RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 TTC16Q8NEE8 873 aa13.77□□□□□ -0.2
SHPRH-201ENST00000275233 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.2
SHPRH-201ENST00000275233 TDRD12Q587J7 1177 aaKnown RBP13.77□□□□□ -0.2
SHPRH-201ENST00000275233 SLF2Q8IX21 1173 aa13.77□□□□□ -0.2
SHPRH-201ENST00000275233 ADGRL1O94910 1474 aa13.77□□□□□ -0.2
SHPRH-201ENST00000275233 EZRP15311 586 aaKnown RBP13.77□□□□□ -0.21
SHPRH-201ENST00000275233 CASQ1P31415 396 aa13.77□□□□□ -0.21
SHPRH-201ENST00000275233 IDI1Q13907 227 aa13.77□□□□□ -0.21
SHPRH-201ENST00000275233 ALDH1L2Q3SY69 923 aa13.77□□□□□ -0.21
SHPRH-201ENST00000275233 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 KAT14Q9H8E8 782 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 BCCIPQ9P287 314 aaKnown RBP eCLIP13.76□□□□□ -0.21
SHPRH-201ENST00000275233 SSFA2P28290 1259 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
SHPRH-201ENST00000275233 PI4KAP2A4QPH2 592 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 PI4KAP1Q8N8J0 262 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 TRMT1Q9NXH9 659 aaKnown RBP13.76□□□□□ -0.21
SHPRH-201ENST00000275233 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
SHPRH-201ENST00000275233 GJB2P29033 226 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 IFNL2Q8IZJ0 200 aa13.76□□□□□ -0.21
SHPRH-201ENST00000275233 CDC5LQ99459 802 aaKnown RBP13.76□□□□□ -0.21
SHPRH-201ENST00000275233 RNF41Q9H4P4 317 aaPredicted RBP13.76□□□□□ -0.21
SHPRH-201ENST00000275233 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 TOP1P11387 765 aaKnown RBP13.75□□□□□ -0.21
SHPRH-201ENST00000275233 NBPF6Q5VWK0 638 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
SHPRH-201ENST00000275233 FSIP1Q8NA03 581 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 NBPF4Q96M43 638 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 MAGI1Q96QZ7 1491 aaPredicted RBP13.75□□□□□ -0.21
SHPRH-201ENST00000275233 BAG4O95429 457 aaKnown RBP13.75□□□□□ -0.21
SHPRH-201ENST00000275233 IDEP14735 1019 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 ST5P78524 1137 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 ANO10Q9NW15 660 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 DYDC1Q8WWB3 177 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 RAB34Q9BZG1 259 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 NKTRP30414 1462 aaKnown RBP13.75□□□□□ -0.21
SHPRH-201ENST00000275233 PLB1Q6P1J6 1458 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 KIF14Q15058 1648 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 TRIM27P14373 513 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 CETN2P41208 172 aa13.75□□□□□ -0.21
SHPRH-201ENST00000275233 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
SHPRH-201ENST00000275233 PICALMQ13492 652 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 PPP1R42Q7Z4L9 355 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 NOS1P29475 1434 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 SYCP3Q8IZU3 236 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 FERMT2Q96AC1 680 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 GSTTP1A0A1W2PQM5 241 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHPRH-201ENST00000275233 MTIF2P46199 727 aaKnown RBP13.74□□□□□ -0.21
SHPRH-201ENST00000275233 SLC39A6Q13433 755 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 MFSD6Q6ZSS7 791 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 ACEP12821 1306 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 LRRC2Q9BYS8 371 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 MBIPQ9NS73 344 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
SHPRH-201ENST00000275233 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
SHPRH-201ENST00000275233 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
SHPRH-201ENST00000275233 C8orf37Q96NL8 207 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 CLIP2Q9UDT6 1046 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 KIF4BQ2VIQ3 1234 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 DNAI2Q9GZS0 605 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 LIMCH1Q9UPQ0 1083 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 PHAXQ9H814 394 aaKnown RBP13.73□□□□□ -0.21
SHPRH-201ENST00000275233 GOLGA6L7A0A1B0GV03 622 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 BAG3O95817 575 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 METAP2P50579 478 aaKnown RBP eCLIP13.73□□□□□ -0.21
SHPRH-201ENST00000275233 UBXN4Q92575 508 aa13.73□□□□□ -0.21
SHPRH-201ENST00000275233 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
SHPRH-201ENST00000275233 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
SHPRH-201ENST00000275233 KIF5CO60282 957 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 CTNNA2P26232 953 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 PDE4BQ07343 736 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 LUZP1Q86V48 1076 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 STX8Q9UNK0 236 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 HLA-DOAP06340 250 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 CHPF2Q9P2E5 772 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 PRC1O43663 620 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 PRPF4BQ13523 1007 aaKnown RBP13.72□□□□□ -0.21
SHPRH-201ENST00000275233 PTPN14Q15678 1187 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 BICD1Q96G01 975 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 IARSP41252 1262 aaKnown RBP13.72□□□□□ -0.21
SHPRH-201ENST00000275233 TTF1Q15361 905 aaPredicted RBP13.72□□□□□ -0.21
SHPRH-201ENST00000275233 CLEC11AQ9Y240 323 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 LRPPRCP42704 1394 aaKnown RBP13.72□□□□□ -0.21
SHPRH-201ENST00000275233 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
SHPRH-201ENST00000275233 VPS36Q86VN1 386 aa13.71□□□□□ -0.21
SHPRH-201ENST00000275233 ABCC5O15440 1437 aa13.71□□□□□ -0.21
SHPRH-201ENST00000275233 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms