RNA–Protein interactions for RNA: ENST00000273077.8

PNKD-203, Transcript of PNKD, MBL domain containing, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PNKD, Length 3,021 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-203ENST00000273077 RAB11FIP3O75154 756 aa16.85■□□□□ 0.29
PNKD-203ENST00000273077 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
PNKD-203ENST00000273077 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
PNKD-203ENST00000273077 LARGE1O95461 756 aa16.85■□□□□ 0.29
PNKD-203ENST00000273077 TCEANC2Q96MN5 208 aa16.85■□□□□ 0.29
PNKD-203ENST00000273077 DIAPH3Q9NSV4 1193 aa16.85■□□□□ 0.29
PNKD-203ENST00000273077 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
PNKD-203ENST00000273077 IFIT2P09913 472 aaKnown RBP16.84■□□□□ 0.29
PNKD-203ENST00000273077 CSB-PGBD3P0DP91 1061 aa16.84■□□□□ 0.29
PNKD-203ENST00000273077 HSPA4P34932 840 aa16.84■□□□□ 0.29
PNKD-203ENST00000273077 ADCK5Q3MIX3 580 aa16.84■□□□□ 0.29
PNKD-203ENST00000273077 CLASRPQ8N2M8 674 aaKnown RBP16.84■□□□□ 0.29
PNKD-203ENST00000273077 EDC3Q96F86 508 aaKnown RBP16.84■□□□□ 0.29
PNKD-203ENST00000273077 CASTP20810 708 aaKnown RBP16.84■□□□□ 0.29
PNKD-203ENST00000273077 AK2P54819 239 aa16.84■□□□□ 0.29
PNKD-203ENST00000273077 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
PNKD-203ENST00000273077 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
PNKD-203ENST00000273077 TUBGCP6Q96RT7 1819 aa16.84■□□□□ 0.29
PNKD-203ENST00000273077 KIAA1211Q6ZU35 1233 aa16.83■□□□□ 0.29
PNKD-203ENST00000273077 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.29
PNKD-203ENST00000273077 MPNDQ8N594 471 aa16.83■□□□□ 0.29
PNKD-203ENST00000273077 KAZALD1Q96I82 304 aa16.83■□□□□ 0.29
PNKD-203ENST00000273077 FAM227BQ96M60 508 aa16.83■□□□□ 0.29
PNKD-203ENST00000273077 CHD2O14647 1828 aaKnown RBP16.83■□□□□ 0.29
PNKD-203ENST00000273077 CHGBP05060 677 aa16.83■□□□□ 0.28
PNKD-203ENST00000273077 PTMSP20962 102 aa16.83■□□□□ 0.28
PNKD-203ENST00000273077 KSR2Q6VAB6 950 aa16.83■□□□□ 0.28
PNKD-203ENST00000273077 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.28
PNKD-203ENST00000273077 BRD1O95696 1058 aa16.83■□□□□ 0.28
PNKD-203ENST00000273077 BOLA2Q9H3K6 86 aa16.83■□□□□ 0.28
PNKD-203ENST00000273077 RAD50Q92878 1312 aa16.82■□□□□ 0.28
PNKD-203ENST00000273077 AMOTQ4VCS5 1084 aa16.82■□□□□ 0.28
PNKD-203ENST00000273077 ARID3AQ99856 593 aa16.82■□□□□ 0.28
PNKD-203ENST00000273077 CUL4AQ13619 759 aa16.82■□□□□ 0.28
PNKD-203ENST00000273077 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
PNKD-203ENST00000273077 EPHA10Q5JZY3 1008 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
PNKD-203ENST00000273077 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 GRM8O00222 908 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
PNKD-203ENST00000273077 SASH1O94885 1247 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 RAPGEF4Q8WZA2 1011 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
PNKD-203ENST00000273077 MYD88Q99836 296 aa16.81■□□□□ 0.28
PNKD-203ENST00000273077 ZHX1Q9UKY1 873 aaPredicted RBP16.81■□□□□ 0.28
PNKD-203ENST00000273077 IGKV5-2P06315 115 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 KCNJ4P48050 445 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 ANAPC15P60006 121 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 CCDC83Q8IWF9 413 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 ZNF496Q96IT1 587 aaPredicted RBP16.8■□□□□ 0.28
PNKD-203ENST00000273077 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
PNKD-203ENST00000273077 TAF6LQ9Y6J9 622 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 ECHDC1Q9NTX5 307 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 ERBB3P21860 1342 aa16.8■□□□□ 0.28
PNKD-203ENST00000273077 GLRX3O76003 335 aaKnown RBP16.79■□□□□ 0.28
PNKD-203ENST00000273077 HOXB7P09629 217 aa16.79■□□□□ 0.28
PNKD-203ENST00000273077 PDIA6Q15084 440 aa16.79■□□□□ 0.28
PNKD-203ENST00000273077 CNPY2Q9Y2B0 182 aa16.79■□□□□ 0.28
PNKD-203ENST00000273077 KDM3BQ7LBC6 1761 aa16.79■□□□□ 0.28
PNKD-203ENST00000273077 RGPD5Q99666 1765 aa16.79■□□□□ 0.28
PNKD-203ENST00000273077 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
PNKD-203ENST00000273077 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
PNKD-203ENST00000273077 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
PNKD-203ENST00000273077 MCM2P49736 904 aa16.78■□□□□ 0.28
PNKD-203ENST00000273077 ZNF445P59923 1031 aa16.78■□□□□ 0.28
PNKD-203ENST00000273077 ISY1Q9ULR0 285 aaKnown RBP16.78■□□□□ 0.28
PNKD-203ENST00000273077 AOX1Q06278 1338 aa16.78■□□□□ 0.28
PNKD-203ENST00000273077 NPHP4O75161 1426 aaPredicted RBP16.78■□□□□ 0.28
PNKD-203ENST00000273077 USP48Q86UV5 1035 aa16.78■□□□□ 0.28
PNKD-203ENST00000273077 G3BP1Q13283 466 aaKnown RBP eCLIP16.78■□□□□ 0.28
PNKD-203ENST00000273077 TCHHQ07283 1943 aa16.77■□□□□ 0.28
PNKD-203ENST00000273077 NMIQ13287 307 aaPredicted RBP16.77■□□□□ 0.28
PNKD-203ENST00000273077 FIBPO43427 364 aa16.77■□□□□ 0.27
PNKD-203ENST00000273077 HSP90AB4PQ58FF6 505 aa16.77■□□□□ 0.27
PNKD-203ENST00000273077 LINS1Q8NG48 757 aa16.77■□□□□ 0.27
PNKD-203ENST00000273077 RPAP1Q9BWH6 1393 aaPredicted RBP16.76■□□□□ 0.27
PNKD-203ENST00000273077 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
PNKD-203ENST00000273077 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
PNKD-203ENST00000273077 A0A0D9SFI3 127 aa16.76■□□□□ 0.27
PNKD-203ENST00000273077 TTC14Q96N46 770 aa16.76■□□□□ 0.27
PNKD-203ENST00000273077 CCDC173Q0VFZ6 552 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 FSD1Q9BTV5 496 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 CHMP3Q9Y3E7 222 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 PAXIP1Q6ZW49 1069 aaPredicted RBP16.75■□□□□ 0.27
PNKD-203ENST00000273077 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
PNKD-203ENST00000273077 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
PNKD-203ENST00000273077 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
PNKD-203ENST00000273077 SYT1P21579 422 aa16.74■□□□□ 0.27
PNKD-203ENST00000273077 INTS4Q96HW7 963 aaKnown RBP16.74■□□□□ 0.27
PNKD-203ENST00000273077 SMC3Q9UQE7 1217 aa16.74■□□□□ 0.27
PNKD-203ENST00000273077 LMO7Q8WWI1 1683 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms