RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CARD6Q9BX69 1037 aa19.07■□□□□ 0.64
GPC1-201ENST00000264039 EPC1Q9H2F5 836 aa19.07■□□□□ 0.64
GPC1-201ENST00000264039 RAD50Q92878 1312 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 FSIP1Q8NA03 581 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 DRC1Q96MC2 740 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 DEF6Q9H4E7 631 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 SYCP2Q9BX26 1530 aa19.06■□□□□ 0.64
GPC1-201ENST00000264039 GNG11P61952 73 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 FAM193AP78312 1265 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 LRRC8AQ8IWT6 810 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 BOLA2Q9H3K6 86 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 C14orf93Q9H972 538 aaKnown RBP19.05■□□□□ 0.64
GPC1-201ENST00000264039 EIF4G3O43432 1585 aaKnown RBP19.05■□□□□ 0.64
GPC1-201ENST00000264039 CCT2P78371 535 aaKnown RBP19.05■□□□□ 0.64
GPC1-201ENST00000264039 STK38Q15208 465 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 A0A1W2PP64 1363 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 CD109Q6YHK3 1445 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 CAPN2P17655 700 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 ZSCAN26Q16670 478 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 TXLNBQ8N3L3 684 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 IFNKQ9P0W0 207 aa19.05■□□□□ 0.64
GPC1-201ENST00000264039 ANXA1P04083 346 aa19.04■□□□□ 0.64
GPC1-201ENST00000264039 AACSQ86V21 672 aa19.04■□□□□ 0.64
GPC1-201ENST00000264039 CCDC8Q9H0W5 538 aaPredicted RBP19.04■□□□□ 0.64
GPC1-201ENST00000264039 EIF2AK4Q9P2K8 1649 aaKnown RBP19.04■□□□□ 0.64
GPC1-201ENST00000264039 DISP1Q96F81 1524 aa19.04■□□□□ 0.64
GPC1-201ENST00000264039 BRPF1P55201 1214 aaPredicted RBP19.04■□□□□ 0.64
GPC1-201ENST00000264039 TEFQ10587 303 aa19.04■□□□□ 0.64
GPC1-201ENST00000264039 SH2B1Q9NRF2 756 aaPredicted RBP19.04■□□□□ 0.64
GPC1-201ENST00000264039 ANO10Q9NW15 660 aa19.04■□□□□ 0.64
GPC1-201ENST00000264039 OAS2P29728 719 aaKnown RBP19.04■□□□□ 0.64
GPC1-201ENST00000264039 ADCK5Q3MIX3 580 aa19.04■□□□□ 0.64
GPC1-201ENST00000264039 MORC2Q9Y6X9 1032 aaPredicted RBP19.03■□□□□ 0.64
GPC1-201ENST00000264039 PES1O00541 588 aaKnown RBP19.03■□□□□ 0.64
GPC1-201ENST00000264039 FOXO3O43524 673 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 RAD51AP2Q09MP3 1159 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 FLIIQ13045 1269 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 STX1AQ16623 288 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 VPS18Q9P253 973 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 CFAP45Q9UL16 551 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 NPHP3Q7Z494 1330 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 TRIM66O15016 1216 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 CTIFO43310 598 aaKnown RBP19.03■□□□□ 0.64
GPC1-201ENST00000264039 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
GPC1-201ENST00000264039 ME3Q16798 604 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 BRF1Q92994 677 aa19.03■□□□□ 0.64
GPC1-201ENST00000264039 SRRTQ9BXP5 876 aaKnown RBP19.03■□□□□ 0.64
GPC1-201ENST00000264039 KIF2AO00139 706 aaPredicted RBP19.02■□□□□ 0.64
GPC1-201ENST00000264039 EVCP57679 992 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 HDGFL1Q5TGJ6 251 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 ZNF518AQ6AHZ1 1483 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 NEMFO60524 1076 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 HSPA4P34932 840 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 CLCN6P51797 869 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 ARFGAP3Q9NP61 516 aa19.02■□□□□ 0.64
GPC1-201ENST00000264039 NPM1P06748 294 aaKnown RBP eCLIP19.02■□□□□ 0.63
GPC1-201ENST00000264039 CCDC30Q5VVM6 783 aa19.02■□□□□ 0.63
GPC1-201ENST00000264039 RHPN1Q8TCX5 695 aa19.02■□□□□ 0.63
GPC1-201ENST00000264039 RABEP2Q9H5N1 569 aa19.02■□□□□ 0.63
GPC1-201ENST00000264039 ITSN2Q9NZM3 1697 aa19.01■□□□□ 0.63
GPC1-201ENST00000264039 RBM8AQ9Y5S9 174 aaKnown RBP19.01■□□□□ 0.63
GPC1-201ENST00000264039 RAB11FIP4Q86YS3 637 aa19.01■□□□□ 0.63
GPC1-201ENST00000264039 RTL1A6NKG5 1358 aa19.01■□□□□ 0.63
GPC1-201ENST00000264039 LEO1Q8WVC0 666 aaPredicted RBP19.01■□□□□ 0.63
GPC1-201ENST00000264039 UTP14AQ9BVJ6 771 aaKnown RBP19.01■□□□□ 0.63
GPC1-201ENST00000264039 POLR3DP05423 398 aaPredicted RBP19■□□□□ 0.63
GPC1-201ENST00000264039 ATP2B1P20020 1258 aa19■□□□□ 0.63
GPC1-201ENST00000264039 G3BP1Q13283 466 aaKnown RBP eCLIP19■□□□□ 0.63
GPC1-201ENST00000264039 SYNE3Q6ZMZ3 975 aa19■□□□□ 0.63
GPC1-201ENST00000264039 JAK2O60674 1132 aa19■□□□□ 0.63
GPC1-201ENST00000264039 IL25Q9H293 177 aa19■□□□□ 0.63
GPC1-201ENST00000264039 CPLX3Q8WVH0 158 aa19■□□□□ 0.63
GPC1-201ENST00000264039 E9PCH4 1651 aa19■□□□□ 0.63
GPC1-201ENST00000264039 H0YHG0 523 aa18.99■□□□□ 0.63
GPC1-201ENST00000264039 KIF1BPQ96EK5 621 aa18.99■□□□□ 0.63
GPC1-201ENST00000264039 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
GPC1-201ENST00000264039 AXDND1Q5T1B0 1012 aaPredicted RBP18.99■□□□□ 0.63
GPC1-201ENST00000264039 C11orf57Q6ZUT1 292 aaPredicted RBP18.99■□□□□ 0.63
GPC1-201ENST00000264039 PUF60Q9UHX1 559 aaKnown RBP18.99■□□□□ 0.63
GPC1-201ENST00000264039 SGSM2O43147 1006 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 PTH1RQ03431 593 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 FTOQ9C0B1 505 aaKnown RBP eCLIP18.98■□□□□ 0.63
GPC1-201ENST00000264039 CPLX1O14810 134 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 GOLGA8FQ08AF8 430 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 GOLGA8DPQ0D2H9 430 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 KARSQ15046 597 aaKnown RBP18.98■□□□□ 0.63
GPC1-201ENST00000264039 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
GPC1-201ENST00000264039 CASQ1P31415 396 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 GSDMDP57764 484 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 E2F4Q16254 413 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 CLSTN2Q9H4D0 955 aa18.98■□□□□ 0.63
GPC1-201ENST00000264039 A0A1B0GVL5 298 aa18.97■□□□□ 0.63
GPC1-201ENST00000264039 GLRX3O76003 335 aaKnown RBP18.97■□□□□ 0.63
GPC1-201ENST00000264039 TAF7Q15545 349 aaPredicted RBP18.97■□□□□ 0.63
GPC1-201ENST00000264039 NCKAP5LQ9HCH0 1330 aa18.97■□□□□ 0.63
GPC1-201ENST00000264039 SMC1AQ14683 1233 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms