RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PHF14O94880 888 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 TRIM27P14373 513 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
SKP2-201ENST00000274254 KSR2Q6VAB6 950 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 PI4KAP1Q8N8J0 262 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 PLBD2Q8NHP8 589 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 QSER1Q2KHR3 1735 aa21.92■■□□□ 1.1
SKP2-201ENST00000274254 KIF6Q6ZMV9 814 aa21.91■■□□□ 1.1
SKP2-201ENST00000274254 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.91■■□□□ 1.1
SKP2-201ENST00000274254 API5Q9BZZ5 524 aaKnown RBP21.91■■□□□ 1.1
SKP2-201ENST00000274254 ERVV-1B6SEH8 477 aa21.9■■□□□ 1.1
SKP2-201ENST00000274254 PLIN1O60240 522 aa21.9■■□□□ 1.1
SKP2-201ENST00000274254 CAMTA2O94983 1202 aa21.9■■□□□ 1.1
SKP2-201ENST00000274254 PNPLA7Q6ZV29 1317 aa21.9■■□□□ 1.1
SKP2-201ENST00000274254 FLAD1Q8NFF5 587 aa21.9■■□□□ 1.1
SKP2-201ENST00000274254 NARFQ9UHQ1 456 aa21.9■■□□□ 1.1
SKP2-201ENST00000274254 BCORQ6W2J9 1755 aa21.9■■□□□ 1.1
SKP2-201ENST00000274254 ARFGEF2Q9Y6D5 1785 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 F6X3S4 739 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 RGL2O15211 777 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 RIC3Q7Z5B4 369 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 ARXQ96QS3 562 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 ZBTB3Q9H5J0 574 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 TNNQ9UQP3 1299 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 MAP3K2Q9Y2U5 619 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 SCN7AQ01118 1682 aa21.89■■□□□ 1.09
SKP2-201ENST00000274254 USP42Q9H9J4 1324 aaKnown RBP21.88■■□□□ 1.09
SKP2-201ENST00000274254 RFC4P35249 363 aa21.88■■□□□ 1.09
SKP2-201ENST00000274254 COL23A1Q86Y22 540 aaPredicted RBP21.88■■□□□ 1.09
SKP2-201ENST00000274254 DNAAF4Q8WXU2 420 aa21.88■■□□□ 1.09
SKP2-201ENST00000274254 ABCC4O15439 1325 aa21.87■■□□□ 1.09
SKP2-201ENST00000274254 HLFQ16534 295 aa21.86■■□□□ 1.09
SKP2-201ENST00000274254 GIGYF2Q6Y7W6 1299 aaKnown RBP21.86■■□□□ 1.09
SKP2-201ENST00000274254 METTL22Q9BUU2 404 aaPredicted RBP21.86■■□□□ 1.09
SKP2-201ENST00000274254 SRP68Q9UHB9 627 aaKnown RBP21.86■■□□□ 1.09
SKP2-201ENST00000274254 PXDNLA1KZ92 1463 aa21.86■■□□□ 1.09
SKP2-201ENST00000274254 NUP98P52948 1817 aa21.86■■□□□ 1.09
SKP2-201ENST00000274254 ZPR1O75312 459 aa21.85■■□□□ 1.09
SKP2-201ENST00000274254 RLBP1P12271 317 aa21.85■■□□□ 1.09
SKP2-201ENST00000274254 PDE3AQ14432 1141 aa21.85■■□□□ 1.09
SKP2-201ENST00000274254 CLEC4GQ6UXB4 293 aa21.85■■□□□ 1.09
SKP2-201ENST00000274254 DZIP1LQ8IYY4 767 aaKnown RBP21.85■■□□□ 1.09
SKP2-201ENST00000274254 CLUAP1Q96AJ1 413 aa21.85■■□□□ 1.09
SKP2-201ENST00000274254 BCL2L12Q9HB09 334 aa21.85■■□□□ 1.09
SKP2-201ENST00000274254 USPL1Q5W0Q7 1092 aa21.85■■□□□ 1.09
SKP2-201ENST00000274254 MS4A1P11836 297 aa21.84■■□□□ 1.09
SKP2-201ENST00000274254 ATP10DQ9P241 1426 aa21.84■■□□□ 1.09
SKP2-201ENST00000274254 N4BP2Q86UW6 1770 aaPredicted RBP21.83■■□□□ 1.09
SKP2-201ENST00000274254 TCIRG1Q13488 830 aa21.83■■□□□ 1.09
SKP2-201ENST00000274254 BEND3Q5T5X7 828 aa21.83■■□□□ 1.09
SKP2-201ENST00000274254 C20orf194Q5TEA3 1177 aa21.83■■□□□ 1.09
SKP2-201ENST00000274254 SLC4A10Q6U841 1118 aa21.83■■□□□ 1.09
SKP2-201ENST00000274254 FTSJ3Q8IY81 847 aaKnown RBP21.83■■□□□ 1.09
SKP2-201ENST00000274254 ZNF652Q9Y2D9 606 aa21.83■■□□□ 1.09
SKP2-201ENST00000274254 GYS1P13807 737 aa21.82■■□□□ 1.08
SKP2-201ENST00000274254 HSP90AB3PQ58FF7 597 aa21.82■■□□□ 1.08
SKP2-201ENST00000274254 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
SKP2-201ENST00000274254 PANK1Q8TE04 598 aa21.82■■□□□ 1.08
SKP2-201ENST00000274254 SOCS7O14512 581 aa21.81■■□□□ 1.08
SKP2-201ENST00000274254 IGKV5-2P06315 115 aa21.81■■□□□ 1.08
SKP2-201ENST00000274254 LINS1Q8NG48 757 aa21.81■■□□□ 1.08
SKP2-201ENST00000274254 MYD88Q99836 296 aa21.81■■□□□ 1.08
SKP2-201ENST00000274254 ANKRD36CQ5JPF3 1778 aa21.81■■□□□ 1.08
SKP2-201ENST00000274254 CCT4P50991 539 aaKnown RBP21.8■■□□□ 1.08
SKP2-201ENST00000274254 NEXNQ0ZGT2 675 aa21.8■■□□□ 1.08
SKP2-201ENST00000274254 TMEM57Q8N5G2 664 aa21.8■■□□□ 1.08
SKP2-201ENST00000274254 ISCA1Q9BUE6 129 aa21.8■■□□□ 1.08
SKP2-201ENST00000274254 TRIM28Q13263 835 aaKnown RBP21.8■■□□□ 1.08
SKP2-201ENST00000274254 FKBP8Q14318 412 aa21.8■■□□□ 1.08
SKP2-201ENST00000274254 ZNF34Q8IZ26 560 aa21.8■■□□□ 1.08
SKP2-201ENST00000274254 PDGFDQ9GZP0 370 aaPredicted RBP21.8■■□□□ 1.08
SKP2-201ENST00000274254 IBTKQ9P2D0 1353 aaPredicted RBP21.79■■□□□ 1.08
SKP2-201ENST00000274254 NEURL1BA8MQ27 555 aa21.79■■□□□ 1.08
SKP2-201ENST00000274254 ATP5J2-PTCD1G3V325 749 aa21.79■■□□□ 1.08
SKP2-201ENST00000274254 MSH5O43196 834 aa21.79■■□□□ 1.08
SKP2-201ENST00000274254 SRCIN1Q9C0H9 1055 aa21.79■■□□□ 1.08
SKP2-201ENST00000274254 ALDH1L1O75891 902 aa21.78■■□□□ 1.08
SKP2-201ENST00000274254 R3HDM1Q15032 1099 aaKnown RBP21.78■■□□□ 1.08
SKP2-201ENST00000274254 CWF19L2Q2TBE0 894 aaKnown RBP21.78■■□□□ 1.08
SKP2-201ENST00000274254 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
SKP2-201ENST00000274254 UBN2Q6ZU65 1347 aa21.78■■□□□ 1.08
SKP2-201ENST00000274254 CASZ1Q86V15 1759 aa21.77■■□□□ 1.08
SKP2-201ENST00000274254 GPTP24298 496 aa21.76■■□□□ 1.07
SKP2-201ENST00000274254 MVPQ14764 893 aaKnown RBP21.76■■□□□ 1.07
SKP2-201ENST00000274254 CCDC191Q8NCU4 936 aa21.76■■□□□ 1.07
SKP2-201ENST00000274254 NIP7Q9Y221 180 aaKnown RBP eCLIP21.76■■□□□ 1.07
SKP2-201ENST00000274254 AFDNP55196 1824 aaKnown RBP21.76■■□□□ 1.07
SKP2-201ENST00000274254 NLRP10Q86W26 655 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 ITPRIPQ8IWB1 547 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 SLC16A10Q8TF71 515 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 COG6Q9Y2V7 657 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 TM4SF1P30408 202 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 GCKRQ14397 625 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 NFIXQ14938 502 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 COL24A1Q17RW2 1714 aa21.75■■□□□ 1.07
SKP2-201ENST00000274254 PARP10Q53GL7 1025 aa21.74■■□□□ 1.07
SKP2-201ENST00000274254 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
SKP2-201ENST00000274254 CWC25Q9NXE8 425 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms