RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MCM5P33992 734 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 CADPS2Q86UW7 1296 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 CCDC148Q8NFR7 591 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 BCL11BQ9C0K0 894 aaPredicted RBP14.87□□□□□ -0.03
PTCD1-201ENST00000292478 SOS1Q07889 1333 aaPredicted RBP14.87□□□□□ -0.03
PTCD1-201ENST00000292478 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 ABCC10Q5T3U5 1492 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 RHPN1Q8TCX5 695 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 UQCRFS1P1P0C7P4 283 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 CDC5LQ99459 802 aaKnown RBP14.87□□□□□ -0.03
PTCD1-201ENST00000292478 RIMS2Q9UQ26 1411 aa14.87□□□□□ -0.03
PTCD1-201ENST00000292478 KIF20AO95235 890 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 GJB2P29033 226 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 ZNF444Q8N0Y2 327 aaPredicted RBP14.86□□□□□ -0.03
PTCD1-201ENST00000292478 NEK1Q96PY6 1258 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 TSG101Q99816 390 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 IFIT3O14879 490 aaKnown RBP14.86□□□□□ -0.03
PTCD1-201ENST00000292478 TNIP1Q15025 636 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 CATIPQ7Z7H3 387 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 KIAA1328Q86T90 577 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 CCDC191Q8NCU4 936 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 ZSCAN16Q9H4T2 348 aaPredicted RBP14.86□□□□□ -0.03
PTCD1-201ENST00000292478 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
PTCD1-201ENST00000292478 PTPN14Q15678 1187 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 FKBP15Q5T1M5 1219 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 TAF4BQ92750 862 aa14.86□□□□□ -0.03
PTCD1-201ENST00000292478 KLHL40Q2TBA0 621 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 LDHCP07864 332 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 GSDMDP57764 484 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 BAG4O95429 457 aaKnown RBP14.85□□□□□ -0.03
PTCD1-201ENST00000292478 UBE2HP62256 183 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 ATP8B2P98198 1209 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 CCDC12Q8WUD4 166 aaPredicted RBP14.85□□□□□ -0.03
PTCD1-201ENST00000292478 UBXN4Q92575 508 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 UHRF1BP1Q6BDS2 1440 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
PTCD1-201ENST00000292478 TMEM266Q2M3C6 531 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 AKAP4Q5JQC9 854 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 ANKRD13DQ6ZTN6 518 aa14.85□□□□□ -0.03
PTCD1-201ENST00000292478 NCOA7Q8NI08 942 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 STX1AQ16623 288 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 KANK3Q6NY19 840 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 SNX21Q969T3 373 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 CEBPAP49715 358 aaPredicted RBP14.84□□□□□ -0.03
PTCD1-201ENST00000292478 GOLIM4O00461 696 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
PTCD1-201ENST00000292478 LDHAL6AQ6ZMR3 332 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
PTCD1-201ENST00000292478 KIF5BP33176 963 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 JAKMIP3Q5VZ66 844 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 ANKRD18AQ8IVF6 992 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 ANKIB1Q9P2G1 1089 aa14.84□□□□□ -0.03
PTCD1-201ENST00000292478 RANBP6O60518 1105 aaKnown RBP14.83□□□□□ -0.03
PTCD1-201ENST00000292478 SPA17Q15506 151 aa14.83□□□□□ -0.03
PTCD1-201ENST00000292478 SPTY2D1Q68D10 685 aaPredicted RBP14.83□□□□□ -0.03
PTCD1-201ENST00000292478 SKAP1Q86WV1 359 aa14.83□□□□□ -0.03
PTCD1-201ENST00000292478 KIF18AQ8NI77 898 aa14.83□□□□□ -0.03
PTCD1-201ENST00000292478 DMRT2Q9Y5R5 561 aa14.83□□□□□ -0.03
PTCD1-201ENST00000292478 CRACR2BQ8N4Y2 399 aaPredicted RBP14.83□□□□□ -0.04
PTCD1-201ENST00000292478 MPNDQ8N594 471 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 FSIP1Q8NA03 581 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 CNNM3Q8NE01 707 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 RRP9O43818 475 aaKnown RBP14.83□□□□□ -0.04
PTCD1-201ENST00000292478 MCM3P25205 808 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
PTCD1-201ENST00000292478 ZBTB3Q9H5J0 574 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 CLIP2Q9UDT6 1046 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 DESP17661 470 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 SDSP20132 328 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 PDE1AP54750 535 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 TESK2Q96S53 571 aa14.83□□□□□ -0.04
PTCD1-201ENST00000292478 CCDC194A0A1B0GVG4 234 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 UBE3BQ7Z3V4 1068 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 FLT4P35916 1363 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
PTCD1-201ENST00000292478 USP16Q9Y5T5 823 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 MPHOSPH10O00566 681 aaKnown RBP14.82□□□□□ -0.04
PTCD1-201ENST00000292478 KIF5CO60282 957 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 PCDHB15Q9Y5E8 787 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 KSR2Q6VAB6 950 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 NPC1L1Q9UHC9 1359 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 POTEJP0CG39 1038 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 NLRP5P59047 1200 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 EHMT1Q9H9B1 1298 aa14.82□□□□□ -0.04
PTCD1-201ENST00000292478 TRAPPC8Q9Y2L5 1435 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 PIP4K2BP78356 416 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 PIBF1Q8WXW3 757 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
PTCD1-201ENST00000292478 MEIS3Q99687 375 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 NPATQ14207 1427 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 PDE4BQ07343 736 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 CCDC178Q5BJE1 867 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 TMEM67Q5HYA8 995 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 ESYT1Q9BSJ8 1104 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 POLKQ9UBT6 870 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 TTC41PQ6P2S7 1318 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 AMPD3Q01432 767 aa14.81□□□□□ -0.04
PTCD1-201ENST00000292478 BAG3O95817 575 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms