RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 CERS3Q8IU89 383 aa20.05■□□□□ 0.8
SRF-201ENST00000265354 DDX19AQ9NUU7 478 aaKnown RBP20.05■□□□□ 0.8
SRF-201ENST00000265354 ACEP12821 1306 aa20.05■□□□□ 0.8
SRF-201ENST00000265354 A0A087WWV3 80 aa20.05■□□□□ 0.8
SRF-201ENST00000265354 EIF2AK4Q9P2K8 1649 aaKnown RBP20.05■□□□□ 0.8
SRF-201ENST00000265354 DDX46Q7L014 1031 aaKnown RBP20.04■□□□□ 0.8
SRF-201ENST00000265354 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
SRF-201ENST00000265354 ZDHHC9Q9Y397 364 aa20.04■□□□□ 0.8
SRF-201ENST00000265354 CWF19L2Q2TBE0 894 aaKnown RBP20.04■□□□□ 0.8
SRF-201ENST00000265354 IPO4Q8TEX9 1081 aaKnown RBP20.04■□□□□ 0.8
SRF-201ENST00000265354 CCDC34Q96HJ3 373 aa20.04■□□□□ 0.8
SRF-201ENST00000265354 TMCO3Q6UWJ1 677 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 ABCC4O15439 1325 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 NRBP1Q9UHY1 535 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 ESCO1Q5FWF5 840 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 LARP1Q6PKG0 1096 aaKnown RBP20.03■□□□□ 0.8
SRF-201ENST00000265354 RASEFQ8IZ41 740 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 KLHDC4Q8TBB5 520 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 NBPF7P0C2Y1 421 aaPredicted RBP20.03■□□□□ 0.8
SRF-201ENST00000265354 HSP90B2PQ58FF3 399 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 CPLX3Q8WVH0 158 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 PCMTD1Q96MG8 357 aaPredicted RBP20.03■□□□□ 0.8
SRF-201ENST00000265354 SNRKQ9NRH2 765 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 ANO10Q9NW15 660 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 MTMR7Q9Y216 660 aa20.03■□□□□ 0.8
SRF-201ENST00000265354 LIG1P18858 919 aa20.02■□□□□ 0.8
SRF-201ENST00000265354 SETQ01105 290 aaPredicted RBP20.02■□□□□ 0.8
SRF-201ENST00000265354 AOPEPQ8N6M6 819 aa20.02■□□□□ 0.8
SRF-201ENST00000265354 GTF3C6Q969F1 213 aa20.02■□□□□ 0.8
SRF-201ENST00000265354 AKAP17AQ02040 695 aaKnown RBP20.02■□□□□ 0.8
SRF-201ENST00000265354 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.79
SRF-201ENST00000265354 SNW1Q13573 536 aaKnown RBP20.02■□□□□ 0.79
SRF-201ENST00000265354 FAM227BQ96M60 508 aa20.01■□□□□ 0.79
SRF-201ENST00000265354 KDM5DQ9BY66 1539 aa20.01■□□□□ 0.79
SRF-201ENST00000265354 KIF21AQ7Z4S6 1674 aa20.01■□□□□ 0.79
SRF-201ENST00000265354 ATP5J2-PTCD1G3V325 749 aa20.01■□□□□ 0.79
SRF-201ENST00000265354 PTCD1O75127 700 aaKnown RBP20.01■□□□□ 0.79
SRF-201ENST00000265354 LMOD1P29536 600 aaPredicted RBP20.01■□□□□ 0.79
SRF-201ENST00000265354 NMIQ13287 307 aaPredicted RBP20.01■□□□□ 0.79
SRF-201ENST00000265354 DNAI1Q9UI46 699 aa20.01■□□□□ 0.79
SRF-201ENST00000265354 TPM1P09493 284 aa20.01■□□□□ 0.79
SRF-201ENST00000265354 UGGT1Q9NYU2 1555 aa20.01■□□□□ 0.79
SRF-201ENST00000265354 CDC37L1Q7L3B6 337 aa20■□□□□ 0.79
SRF-201ENST00000265354 CHL1O00533 1208 aa20■□□□□ 0.79
SRF-201ENST00000265354 TERF1P54274 439 aa20■□□□□ 0.79
SRF-201ENST00000265354 NOM1Q5C9Z4 860 aaKnown RBP20■□□□□ 0.79
SRF-201ENST00000265354 EVI5LQ96CN4 794 aa20■□□□□ 0.79
SRF-201ENST00000265354 PLEKHO1Q53GL0 409 aaPredicted RBP20■□□□□ 0.79
SRF-201ENST00000265354 KLHL10Q6JEL2 608 aa20■□□□□ 0.79
SRF-201ENST00000265354 CBX8Q9HC52 389 aa20■□□□□ 0.79
SRF-201ENST00000265354 ABCC2Q92887 1545 aa20■□□□□ 0.79
SRF-201ENST00000265354 CCDC69A6NI79 296 aa20■□□□□ 0.79
SRF-201ENST00000265354 NEK1Q96PY6 1258 aa20■□□□□ 0.79
SRF-201ENST00000265354 TSR1Q2NL82 804 aaKnown RBP19.99■□□□□ 0.79
SRF-201ENST00000265354 CCDC144CPQ8IYA2 1237 aa19.99■□□□□ 0.79
SRF-201ENST00000265354 KRT222Q8N1A0 295 aa19.99■□□□□ 0.79
SRF-201ENST00000265354 MYD88Q99836 296 aa19.99■□□□□ 0.79
SRF-201ENST00000265354 TRIM34Q9BYJ4 488 aa19.99■□□□□ 0.79
SRF-201ENST00000265354 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
SRF-201ENST00000265354 CREB3L3Q68CJ9 461 aa19.99■□□□□ 0.79
SRF-201ENST00000265354 EDC3Q96F86 508 aaKnown RBP19.99■□□□□ 0.79
SRF-201ENST00000265354 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
SRF-201ENST00000265354 NAA30Q147X3 362 aaPredicted RBP19.98■□□□□ 0.79
SRF-201ENST00000265354 SGSM2O43147 1006 aa19.98■□□□□ 0.79
SRF-201ENST00000265354 GOLIM4O00461 696 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 ZC3H6P61129 1189 aaKnown RBP19.97■□□□□ 0.79
SRF-201ENST00000265354 SYT10Q6XYQ8 523 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 NOC3LQ8WTT2 800 aaKnown RBP19.97■□□□□ 0.79
SRF-201ENST00000265354 EYA1Q99502 592 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 PAXBP1Q9Y5B6 917 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
SRF-201ENST00000265354 SAFBQ15424 915 aaKnown RBP eCLIP19.97■□□□□ 0.79
SRF-201ENST00000265354 Q6ZUG5 572 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 JAK2O60674 1132 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 PTH1RQ03431 593 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 KRT32Q14532 448 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 ADCK5Q3MIX3 580 aa19.97■□□□□ 0.79
SRF-201ENST00000265354 DHX37Q8IY37 1157 aaKnown RBP19.97■□□□□ 0.79
SRF-201ENST00000265354 NOL10Q9BSC4 688 aaKnown RBP19.97■□□□□ 0.79
SRF-201ENST00000265354 RUFY3Q7L099 469 aa19.96■□□□□ 0.79
SRF-201ENST00000265354 TIGD1Q96MW7 591 aa19.96■□□□□ 0.79
SRF-201ENST00000265354 IBSPP21815 317 aaPredicted RBP19.96■□□□□ 0.79
SRF-201ENST00000265354 MARCKSP29966 332 aaPredicted RBP19.96■□□□□ 0.79
SRF-201ENST00000265354 FAM193AP78312 1265 aa19.96■□□□□ 0.79
SRF-201ENST00000265354 ELF2Q15723 593 aa19.96■□□□□ 0.79
SRF-201ENST00000265354 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
SRF-201ENST00000265354 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
SRF-201ENST00000265354 SLC3A2P08195 630 aaKnown RBP19.95■□□□□ 0.78
SRF-201ENST00000265354 STX1AQ16623 288 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 ME3Q16798 604 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 CCDC102AQ96A19 550 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 C8orf76Q96K31 380 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
SRF-201ENST00000265354 TTC21BQ7Z4L5 1316 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 NPHP3Q7Z494 1330 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 HSPA4P34932 840 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 OTUD7BQ6GQQ9 843 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 TTC6Q86TZ1 520 aa19.95■□□□□ 0.78
SRF-201ENST00000265354 GTPBP4Q9BZE4 634 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms