903 aa13.98□□□□□ -0.17
RFC4-201ENST00000296273 RNF123Q5XPI4 1314 aa13.98□□□□□ -0.17
RFC4-201ENST00000296273 NEFMP07197 916 aa13.97□□□□□ -0.17
RFC4-201ENST00000296273 EIF6P56537 245 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms