RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
NCSTN-201ENST00000294785 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
NCSTN-201ENST00000294785 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
NCSTN-201ENST00000294785 TM6SF1Q9BZW5 370 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
NCSTN-201ENST00000294785 OFD1O75665 1012 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 AK2P54819 239 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 ESCO1Q5FWF5 840 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 CWC27Q6UX04 472 aaKnown RBP16.47■□□□□ 0.23
NCSTN-201ENST00000294785 MPRIPQ6WCQ1 1025 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 ARHGEF25Q86VW2 580 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 KCNB2Q92953 911 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 MAP3K2Q9Y2U5 619 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 ATP6V1DQ9Y5K8 247 aa16.47■□□□□ 0.23
NCSTN-201ENST00000294785 TERF1P54274 439 aa16.46■□□□□ 0.23
NCSTN-201ENST00000294785 UTYO14607 1347 aa16.46■□□□□ 0.23
NCSTN-201ENST00000294785 TCHHQ07283 1943 aa16.46■□□□□ 0.23
NCSTN-201ENST00000294785 ZSCAN22P10073 491 aaPredicted RBP16.46■□□□□ 0.23
NCSTN-201ENST00000294785 FAM184AQ8NB25 1140 aa16.46■□□□□ 0.23
NCSTN-201ENST00000294785 EVI5LQ96CN4 794 aa16.46■□□□□ 0.23
NCSTN-201ENST00000294785 HIP1O00291 1037 aa16.46■□□□□ 0.22
NCSTN-201ENST00000294785 VPS53Q5VIR6 699 aa16.46■□□□□ 0.22
NCSTN-201ENST00000294785 USP48Q86UV5 1035 aa16.46■□□□□ 0.22
NCSTN-201ENST00000294785 RASEFQ8IZ41 740 aa16.46■□□□□ 0.22
NCSTN-201ENST00000294785 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.22
NCSTN-201ENST00000294785 CCDC39Q9UFE4 941 aa16.46■□□□□ 0.22
NCSTN-201ENST00000294785 LETM1O95202 739 aaPredicted RBP16.45■□□□□ 0.22
NCSTN-201ENST00000294785 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
NCSTN-201ENST00000294785 LINS1Q8NG48 757 aa16.45■□□□□ 0.22
NCSTN-201ENST00000294785 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
NCSTN-201ENST00000294785 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
NCSTN-201ENST00000294785 GCP02774 474 aa16.45■□□□□ 0.22
NCSTN-201ENST00000294785 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
NCSTN-201ENST00000294785 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
NCSTN-201ENST00000294785 SH2B1Q9NRF2 756 aaPredicted RBP16.45■□□□□ 0.22
NCSTN-201ENST00000294785 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
NCSTN-201ENST00000294785 STX6O43752 255 aa16.44■□□□□ 0.22
NCSTN-201ENST00000294785 ANXA1P04083 346 aa16.44■□□□□ 0.22
NCSTN-201ENST00000294785 PDIA4P13667 645 aaKnown RBP16.44■□□□□ 0.22
NCSTN-201ENST00000294785 ZKSCAN5Q9Y2L8 839 aa16.44■□□□□ 0.22
NCSTN-201ENST00000294785 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
NCSTN-201ENST00000294785 CASTP20810 708 aaKnown RBP16.43■□□□□ 0.22
NCSTN-201ENST00000294785 CSPP1Q1MSJ5 1256 aa16.43■□□□□ 0.22
NCSTN-201ENST00000294785 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
NCSTN-201ENST00000294785 UVSSAQ2YD98 709 aa16.43■□□□□ 0.22
NCSTN-201ENST00000294785 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
NCSTN-201ENST00000294785 GRM8O00222 908 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 SYT1P21579 422 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 ANKRD24Q8TF21 1146 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 KIF1AQ12756 1690 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 UBE2HP62256 183 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
NCSTN-201ENST00000294785 SNRKQ9NRH2 765 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 RRP9O43818 475 aaKnown RBP16.42■□□□□ 0.22
NCSTN-201ENST00000294785 GADD45BO75293 160 aaPredicted RBP16.42■□□□□ 0.22
NCSTN-201ENST00000294785 F13A1P00488 732 aa16.42■□□□□ 0.22
NCSTN-201ENST00000294785 MRC1P22897 1456 aa16.41■□□□□ 0.22
NCSTN-201ENST00000294785 CCDC171Q6TFL3 1326 aa16.41■□□□□ 0.22
NCSTN-201ENST00000294785 MST1RQ04912 1400 aa16.41■□□□□ 0.22
NCSTN-201ENST00000294785 ZKSCAN1P17029 563 aaPredicted RBP16.41■□□□□ 0.22
NCSTN-201ENST00000294785 PDRG1Q9NUG6 133 aa16.41■□□□□ 0.22
NCSTN-201ENST00000294785 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
NCSTN-201ENST00000294785 NECTIN1Q15223 517 aa16.41■□□□□ 0.22
NCSTN-201ENST00000294785 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
NCSTN-201ENST00000294785 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
NCSTN-201ENST00000294785 AACSQ86V21 672 aa16.4■□□□□ 0.22
NCSTN-201ENST00000294785 PTH1RQ03431 593 aa16.4■□□□□ 0.22
NCSTN-201ENST00000294785 G3BP1Q13283 466 aaKnown RBP eCLIP16.4■□□□□ 0.22
NCSTN-201ENST00000294785 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
NCSTN-201ENST00000294785 GDPD2Q9HCC8 539 aa16.4■□□□□ 0.22
NCSTN-201ENST00000294785 CWF19L2Q2TBE0 894 aaKnown RBP16.39■□□□□ 0.21
NCSTN-201ENST00000294785 ABCC6O95255 1503 aa16.39■□□□□ 0.21
NCSTN-201ENST00000294785 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
NCSTN-201ENST00000294785 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.21
NCSTN-201ENST00000294785 CNPY2Q9Y2B0 182 aa16.39■□□□□ 0.21
NCSTN-201ENST00000294785 PLEKHG2Q9H7P9 1386 aa16.39■□□□□ 0.21
NCSTN-201ENST00000294785 RNF214Q8ND24 703 aa16.39■□□□□ 0.21
NCSTN-201ENST00000294785 MAP4K1Q92918 833 aa16.39■□□□□ 0.21
NCSTN-201ENST00000294785 SUCLG2Q96I99 432 aa16.39■□□□□ 0.21
NCSTN-201ENST00000294785 C5P01031 1676 aa16.38■□□□□ 0.21
NCSTN-201ENST00000294785 PSMA5P28066 241 aa16.38■□□□□ 0.21
NCSTN-201ENST00000294785 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
NCSTN-201ENST00000294785 SASH1O94885 1247 aa16.38■□□□□ 0.21
NCSTN-201ENST00000294785 GJB2P29033 226 aa16.38■□□□□ 0.21
NCSTN-201ENST00000294785 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
NCSTN-201ENST00000294785 KAZALD1Q96I82 304 aa16.38■□□□□ 0.21
NCSTN-201ENST00000294785 BICC1Q9H694 974 aaKnown RBP16.38■□□□□ 0.21
NCSTN-201ENST00000294785 FOXD4L6Q3SYB3 417 aaPredicted RBP16.37■□□□□ 0.21
NCSTN-201ENST00000294785 FOXD4L3Q6VB84 417 aaPredicted RBP16.37■□□□□ 0.21
NCSTN-201ENST00000294785 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
NCSTN-201ENST00000294785 UBE2Q2Q8WVN8 375 aa16.37■□□□□ 0.21
NCSTN-201ENST00000294785 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
NCSTN-201ENST00000294785 RBM8AQ9Y5S9 174 aaKnown RBP16.37■□□□□ 0.21
NCSTN-201ENST00000294785 LARGE1O95461 756 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
NCSTN-201ENST00000294785 PDIA6Q15084 440 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms