RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SELENOOQ9BVL4 669 aa10.01□□□□□ -0.81
NIPBL-201ENST00000282516 ZNF652Q9Y2D9 606 aa10.01□□□□□ -0.81
NIPBL-201ENST00000282516 TBCAO75347 108 aaKnown RBP10.01□□□□□ -0.81
NIPBL-201ENST00000282516 LIG1P18858 919 aa10.01□□□□□ -0.81
NIPBL-201ENST00000282516 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
NIPBL-201ENST00000282516 SNX16P57768 344 aa10.01□□□□□ -0.81
NIPBL-201ENST00000282516 RSRC1Q96IZ7 334 aaKnown RBP10.01□□□□□ -0.81
NIPBL-201ENST00000282516 GOLGA8BA8MQT2 603 aa10.01□□□□□ -0.81
NIPBL-201ENST00000282516 KANK3Q6NY19 840 aa10.01□□□□□ -0.81
NIPBL-201ENST00000282516 TDRD9Q8NDG6 1382 aaKnown RBP10□□□□□ -0.81
NIPBL-201ENST00000282516 TMC6Q7Z403 805 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 CATIPQ7Z7H3 387 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 JAKMIP2Q96AA8 810 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 NAPBQ9H115 298 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 TCP11L1Q9NUJ3 509 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 CWC25Q9NXE8 425 aaPredicted RBP10□□□□□ -0.81
NIPBL-201ENST00000282516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10□□□□□ -0.811e-7■■■■□ 19.6
NIPBL-201ENST00000282516 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
NIPBL-201ENST00000282516 SH3BP5O60239 455 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 CIB2O75838 187 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 GGNBP2Q9H3C7 697 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 WIZO95785 1651 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 TCERG1LQ5VWI1 586 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 ATP2A2P16615 1042 aaKnown RBP10□□□□□ -0.81
NIPBL-201ENST00000282516 MTHFSP49914 203 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 CNNM3Q8NE01 707 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 RMND1Q9NWS8 449 aa10□□□□□ -0.81
NIPBL-201ENST00000282516 ZFP91Q96JP5 570 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-201ENST00000282516 UTP14AQ9BVJ6 771 aaKnown RBP9.99□□□□□ -0.81
NIPBL-201ENST00000282516 CAVIN4Q5BKX8 364 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 PRIMPOLQ96LW4 560 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 ARFGAP3Q9NP61 516 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-201ENST00000282516 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
NIPBL-201ENST00000282516 RAB11FIP3O75154 756 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 TUBB4BP68371 445 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 BICD1Q96G01 975 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 ADAMTS8Q9UP79 889 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 PRC1O43663 620 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 CCDC129Q6ZRS4 1044 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 IQCA1Q86XH1 822 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 EXOC1Q9NV70 894 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 MKNK2Q9HBH9 465 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 ANKRD30BQ9BXX2 1392 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 EXOSC9Q06265 439 aaKnown RBP9.99□□□□□ -0.81
NIPBL-201ENST00000282516 FEZ2Q9UHY8 353 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-201ENST00000282516 CFAP157Q5JU67 520 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 PTPRGP23470 1445 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 ATP2C2O75185 946 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 ATF7IPQ6VMQ6 1270 aa9.99□□□□□ -0.81
NIPBL-201ENST00000282516 NBPF1Q3BBV0 1214 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 FSIP1Q8NA03 581 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 CTAGE1Q96RT6 745 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 WDR63Q8IWG1 891 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 SETDB1Q15047 1291 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 ZNF428Q96B54 188 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 METTL24Q5JXM2 366 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 BACH2Q9BYV9 841 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 MYL6BP14649 208 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 MX1P20591 662 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 MYO1BO43795 1136 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 LRSAM1Q6UWE0 723 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 CCDC144CPQ8IYA2 1237 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 CCDC63Q8NA47 563 aa9.98□□□□□ -0.81
NIPBL-201ENST00000282516 AKR1B10O60218 316 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 CEP120Q8N960 986 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 GLRX3O76003 335 aaKnown RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 LACTBP83111 547 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 MAP3K12Q12852 859 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 SAMD15Q9P1V8 674 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 XPCQ01831 940 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 FERMT3Q86UX7 667 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 CTAGE9A4FU28 777 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 CASQ2O14958 399 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 DNAJC21Q5F1R6 531 aaKnown RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 STMN2Q93045 179 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 TRMT1Q9NXH9 659 aaKnown RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 SARNPP82979 210 aaKnown RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 CEP57Q86XR8 500 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 VCX3BQ9H321 246 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 AKNAQ7Z591 1439 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 TTLL12Q14166 644 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 PRPF40BQ6NWY9 871 aaKnown RBP9.97□□□□□ -0.81
NIPBL-201ENST00000282516 ZNF354CQ86Y25 554 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 FGD6Q6ZV73 1430 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 TOM1L2Q6ZVM7 507 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 LMBR1Q8WVP7 490 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 RSPH14Q9UHP6 348 aa9.97□□□□□ -0.81
NIPBL-201ENST00000282516 BTBD11A6QL63 1104 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 CNGA1P29973 690 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 IRX3P78415 501 aaPredicted RBP9.96□□□□□ -0.81
NIPBL-201ENST00000282516 BCAR3O75815 825 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 SLC5A1P13866 664 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 TSR2Q969E8 191 aaKnown RBP9.96□□□□□ -0.81
NIPBL-201ENST00000282516 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.81
NIPBL-201ENST00000282516 GNG11P61952 73 aa9.96□□□□□ -0.81
NIPBL-201ENST00000282516 TTC31Q49AM3 519 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms