RNA–Protein interactions for RNA: ENST00000263834.9

GREB1-202, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 2,448 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-202ENST00000263834 GZF1Q9H116 711 aaPredicted RBP12.79□□□□□ -0.36
GREB1-202ENST00000263834 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
GREB1-202ENST00000263834 CCDC87Q9NVE4 849 aa12.79□□□□□ -0.36
GREB1-202ENST00000263834 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
GREB1-202ENST00000263834 PNPLA7Q6ZV29 1317 aa12.78□□□□□ -0.36
GREB1-202ENST00000263834 SMIM5Q71RC9 77 aa12.78□□□□□ -0.36
GREB1-202ENST00000263834 FLAD1Q8NFF5 587 aa12.78□□□□□ -0.36
GREB1-202ENST00000263834 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
GREB1-202ENST00000263834 PDGFDQ9GZP0 370 aaPredicted RBP12.78□□□□□ -0.36
GREB1-202ENST00000263834 KDM3BQ7LBC6 1761 aa12.78□□□□□ -0.36
GREB1-202ENST00000263834 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
GREB1-202ENST00000263834 SSFA2P28290 1259 aa12.78□□□□□ -0.36
GREB1-202ENST00000263834 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
GREB1-202ENST00000263834 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
GREB1-202ENST00000263834 IL16Q14005 1332 aa12.77□□□□□ -0.36
GREB1-202ENST00000263834 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 EXOSC9Q06265 439 aaKnown RBP12.77□□□□□ -0.37
GREB1-202ENST00000263834 MVPQ14764 893 aaKnown RBP12.77□□□□□ -0.37
GREB1-202ENST00000263834 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 AMIGO3Q86WK7 504 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.37
GREB1-202ENST00000263834 ANTXR1Q9H6X2 564 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 ZBTB1Q9Y2K1 713 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 TJP1Q07157 1748 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 KRT24Q2M2I5 525 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.37
GREB1-202ENST00000263834 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
GREB1-202ENST00000263834 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
GREB1-202ENST00000263834 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
GREB1-202ENST00000263834 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
GREB1-202ENST00000263834 A1BGP04217 495 aa12.76□□□□□ -0.37
GREB1-202ENST00000263834 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
GREB1-202ENST00000263834 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
GREB1-202ENST00000263834 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
GREB1-202ENST00000263834 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
GREB1-202ENST00000263834 ELL2O00472 640 aaPredicted RBP12.75□□□□□ -0.37
GREB1-202ENST00000263834 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
GREB1-202ENST00000263834 RFC4P35249 363 aa12.75□□□□□ -0.37
GREB1-202ENST00000263834 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
GREB1-202ENST00000263834 TRIM27P14373 513 aa12.74□□□□□ -0.37
GREB1-202ENST00000263834 ADRA2BP18089 450 aa12.74□□□□□ -0.37
GREB1-202ENST00000263834 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
GREB1-202ENST00000263834 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
GREB1-202ENST00000263834 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
GREB1-202ENST00000263834 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
GREB1-202ENST00000263834 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
GREB1-202ENST00000263834 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
GREB1-202ENST00000263834 SLC16A10Q8TF71 515 aa12.73□□□□□ -0.37
GREB1-202ENST00000263834 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
GREB1-202ENST00000263834 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
GREB1-202ENST00000263834 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
GREB1-202ENST00000263834 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
GREB1-202ENST00000263834 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 HOXB7P09629 217 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 C8orf58Q8NAV2 365 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 C22orf23Q9BZE7 217 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 COL15A1P39059 1388 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 ZPR1O75312 459 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 MYL6BP14649 208 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
GREB1-202ENST00000263834 HDGFL1Q5TGJ6 251 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 SPON1Q9HCB6 807 aa12.72□□□□□ -0.37
GREB1-202ENST00000263834 NBPF26B4DH59 902 aa12.71□□□□□ -0.37
GREB1-202ENST00000263834 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
GREB1-202ENST00000263834 NBPF10Q6P3W6 841 aaKnown RBP12.71□□□□□ -0.37
GREB1-202ENST00000263834 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
GREB1-202ENST00000263834 NBPF15Q8N660 670 aa12.71□□□□□ -0.37
GREB1-202ENST00000263834 A0A087WZG4 1122 aa12.71□□□□□ -0.38
GREB1-202ENST00000263834 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.38
GREB1-202ENST00000263834 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.38
GREB1-202ENST00000263834 CASZ1Q86V15 1759 aa12.7□□□□□ -0.38
GREB1-202ENST00000263834 TWISTNBQ3B726 338 aaPredicted RBP12.7□□□□□ -0.38
GREB1-202ENST00000263834 TSPYL6Q8N831 410 aa12.7□□□□□ -0.38
GREB1-202ENST00000263834 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
GREB1-202ENST00000263834 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
GREB1-202ENST00000263834 PANK2Q9BZ23 570 aa12.7□□□□□ -0.38
GREB1-202ENST00000263834 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
GREB1-202ENST00000263834 ERBB4Q15303 1308 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 USPL1Q5W0Q7 1092 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 LNPKQ9C0E8 428 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 RRAGDQ9NQL2 400 aaPredicted RBP12.69□□□□□ -0.38
GREB1-202ENST00000263834 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 USP42Q9H9J4 1324 aaKnown RBP12.69□□□□□ -0.38
GREB1-202ENST00000263834 ANXA1P04083 346 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 POLD1P28340 1107 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 ATF7IPQ6VMQ6 1270 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
GREB1-202ENST00000263834 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
GREB1-202ENST00000263834 GYS1P13807 737 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 NLGN1Q8N2Q7 840 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 DBF4Q9UBU7 674 aaPredicted RBP12.68□□□□□ -0.38
GREB1-202ENST00000263834 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 PDIA6Q15084 440 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 PROSER3Q2NL68 480 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
GREB1-202ENST00000263834 MCM4P33991 863 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms