RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PNISRQ8TF01 805 aaKnown RBP33.39■■■□□ 2.94
U2AF1-201ENST00000291552 DICER1Q9UPY3 1922 aaKnown RBP33.39■■■□□ 2.94
U2AF1-201ENST00000291552 NFKBIEO00221 500 aa33.38■■■□□ 2.93
U2AF1-201ENST00000291552 EIF4A1P60842 406 aaKnown RBP33.38■■■□□ 2.93
U2AF1-201ENST00000291552 ZNF622Q969S3 477 aaKnown RBP eCLIP33.37■■■□□ 2.93
U2AF1-201ENST00000291552 PDZRN3Q9UPQ7 1066 aa33.37■■■□□ 2.93
U2AF1-201ENST00000291552 PNNQ9H307 717 aaKnown RBP33.35■■■□□ 2.93
U2AF1-201ENST00000291552 RGL2O15211 777 aa33.34■■■□□ 2.93
U2AF1-201ENST00000291552 ST5P78524 1137 aa33.34■■■□□ 2.93
U2AF1-201ENST00000291552 HLFQ16534 295 aa33.34■■■□□ 2.93
U2AF1-201ENST00000291552 ZNF652Q9Y2D9 606 aa33.34■■■□□ 2.93
U2AF1-201ENST00000291552 MYBBP1AQ9BQG0 1328 aaKnown RBP33.33■■■□□ 2.93
U2AF1-201ENST00000291552 TOMM70O94826 608 aa33.33■■■□□ 2.93
U2AF1-201ENST00000291552 LMNB1P20700 586 aa33.33■■■□□ 2.93
U2AF1-201ENST00000291552 SRGNP10124 158 aa33.32■■■□□ 2.92
U2AF1-201ENST00000291552 NBPF5PQ86XG9 351 aaPredicted RBP33.32■■■□□ 2.92
U2AF1-201ENST00000291552 ZNF219Q9P2Y4 722 aaPredicted RBP33.31■■■□□ 2.92
U2AF1-201ENST00000291552 NIP7Q9Y221 180 aaKnown RBP eCLIP33.31■■■□□ 2.92
U2AF1-201ENST00000291552 ZC3H4Q9UPT8 1303 aaKnown RBP33.3■■■□□ 2.92
U2AF1-201ENST00000291552 NPHP1O15259 732 aa33.3■■■□□ 2.92
U2AF1-201ENST00000291552 C21orf2O43822 256 aa33.3■■■□□ 2.92
U2AF1-201ENST00000291552 KDM2BQ8NHM5 1336 aa33.29■■■□□ 2.92
U2AF1-201ENST00000291552 STYK1Q6J9G0 422 aa33.29■■■□□ 2.92
U2AF1-201ENST00000291552 RIPK4P57078 832 aa33.28■■■□□ 2.92
U2AF1-201ENST00000291552 TMPOP42166 694 aaKnown RBP33.27■■■□□ 2.92
U2AF1-201ENST00000291552 NGEFQ8N5V2 710 aa33.27■■■□□ 2.92
U2AF1-201ENST00000291552 PRPF40BQ6NWY9 871 aaKnown RBP33.26■■■□□ 2.91
U2AF1-201ENST00000291552 TTLL7Q6ZT98 887 aa33.26■■■□□ 2.91
U2AF1-201ENST00000291552 CNKSR1Q969H4 720 aa33.26■■■□□ 2.91
U2AF1-201ENST00000291552 MASTLQ96GX5 879 aa33.26■■■□□ 2.91
U2AF1-201ENST00000291552 RRAGCQ9HB90 399 aa33.25■■■□□ 2.91
U2AF1-201ENST00000291552 RRP7AQ9Y3A4 280 aaKnown RBP33.25■■■□□ 2.91
U2AF1-201ENST00000291552 KLRG2A4D1S0 409 aaPredicted RBP33.24■■■□□ 2.91
U2AF1-201ENST00000291552 FAM177BA6PVY3 158 aa33.24■■■□□ 2.91
U2AF1-201ENST00000291552 RBM46Q8TBY0 533 aaKnown RBP33.24■■■□□ 2.91
U2AF1-201ENST00000291552 TSPYL4Q9UJ04 414 aa33.24■■■□□ 2.91
U2AF1-201ENST00000291552 MAP3K15Q6ZN16 1313 aa33.24■■■□□ 2.91
U2AF1-201ENST00000291552 WDR90Q96KV7 1748 aa33.23■■■□□ 2.91
U2AF1-201ENST00000291552 CCDC146Q8IYE0 955 aa33.23■■■□□ 2.91
U2AF1-201ENST00000291552 ABCC12Q96J65 1359 aa33.22■■■□□ 2.91
U2AF1-201ENST00000291552 MYL6BP14649 208 aa33.22■■■□□ 2.91
U2AF1-201ENST00000291552 TPTE2Q6XPS3 522 aa33.22■■■□□ 2.91
U2AF1-201ENST00000291552 LTBP3Q9NS15 1303 aa33.22■■■□□ 2.91
U2AF1-201ENST00000291552 ERVV-1B6SEH8 477 aa33.21■■■□□ 2.91
U2AF1-201ENST00000291552 GLTPD2A6NH11 291 aa33.2■■■□□ 2.91
U2AF1-201ENST00000291552 LRP10Q7Z4F1 713 aa33.2■■■□□ 2.91
U2AF1-201ENST00000291552 C7orf43Q8WVR3 580 aa33.2■■■□□ 2.91
U2AF1-201ENST00000291552 ERBB4Q15303 1308 aa33.2■■■□□ 2.91
U2AF1-201ENST00000291552 NPR1P16066 1061 aa33.18■■■□□ 2.9
U2AF1-201ENST00000291552 TAOK3Q9H2K8 898 aa33.18■■■□□ 2.9
U2AF1-201ENST00000291552 ZBTB3Q9H5J0 574 aa33.18■■■□□ 2.9
U2AF1-201ENST00000291552 UBN2Q6ZU65 1347 aa33.18■■■□□ 2.9
U2AF1-201ENST00000291552 LMOD3Q0VAK6 560 aa33.17■■■□□ 2.9
U2AF1-201ENST00000291552 PDIA6Q15084 440 aa33.17■■■□□ 2.9
U2AF1-201ENST00000291552 KIF6Q6ZMV9 814 aa33.17■■■□□ 2.9
U2AF1-201ENST00000291552 C16orf71Q8IYS4 520 aaPredicted RBP33.17■■■□□ 2.9
U2AF1-201ENST00000291552 BABAM1Q9NWV8 329 aa33.17■■■□□ 2.9
U2AF1-201ENST00000291552 ANKRD36CQ5JPF3 1778 aa33.16■■■□□ 2.9
U2AF1-201ENST00000291552 APLP1P51693 650 aa33.15■■■□□ 2.9
U2AF1-201ENST00000291552 PROSER3Q2NL68 480 aa33.15■■■□□ 2.9
U2AF1-201ENST00000291552 NUTM1Q86Y26 1132 aa33.15■■■□□ 2.9
U2AF1-201ENST00000291552 IBTKQ9P2D0 1353 aaPredicted RBP33.15■■■□□ 2.9
U2AF1-201ENST00000291552 TRIM35Q9UPQ4 493 aa33.15■■■□□ 2.9
U2AF1-201ENST00000291552 RIC1Q4ADV7 1423 aa33.14■■■□□ 2.9
U2AF1-201ENST00000291552 RUNDC1Q96C34 613 aa33.14■■■□□ 2.9
U2AF1-201ENST00000291552 PRKRIP1Q9H875 184 aaPredicted RBP33.14■■■□□ 2.9
U2AF1-201ENST00000291552 GPTP24298 496 aa33.13■■■□□ 2.89
U2AF1-201ENST00000291552 NEUROD2Q15784 382 aa33.13■■■□□ 2.89
U2AF1-201ENST00000291552 ERFEQ4G0M1 354 aa33.13■■■□□ 2.89
U2AF1-201ENST00000291552 SOGA3Q5TF21 947 aa33.13■■■□□ 2.89
U2AF1-201ENST00000291552 OLFM4Q6UX06 510 aa33.13■■■□□ 2.89
U2AF1-201ENST00000291552 POTECB2RU33 542 aa33.12■■■□□ 2.89
U2AF1-201ENST00000291552 ANXA1P04083 346 aa33.12■■■□□ 2.89
U2AF1-201ENST00000291552 FSTL1Q12841 308 aa33.12■■■□□ 2.89
U2AF1-201ENST00000291552 WDR43Q15061 677 aaKnown RBP eCLIP33.12■■■□□ 2.89
U2AF1-201ENST00000291552 ADAMTS8Q9UP79 889 aa33.12■■■□□ 2.89
U2AF1-201ENST00000291552 EIF2S2P20042 333 aaKnown RBP33.11■■■□□ 2.89
U2AF1-201ENST00000291552 CRY2Q49AN0 593 aa33.11■■■□□ 2.89
U2AF1-201ENST00000291552 ZNF34Q8IZ26 560 aa33.11■■■□□ 2.89
U2AF1-201ENST00000291552 NYXQ9GZU5 481 aa33.11■■■□□ 2.89
U2AF1-201ENST00000291552 SNED1Q8TER0 1413 aa33.11■■■□□ 2.89
U2AF1-201ENST00000291552 KRT24Q2M2I5 525 aa33.1■■■□□ 2.89
U2AF1-201ENST00000291552 CCDC93Q567U6 631 aa33.1■■■□□ 2.89
U2AF1-201ENST00000291552 GIGYF2Q6Y7W6 1299 aaKnown RBP33.1■■■□□ 2.89
U2AF1-201ENST00000291552 CHL1O00533 1208 aa33.09■■■□□ 2.89
U2AF1-201ENST00000291552 VEGFAP15692 232 aaPredicted RBP33.09■■■□□ 2.89
U2AF1-201ENST00000291552 GTF2E1P29083 439 aaPredicted RBP33.09■■■□□ 2.89
U2AF1-201ENST00000291552 SUSD4Q5VX71 490 aa33.09■■■□□ 2.89
U2AF1-201ENST00000291552 LAMB2P55268 1798 aa33.07■■■□□ 2.88
U2AF1-201ENST00000291552 NTSR2O95665 410 aa33.07■■■□□ 2.88
U2AF1-201ENST00000291552 DNAJC5GQ8N7S2 189 aa33.07■■■□□ 2.88
U2AF1-201ENST00000291552 HTRA3P83110 453 aa33.05■■■□□ 2.88
U2AF1-201ENST00000291552 NECTIN2Q92692 538 aa33.05■■■□□ 2.88
U2AF1-201ENST00000291552 FKBP4Q02790 459 aaKnown RBP eCLIP33.04■■■□□ 2.88
U2AF1-201ENST00000291552 C3orf67Q6ZVT6 689 aa33.04■■■□□ 2.88
U2AF1-201ENST00000291552 SMC1BQ8NDV3 1235 aa33.04■■■□□ 2.88
U2AF1-201ENST00000291552 ALDH1B1P30837 517 aa33.02■■■□□ 2.88
U2AF1-201ENST00000291552 DPY19L2Q6NUT2 758 aa33.02■■■□□ 2.88
U2AF1-201ENST00000291552 SLC51AQ86UW1 340 aa33.02■■■□□ 2.88
U2AF1-201ENST00000291552 ZNF277Q9NRM2 450 aaPredicted RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms