RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TBC1D8O95759 1140 aa10.86□□□□□ -0.67
PDGFC-201ENST00000274071 SSR1P43307 286 aaKnown RBP10.86□□□□□ -0.67
PDGFC-201ENST00000274071 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
PDGFC-201ENST00000274071 ARGLU1Q9NWB6 273 aaPredicted RBP10.86□□□□□ -0.67
PDGFC-201ENST00000274071 TRMT1Q9NXH9 659 aaKnown RBP10.86□□□□□ -0.67
PDGFC-201ENST00000274071 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
PDGFC-201ENST00000274071 KIF2AO00139 706 aaPredicted RBP10.86□□□□□ -0.67
PDGFC-201ENST00000274071 CALRP27797 417 aaKnown RBP10.86□□□□□ -0.67
PDGFC-201ENST00000274071 TTLL5Q6EMB2 1281 aa10.86□□□□□ -0.67
PDGFC-201ENST00000274071 TMEM57Q8N5G2 664 aa10.86□□□□□ -0.67
PDGFC-201ENST00000274071 MNAT1P51948 309 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 UBE2HP62256 183 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 ZKSCAN8Q15776 578 aaPredicted RBP10.85□□□□□ -0.67
PDGFC-201ENST00000274071 CCDC93Q567U6 631 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 FILIP1Q7Z7B0 1213 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 PLA2G4DQ86XP0 818 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 WDR63Q8IWG1 891 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 FAM200AQ8TCP9 573 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 TBC1D22AQ8WUA7 517 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 CCDC34Q96HJ3 373 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 CNPY2Q9Y2B0 182 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 LRRC8AQ8IWT6 810 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 PHF23Q9BUL5 403 aaPredicted RBP10.85□□□□□ -0.67
PDGFC-201ENST00000274071 TRIM5Q9C035 493 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 TSPOAP1O95153 1857 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 IFT172Q9UG01 1749 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 ELP1O95163 1332 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 DIP2BQ9P265 1576 aa10.85□□□□□ -0.67
PDGFC-201ENST00000274071 NOS1P29475 1434 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 TTC36A6NLP5 189 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 ZNF75DP51815 510 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 FAXDC2Q96IV6 333 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 BSDC1Q9NW68 430 aaPredicted RBP10.84□□□□□ -0.67
PDGFC-201ENST00000274071 ORC3Q9UBD5 711 aaPredicted RBP10.84□□□□□ -0.67
PDGFC-201ENST00000274071 ADGRB3O60242 1522 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 CAMSAP1Q5T5Y3 1602 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 SMC2O95347 1197 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 CUL4AQ13619 759 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 ARID5BQ14865 1188 aa10.84□□□□□ -0.67
PDGFC-201ENST00000274071 PLEKHO1Q53GL0 409 aaPredicted RBP10.84□□□□□ -0.67
PDGFC-201ENST00000274071 SRRTQ9BXP5 876 aaKnown RBP10.84□□□□□ -0.67
PDGFC-201ENST00000274071 H0YHG0 523 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 RPS6KA5O75582 802 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 NEK4P51957 841 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 SARNPP82979 210 aaKnown RBP10.83□□□□□ -0.68
PDGFC-201ENST00000274071 TTC19Q6DKK2 380 aaPredicted RBP10.83□□□□□ -0.68
PDGFC-201ENST00000274071 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
PDGFC-201ENST00000274071 EFCAB13Q8IY85 973 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 CLIP2Q9UDT6 1046 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 TPM1P09493 284 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 TADA2BQ86TJ2 420 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 MIEF2Q96C03 454 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 TERF2IPQ9NYB0 399 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 TCHHQ07283 1943 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 NRXN1Q9ULB1 1477 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 SKILP12757 684 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 NBPF6Q5VWK0 638 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 NAIF1Q69YI7 327 aaPredicted RBP10.83□□□□□ -0.68
PDGFC-201ENST00000274071 NBPF5PQ86XG9 351 aaPredicted RBP10.83□□□□□ -0.68
PDGFC-201ENST00000274071 CCAR2Q8N163 923 aaKnown RBP10.83□□□□□ -0.68
PDGFC-201ENST00000274071 TCP11L2Q8N4U5 519 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 UBXN4Q92575 508 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 NBPF4Q96M43 638 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 SRCIN1Q9C0H9 1055 aa10.83□□□□□ -0.68
PDGFC-201ENST00000274071 SIGLEC1Q9BZZ2 1709 aa10.82□□□□□ -0.68
PDGFC-201ENST00000274071 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
PDGFC-201ENST00000274071 ZC3H12AQ5D1E8 599 aaKnown RBP10.82□□□□□ -0.68
PDGFC-201ENST00000274071 MICALL1Q8N3F8 863 aa10.82□□□□□ -0.68
PDGFC-201ENST00000274071 ZNF526Q8TF50 670 aaPredicted RBP10.82□□□□□ -0.68
PDGFC-201ENST00000274071 KAT2BQ92831 832 aa10.82□□□□□ -0.68
PDGFC-201ENST00000274071 ITFG2Q969R8 447 aa10.82□□□□□ -0.68
PDGFC-201ENST00000274071 INTS4Q96HW7 963 aaKnown RBP10.82□□□□□ -0.68
PDGFC-201ENST00000274071 NOB1Q9ULX3 412 aaKnown RBP10.82□□□□□ -0.68
PDGFC-201ENST00000274071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDGFC-201ENST00000274071 RPGRIP1LQ68CZ1 1315 aa10.82□□□□□ -0.68
PDGFC-201ENST00000274071 C21orf2O43822 256 aa10.82□□□□□ -0.68
PDGFC-201ENST00000274071 ZRSR1Q15695 479 aaKnown RBP10.82□□□□□ -0.68
PDGFC-201ENST00000274071 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 H3BQF6 201 aa10.81□□□□□ -0.68
PDGFC-201ENST00000274071 HNRNPH1P31943 449 aaKnown RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 SSH1Q8WYL5 1049 aa10.81□□□□□ -0.68
PDGFC-201ENST00000274071 MRVI1Q9Y6F6 885 aa10.81□□□□□ -0.68
PDGFC-201ENST00000274071 RPAP1Q9BWH6 1393 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 A0A087WUV0 522 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 INTS3Q68E01 1043 aaKnown RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 CC2D1AQ6P1N0 951 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 SYTL4Q96C24 671 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 C14orf93Q9H972 538 aaKnown RBP10.81□□□□□ -0.68
PDGFC-201ENST00000274071 PPLO60437 1756 aa10.81□□□□□ -0.68
PDGFC-201ENST00000274071 IDI1Q13907 227 aa10.8□□□□□ -0.68
PDGFC-201ENST00000274071 OTUD6BQ8N6M0 293 aa10.8□□□□□ -0.68
PDGFC-201ENST00000274071 CBX8Q9HC52 389 aa10.8□□□□□ -0.68
PDGFC-201ENST00000274071 ANKRD33BA6NCL7 494 aa10.8□□□□□ -0.68
PDGFC-201ENST00000274071 NEBLO76041 1014 aa10.8□□□□□ -0.68
PDGFC-201ENST00000274071 LIG1P18858 919 aa10.8□□□□□ -0.68
PDGFC-201ENST00000274071 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
PDGFC-201ENST00000274071 MKRN1Q9UHC7 482 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms