RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 ALDH1L1O75891 902 aa23.8■■□□□ 1.4
NEIL3-201ENST00000264596 RPAP1Q9BWH6 1393 aaPredicted RBP23.8■■□□□ 1.4
NEIL3-201ENST00000264596 PHRF1Q9P1Y6 1649 aaKnown RBP23.8■■□□□ 1.4
NEIL3-201ENST00000264596 IFIT2P09913 472 aaKnown RBP23.8■■□□□ 1.4
NEIL3-201ENST00000264596 RNF214Q8ND24 703 aa23.8■■□□□ 1.4
NEIL3-201ENST00000264596 ECHDC1Q9NTX5 307 aa23.8■■□□□ 1.4
NEIL3-201ENST00000264596 MSNP26038 577 aaKnown RBP23.79■■□□□ 1.4
NEIL3-201ENST00000264596 AIMP1Q12904 312 aaKnown RBP23.79■■□□□ 1.4
NEIL3-201ENST00000264596 NCAPD2Q15021 1401 aa23.79■■□□□ 1.4
NEIL3-201ENST00000264596 CASTP20810 708 aaKnown RBP23.79■■□□□ 1.4
NEIL3-201ENST00000264596 RUFY3Q7L099 469 aa23.79■■□□□ 1.4
NEIL3-201ENST00000264596 USP48Q86UV5 1035 aa23.79■■□□□ 1.4
NEIL3-201ENST00000264596 PTH1RQ03431 593 aa23.78■■□□□ 1.4
NEIL3-201ENST00000264596 AACSQ86V21 672 aa23.78■■□□□ 1.4
NEIL3-201ENST00000264596 CRYBG1Q9Y4K1 1723 aa23.78■■□□□ 1.4
NEIL3-201ENST00000264596 PDLIM2Q96JY6 352 aa23.78■■□□□ 1.4
NEIL3-201ENST00000264596 LIMCH1Q9UPQ0 1083 aa23.78■■□□□ 1.4
NEIL3-201ENST00000264596 AXIN2Q9Y2T1 843 aa23.78■■□□□ 1.4
NEIL3-201ENST00000264596 TPRNQ4KMQ1 711 aa23.77■■□□□ 1.4
NEIL3-201ENST00000264596 RUFY2Q8WXA3 655 aa23.77■■□□□ 1.4
NEIL3-201ENST00000264596 GPATCH3Q96I76 525 aa23.77■■□□□ 1.4
NEIL3-201ENST00000264596 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
NEIL3-201ENST00000264596 ERC1Q8IUD2 1116 aa23.76■■□□□ 1.39
NEIL3-201ENST00000264596 SUCLG2Q96I99 432 aa23.76■■□□□ 1.39
NEIL3-201ENST00000264596 SYAP1Q96A49 352 aaPredicted RBP23.75■■□□□ 1.39
NEIL3-201ENST00000264596 HYPKQ9NX55 129 aa23.75■■□□□ 1.39
NEIL3-201ENST00000264596 DTNBO60941 627 aa23.75■■□□□ 1.39
NEIL3-201ENST00000264596 HEG1Q9ULI3 1381 aa23.75■■□□□ 1.39
NEIL3-201ENST00000264596 GRM8O00222 908 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 LARGE1O95461 756 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 JAKMIP1Q96N16 626 aaKnown RBP23.74■■□□□ 1.39
NEIL3-201ENST00000264596 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.74■■□□□ 1.39
NEIL3-201ENST00000264596 ADCK5Q3MIX3 580 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 LINS1Q8NG48 757 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 TSPY26PQ9H489 355 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 BICC1Q9H694 974 aaKnown RBP23.74■■□□□ 1.39
NEIL3-201ENST00000264596 SMC3Q9UQE7 1217 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 CNPY2Q9Y2B0 182 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 TCHHQ07283 1943 aa23.74■■□□□ 1.39
NEIL3-201ENST00000264596 GLIPR1L2Q4G1C9 344 aa23.73■■□□□ 1.39
NEIL3-201ENST00000264596 DDX54Q8TDD1 881 aaKnown RBP23.73■■□□□ 1.39
NEIL3-201ENST00000264596 KAZALD1Q96I82 304 aa23.73■■□□□ 1.39
NEIL3-201ENST00000264596 HDAC5Q9UQL6 1122 aa23.73■■□□□ 1.39
NEIL3-201ENST00000264596 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.73■■□□□ 1.39
NEIL3-201ENST00000264596 OVOS2A0A0G2JMS6 1433 aa23.73■■□□□ 1.39
NEIL3-201ENST00000264596 SLIT3O75094 1523 aa23.73■■□□□ 1.39
NEIL3-201ENST00000264596 ZSCAN22P10073 491 aaPredicted RBP23.73■■□□□ 1.39
NEIL3-201ENST00000264596 SYT1P21579 422 aa23.73■■□□□ 1.39
NEIL3-201ENST00000264596 STX6O43752 255 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 DDX58O95786 925 aaKnown RBP23.72■■□□□ 1.39
NEIL3-201ENST00000264596 EVI5LQ96CN4 794 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 CCDC8Q9H0W5 538 aaPredicted RBP23.72■■□□□ 1.39
NEIL3-201ENST00000264596 SASH1O94885 1247 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
NEIL3-201ENST00000264596 G3BP1Q13283 466 aaKnown RBP eCLIP23.72■■□□□ 1.39
NEIL3-201ENST00000264596 SLC39A6Q13433 755 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 HS1BP3Q53T59 392 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 CCDC83Q8IWF9 413 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 SIL1Q9H173 461 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 DDX21Q9NR30 783 aaKnown RBP eCLIP23.72■■□□□ 1.39
NEIL3-201ENST00000264596 PDRG1Q9NUG6 133 aa23.72■■□□□ 1.39
NEIL3-201ENST00000264596 EAF2Q96CJ1 260 aaPredicted RBP23.71■■□□□ 1.39
NEIL3-201ENST00000264596 MYL6BP14649 208 aa23.7■■□□□ 1.38
NEIL3-201ENST00000264596 ZC3H6P61129 1189 aaKnown RBP23.7■■□□□ 1.38
NEIL3-201ENST00000264596 KRT28Q7Z3Y7 464 aa23.7■■□□□ 1.38
NEIL3-201ENST00000264596 RIC3Q7Z5B4 369 aa23.7■■□□□ 1.38
NEIL3-201ENST00000264596 FAM227BQ96M60 508 aa23.7■■□□□ 1.38
NEIL3-201ENST00000264596 TLR7Q9NYK1 1049 aaKnown RBP23.7■■□□□ 1.38
NEIL3-201ENST00000264596 NOL7Q9UMY1 257 aaKnown RBP23.7■■□□□ 1.38
NEIL3-201ENST00000264596 PDIA6Q15084 440 aa23.69■■□□□ 1.38
NEIL3-201ENST00000264596 CYP46A1Q9Y6A2 500 aa23.69■■□□□ 1.38
NEIL3-201ENST00000264596 CCDC171Q6TFL3 1326 aa23.69■■□□□ 1.38
NEIL3-201ENST00000264596 SIPA1L3O60292 1781 aaPredicted RBP23.69■■□□□ 1.38
NEIL3-201ENST00000264596 PHF14O94880 888 aa23.69■■□□□ 1.38
NEIL3-201ENST00000264596 KCNJ4P48050 445 aa23.69■■□□□ 1.38
NEIL3-201ENST00000264596 KLHDC4Q8TBB5 520 aa23.69■■□□□ 1.38
NEIL3-201ENST00000264596 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.69■■□□□ 1.38
NEIL3-201ENST00000264596 F13A1P00488 732 aa23.68■■□□□ 1.38
NEIL3-201ENST00000264596 NMIQ13287 307 aaPredicted RBP23.68■■□□□ 1.38
NEIL3-201ENST00000264596 VPS53Q5VIR6 699 aa23.68■■□□□ 1.38
NEIL3-201ENST00000264596 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
NEIL3-201ENST00000264596 IGKV5-2P06315 115 aa23.68■■□□□ 1.38
NEIL3-201ENST00000264596 GJB2P29033 226 aa23.68■■□□□ 1.38
NEIL3-201ENST00000264596 PKNOX2Q96KN3 472 aa23.68■■□□□ 1.38
NEIL3-201ENST00000264596 RBM8AQ9Y5S9 174 aaKnown RBP23.68■■□□□ 1.38
NEIL3-201ENST00000264596 RRP9O43818 475 aaKnown RBP23.67■■□□□ 1.38
NEIL3-201ENST00000264596 TMEM87AQ8NBN3 555 aa23.67■■□□□ 1.38
NEIL3-201ENST00000264596 ZSWIM6Q9HCJ5 1215 aa23.67■■□□□ 1.38
NEIL3-201ENST00000264596 UTYO14607 1347 aa23.67■■□□□ 1.38
NEIL3-201ENST00000264596 FIBPO43427 364 aa23.67■■□□□ 1.38
NEIL3-201ENST00000264596 NECTIN1Q15223 517 aa23.67■■□□□ 1.38
NEIL3-201ENST00000264596 BOLA2Q9H3K6 86 aa23.67■■□□□ 1.38
NEIL3-201ENST00000264596 ZNF142P52746 1687 aaPredicted RBP23.66■■□□□ 1.38
NEIL3-201ENST00000264596 ZKSCAN1P17029 563 aaPredicted RBP23.66■■□□□ 1.38
NEIL3-201ENST00000264596 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
NEIL3-201ENST00000264596 NPHP4O75161 1426 aaPredicted RBP23.66■■□□□ 1.38
NEIL3-201ENST00000264596 CREB3L3Q68CJ9 461 aa23.65■■□□□ 1.38
NEIL3-201ENST00000264596 CAMTA1Q9Y6Y1 1673 aa23.65■■□□□ 1.38
NEIL3-201ENST00000264596 ERBB3P21860 1342 aa23.65■■□□□ 1.38
NEIL3-201ENST00000264596 OFD1O75665 1012 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms