RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 ESCO1Q5FWF5 840 aa9.12□□□□□ -0.95
TRIM6-201ENST00000278302 KCNF1Q9H3M0 494 aa9.12□□□□□ -0.95
TRIM6-201ENST00000278302 PHAXQ9H814 394 aaKnown RBP9.12□□□□□ -0.95
TRIM6-201ENST00000278302 SOS1Q07889 1333 aaPredicted RBP9.12□□□□□ -0.95
TRIM6-201ENST00000278302 TRHP20396 242 aaPredicted RBP9.11□□□□□ -0.95
TRIM6-201ENST00000278302 GABPB1Q06547 395 aaPredicted RBP9.11□□□□□ -0.95
TRIM6-201ENST00000278302 TERF2Q15554 542 aa9.11□□□□□ -0.95
TRIM6-201ENST00000278302 KIAA1524Q8TCG1 905 aa9.11□□□□□ -0.95
TRIM6-201ENST00000278302 DNAJC2Q99543 621 aaKnown RBP9.11□□□□□ -0.95
TRIM6-201ENST00000278302 ST7Q9NRC1 585 aa9.11□□□□□ -0.95
TRIM6-201ENST00000278302 CTIFO43310 598 aaKnown RBP9.11□□□□□ -0.95
TRIM6-201ENST00000278302 MCCP23508 829 aa9.11□□□□□ -0.95
TRIM6-201ENST00000278302 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
TRIM6-201ENST00000278302 IP6K1Q92551 441 aa9.11□□□□□ -0.95
TRIM6-201ENST00000278302 CWC22Q9HCG8 908 aaKnown RBP9.11□□□□□ -0.95
TRIM6-201ENST00000278302 FER1L4A9Z1Z3 1794 aa9.11□□□□□ -0.95
TRIM6-201ENST00000278302 CCDC66A2RUB6 948 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 IRX3P78415 501 aaPredicted RBP9.1□□□□□ -0.95
TRIM6-201ENST00000278302 C16orf45Q96MC5 204 aaPredicted RBP9.1□□□□□ -0.95
TRIM6-201ENST00000278302 USP44Q9H0E7 712 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 NEK4P51957 841 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 TEFQ10587 303 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 NBPF6Q5VWK0 638 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 LMOD2Q6P5Q4 547 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 CHMP4CQ96CF2 233 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 NBPF4Q96M43 638 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 SRCIN1Q9C0H9 1055 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 LGR6Q9HBX8 967 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 IL1RAPL2Q9NP60 686 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
TRIM6-201ENST00000278302 AP5Z1O43299 807 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 SURF6O75683 361 aaKnown RBP9.1□□□□□ -0.95
TRIM6-201ENST00000278302 ANO2Q9NQ90 1003 aa9.1□□□□□ -0.95
TRIM6-201ENST00000278302 ESYT1Q9BSJ8 1104 aa9.09□□□□□ -0.95
TRIM6-201ENST00000278302 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRIM6-201ENST00000278302 V9GYY5 206 aaPredicted RBP9.09□□□□□ -0.95
TRIM6-201ENST00000278302 SYAP1Q96A49 352 aaPredicted RBP9.09□□□□□ -0.95
TRIM6-201ENST00000278302 ZNF530Q6P9A1 599 aaPredicted RBP9.09□□□□□ -0.96
TRIM6-201ENST00000278302 NUTM1Q86Y26 1132 aa9.09□□□□□ -0.96
TRIM6-201ENST00000278302 KCNH5Q8NCM2 988 aa9.09□□□□□ -0.96
TRIM6-201ENST00000278302 SETD1BQ9UPS6 1966 aaKnown RBP9.08□□□□□ -0.96
TRIM6-201ENST00000278302 XRN1Q8IZH2 1706 aaKnown RBP9.08□□□□□ -0.96
TRIM6-201ENST00000278302 BTBD11A6QL63 1104 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 CHMLP26374 656 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 EIF4A1P60842 406 aaKnown RBP9.08□□□□□ -0.96
TRIM6-201ENST00000278302 PLEKHO1Q53GL0 409 aaPredicted RBP9.08□□□□□ -0.96
TRIM6-201ENST00000278302 PPP1R42Q7Z4L9 355 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 KIF18AQ8NI77 898 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 LRRC59Q96AG4 307 aaKnown RBP9.08□□□□□ -0.96
TRIM6-201ENST00000278302 TCHHQ07283 1943 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 SRGAP3O43295 1099 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 MPRIPQ6WCQ1 1025 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
TRIM6-201ENST00000278302 KCNQ3O43525 872 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 RAB11FIP3O75154 756 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 KDM4AO75164 1064 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 MAP4K4O95819 1239 aaPredicted RBP9.07□□□□□ -0.96
TRIM6-201ENST00000278302 OS9Q13438 667 aaPredicted RBP9.07□□□□□ -0.96
TRIM6-201ENST00000278302 C1orf141Q5JVX7 400 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 USP48Q86UV5 1035 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 SALL3Q9BXA9 1300 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 NWD1Q149M9 1564 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 PI4KAP2A4QPH2 592 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 ANXA1P04083 346 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 PI4KAP1Q8N8J0 262 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 SSH3Q8TE77 659 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 STAP2Q9UGK3 403 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 PHF14O94880 888 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 LRMPQ12912 555 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 AKAP4Q5JQC9 854 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 FAM184AQ8NB25 1140 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 SECISBP2LQ93073 1101 aaKnown RBP9.07□□□□□ -0.96
TRIM6-201ENST00000278302 TMX3Q96JJ7 454 aa9.07□□□□□ -0.96
TRIM6-201ENST00000278302 MORC2Q9Y6X9 1032 aaPredicted RBP9.07□□□□□ -0.96
TRIM6-201ENST00000278302 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
TRIM6-201ENST00000278302 PTGS1P23219 599 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 MCM2P49736 904 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 KRT222Q8N1A0 295 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 RHPN1Q8TCX5 695 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 FAM208AQ9UK61 1670 aaKnown RBP9.06□□□□□ -0.96
TRIM6-201ENST00000278302 LRRC37A3O60309 1634 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 TULP2O00295 520 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 NPHP1O15259 732 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 BRD1O95696 1058 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 SLC20A2Q08357 652 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 GIMAP6Q6P9H5 292 aa9.06□□□□□ -0.96
TRIM6-201ENST00000278302 KIF1BPQ96EK5 621 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 TMX1Q9H3N1 280 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 CEMIPQ8WUJ3 1361 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 HOXB7P09629 217 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 KMT5BQ4FZB7 885 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 AMOTQ4VCS5 1084 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 C9orf78Q9NZ63 289 aaPredicted RBP9.05□□□□□ -0.96
TRIM6-201ENST00000278302 CALCOCO1Q9P1Z2 691 aa9.05□□□□□ -0.96
TRIM6-201ENST00000278302 PALD1Q9ULE6 856 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms