RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MAP3K5Q99683 1374 aa20.19■□□□□ 0.82
SQLE-201ENST00000265896 BTBD11A6QL63 1104 aa20.19■□□□□ 0.82
SQLE-201ENST00000265896 ZNF500O60304 480 aaPredicted RBP20.19■□□□□ 0.82
SQLE-201ENST00000265896 ANAPC15P60006 121 aa20.19■□□□□ 0.82
SQLE-201ENST00000265896 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
SQLE-201ENST00000265896 AP5Z1O43299 807 aa20.18■□□□□ 0.82
SQLE-201ENST00000265896 LIMCH1Q9UPQ0 1083 aa20.18■□□□□ 0.82
SQLE-201ENST00000265896 USP31Q70CQ4 1352 aa20.18■□□□□ 0.82
SQLE-201ENST00000265896 MON2Q7Z3U7 1717 aa20.18■□□□□ 0.82
SQLE-201ENST00000265896 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
SQLE-201ENST00000265896 PDRG1Q9NUG6 133 aa20.18■□□□□ 0.82
SQLE-201ENST00000265896 SPATA31D1Q6ZQQ2 1576 aa20.17■□□□□ 0.82
SQLE-201ENST00000265896 ZNF530Q6P9A1 599 aaPredicted RBP20.17■□□□□ 0.82
SQLE-201ENST00000265896 CKAP2LQ8IYA6 745 aa20.17■□□□□ 0.82
SQLE-201ENST00000265896 IFIT2P09913 472 aaKnown RBP20.17■□□□□ 0.82
SQLE-201ENST00000265896 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
SQLE-201ENST00000265896 PKNOX2Q96KN3 472 aa20.17■□□□□ 0.82
SQLE-201ENST00000265896 ITSN1Q15811 1721 aa20.16■□□□□ 0.82
SQLE-201ENST00000265896 F13A1P00488 732 aa20.16■□□□□ 0.82
SQLE-201ENST00000265896 ME3Q16798 604 aa20.16■□□□□ 0.82
SQLE-201ENST00000265896 TTC14Q96N46 770 aa20.16■□□□□ 0.82
SQLE-201ENST00000265896 PDCL3Q9H2J4 239 aa20.16■□□□□ 0.82
SQLE-201ENST00000265896 MYL6BP14649 208 aa20.16■□□□□ 0.82
SQLE-201ENST00000265896 KIAA2012Q0VF49 1180 aa20.16■□□□□ 0.82
SQLE-201ENST00000265896 CLASRPQ8N2M8 674 aaKnown RBP20.16■□□□□ 0.82
SQLE-201ENST00000265896 KDRP35968 1356 aa20.15■□□□□ 0.82
SQLE-201ENST00000265896 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
SQLE-201ENST00000265896 HYPKQ9NX55 129 aa20.15■□□□□ 0.82
SQLE-201ENST00000265896 CEBPZQ03701 1054 aaKnown RBP20.15■□□□□ 0.82
SQLE-201ENST00000265896 DDX11Q96FC9 970 aa20.15■□□□□ 0.82
SQLE-201ENST00000265896 REREQ9P2R6 1566 aa20.14■□□□□ 0.82
SQLE-201ENST00000265896 ST3GAL1Q11201 340 aa20.14■□□□□ 0.82
SQLE-201ENST00000265896 CCDC183Q5T5S1 534 aa20.14■□□□□ 0.81
SQLE-201ENST00000265896 LRRC2Q9BYS8 371 aa20.14■□□□□ 0.81
SQLE-201ENST00000265896 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 TPCN1Q9ULQ1 816 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 POLA2Q14181 598 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 SLFNL1Q499Z3 407 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 CDC37L1Q7L3B6 337 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 A0A087WWV3 80 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 RAB11FIP3O75154 756 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 ESCO1Q5FWF5 840 aa20.13■□□□□ 0.81
SQLE-201ENST00000265896 HS1BP3Q53T59 392 aa20.12■□□□□ 0.81
SQLE-201ENST00000265896 FBXW7Q969H0 707 aa20.12■□□□□ 0.81
SQLE-201ENST00000265896 MTMR6Q9Y217 621 aa20.12■□□□□ 0.81
SQLE-201ENST00000265896 RBM8AQ9Y5S9 174 aaKnown RBP20.12■□□□□ 0.81
SQLE-201ENST00000265896 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
SQLE-201ENST00000265896 NMIQ13287 307 aaPredicted RBP20.12■□□□□ 0.81
SQLE-201ENST00000265896 TECPR2O15040 1411 aa20.12■□□□□ 0.81
SQLE-201ENST00000265896 EAF2Q96CJ1 260 aaPredicted RBP20.11■□□□□ 0.81
SQLE-201ENST00000265896 LARP1BQ659C4 914 aaKnown RBP20.11■□□□□ 0.81
SQLE-201ENST00000265896 CYP46A1Q9Y6A2 500 aa20.11■□□□□ 0.81
SQLE-201ENST00000265896 A0A0D9SFI3 127 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 PHF14O94880 888 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 LIG1P18858 919 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.1■□□□□ 0.81
SQLE-201ENST00000265896 NOLC1Q14978 699 aaKnown RBP eCLIP20.1■□□□□ 0.81
SQLE-201ENST00000265896 SUCLG2Q96I99 432 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 ECHDC1Q9NTX5 307 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 NRKQ7Z2Y5 1582 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 AKAP12Q02952 1782 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 GLRX3O76003 335 aaKnown RBP20.1■□□□□ 0.81
SQLE-201ENST00000265896 UBE2HP62256 183 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 LUZP1Q86V48 1076 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 FSD1Q9BTV5 496 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 BICC1Q9H694 974 aaKnown RBP20.1■□□□□ 0.81
SQLE-201ENST00000265896 PYCARDQ9ULZ3 195 aa20.1■□□□□ 0.81
SQLE-201ENST00000265896 SSH2Q76I76 1423 aa20.09■□□□□ 0.81
SQLE-201ENST00000265896 ADCY9O60503 1353 aa20.09■□□□□ 0.81
SQLE-201ENST00000265896 CCDC129Q6ZRS4 1044 aa20.09■□□□□ 0.81
SQLE-201ENST00000265896 PSME1Q06323 249 aa20.09■□□□□ 0.81
SQLE-201ENST00000265896 ZNF589Q86UQ0 364 aaPredicted RBP20.08■□□□□ 0.81
SQLE-201ENST00000265896 NAP1L2Q9ULW6 460 aaPredicted RBP20.08■□□□□ 0.81
SQLE-201ENST00000265896 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.8
SQLE-201ENST00000265896 TTC6Q86TZ1 520 aa20.08■□□□□ 0.8
SQLE-201ENST00000265896 RGPD8O14715 1765 aaPredicted RBP20.07■□□□□ 0.8
SQLE-201ENST00000265896 CREB3L3Q68CJ9 461 aa20.07■□□□□ 0.8
SQLE-201ENST00000265896 SASH1O94885 1247 aa20.07■□□□□ 0.8
SQLE-201ENST00000265896 SEC62Q99442 399 aaKnown RBP20.07■□□□□ 0.8
SQLE-201ENST00000265896 JAK2O60674 1132 aa20.07■□□□□ 0.8
SQLE-201ENST00000265896 CSPP1Q1MSJ5 1256 aa20.06■□□□□ 0.8
SQLE-201ENST00000265896 KDM4AO75164 1064 aa20.06■□□□□ 0.8
SQLE-201ENST00000265896 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
SQLE-201ENST00000265896 LARP1Q6PKG0 1096 aaKnown RBP20.05■□□□□ 0.8
SQLE-201ENST00000265896 ERCC4Q92889 916 aaPredicted RBP20.05■□□□□ 0.8
SQLE-201ENST00000265896 HTATSF1O43719 755 aaKnown RBP20.05■□□□□ 0.8
SQLE-201ENST00000265896 LRMPQ12912 555 aa20.05■□□□□ 0.8
SQLE-201ENST00000265896 KAZALD1Q96I82 304 aa20.05■□□□□ 0.8
SQLE-201ENST00000265896 DNAJC2Q99543 621 aaKnown RBP20.05■□□□□ 0.8
SQLE-201ENST00000265896 NRBP1Q9UHY1 535 aa20.05■□□□□ 0.8
SQLE-201ENST00000265896 PHF8Q9UPP1 1060 aa20.05■□□□□ 0.8
SQLE-201ENST00000265896 G3BP1Q13283 466 aaKnown RBP eCLIP20.04■□□□□ 0.8
SQLE-201ENST00000265896 DRC7Q8IY82 874 aa20.04■□□□□ 0.8
SQLE-201ENST00000265896 ZC3H6P61129 1189 aaKnown RBP20.04■□□□□ 0.8
SQLE-201ENST00000265896 EPHA10Q5JZY3 1008 aa20.04■□□□□ 0.8
SQLE-201ENST00000265896 KCNF1Q9H3M0 494 aa20.04■□□□□ 0.8
SQLE-201ENST00000265896 DACT1Q9NYF0 836 aa20.04■□□□□ 0.8
SQLE-201ENST00000265896 CCDC171Q6TFL3 1326 aa20.04■□□□□ 0.8
SQLE-201ENST00000265896 PTGS1P23219 599 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms