RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 GRM1Q13255 1194 aa17.75■□□□□ 0.43
SGCA-201ENST00000262018 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
SGCA-201ENST00000262018 TBC1D9BQ66K14 1250 aa17.75■□□□□ 0.43
SGCA-201ENST00000262018 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
SGCA-201ENST00000262018 CNKSR1Q969H4 720 aa17.75■□□□□ 0.43
SGCA-201ENST00000262018 ZNF541Q9H0D2 1346 aa17.74■□□□□ 0.43
SGCA-201ENST00000262018 SOGA3Q5TF21 947 aa17.74■□□□□ 0.43
SGCA-201ENST00000262018 PRR5LQ6MZQ0 368 aa17.74■□□□□ 0.43
SGCA-201ENST00000262018 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
SGCA-201ENST00000262018 TSKSQ9UJT2 592 aa17.74■□□□□ 0.43
SGCA-201ENST00000262018 COL11A2P13942 1736 aaPredicted RBP17.74■□□□□ 0.43
SGCA-201ENST00000262018 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
SGCA-201ENST00000262018 CCDC184Q52MB2 194 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 PNMA8AQ86V59 439 aaPredicted RBP17.72■□□□□ 0.43
SGCA-201ENST00000262018 MCOLN1Q9GZU1 580 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 KNSTRNQ9Y448 316 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 SLX4Q8IY92 1834 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 NPHP1O15259 732 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 ECE1P42892 770 aa17.72■□□□□ 0.43
SGCA-201ENST00000262018 GPR101Q96P66 508 aaPredicted RBP17.72■□□□□ 0.43
SGCA-201ENST00000262018 NPC1L1Q9UHC9 1359 aa17.71■□□□□ 0.43
SGCA-201ENST00000262018 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.43
SGCA-201ENST00000262018 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.43
SGCA-201ENST00000262018 A0A087WZG4 1122 aa17.71■□□□□ 0.43
SGCA-201ENST00000262018 CYP4F22Q6NT55 531 aa17.71■□□□□ 0.43
SGCA-201ENST00000262018 LGR6Q9HBX8 967 aa17.71■□□□□ 0.43
SGCA-201ENST00000262018 MRS2Q9HD23 443 aa17.71■□□□□ 0.43
SGCA-201ENST00000262018 DDX21Q9NR30 783 aaKnown RBP eCLIP17.71■□□□□ 0.43
SGCA-201ENST00000262018 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
SGCA-201ENST00000262018 SRGNP10124 158 aa17.7■□□□□ 0.42
SGCA-201ENST00000262018 MASTLQ96GX5 879 aa17.7■□□□□ 0.42
SGCA-201ENST00000262018 ZNF277Q9NRM2 450 aaPredicted RBP17.7■□□□□ 0.42
SGCA-201ENST00000262018 SCN11AQ9UI33 1791 aa17.69■□□□□ 0.42
SGCA-201ENST00000262018 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
SGCA-201ENST00000262018 CCDC93Q567U6 631 aa17.69■□□□□ 0.42
SGCA-201ENST00000262018 SULT6B1Q6IMI4 303 aa17.69■□□□□ 0.42
SGCA-201ENST00000262018 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
SGCA-201ENST00000262018 CACNA1SQ13698 1873 aa17.69■□□□□ 0.42
SGCA-201ENST00000262018 PDE4DIPQ5VU43 2346 aa17.68■□□□□ 0.42
SGCA-201ENST00000262018 FMR1Q06787 632 aaKnown RBP eCLIP17.68■□□□□ 0.42
SGCA-201ENST00000262018 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
SGCA-201ENST00000262018 TBC1D2BQ9UPU7 963 aa17.68■□□□□ 0.42
SGCA-201ENST00000262018 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
SGCA-201ENST00000262018 ST5P78524 1137 aa17.67■□□□□ 0.42
SGCA-201ENST00000262018 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
SGCA-201ENST00000262018 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
SGCA-201ENST00000262018 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
SGCA-201ENST00000262018 THSD7BQ9C0I4 1608 aa17.67■□□□□ 0.42
SGCA-201ENST00000262018 RNMTO43148 476 aaKnown RBP17.66■□□□□ 0.42
SGCA-201ENST00000262018 AOC2O75106 756 aa17.66■□□□□ 0.42
SGCA-201ENST00000262018 STARD3NLO95772 234 aa17.66■□□□□ 0.42
SGCA-201ENST00000262018 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
SGCA-201ENST00000262018 C7orf43Q8WVR3 580 aa17.66■□□□□ 0.42
SGCA-201ENST00000262018 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
SGCA-201ENST00000262018 DGKZQ13574 1117 aa17.65■□□□□ 0.42
SGCA-201ENST00000262018 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
SGCA-201ENST00000262018 MAP2K2P36507 400 aa17.64■□□□□ 0.41
SGCA-201ENST00000262018 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
SGCA-201ENST00000262018 GPC2Q8N158 579 aa17.64■□□□□ 0.41
SGCA-201ENST00000262018 ARFGEF2Q9Y6D5 1785 aa17.63■□□□□ 0.41
SGCA-201ENST00000262018 FZD9O00144 591 aa17.63■□□□□ 0.41
SGCA-201ENST00000262018 IARSP41252 1262 aaKnown RBP17.63■□□□□ 0.41
SGCA-201ENST00000262018 GJA3Q9Y6H8 435 aa17.63■□□□□ 0.41
SGCA-201ENST00000262018 MRC1P22897 1456 aa17.63■□□□□ 0.41
SGCA-201ENST00000262018 SCN7AQ01118 1682 aa17.62■□□□□ 0.41
SGCA-201ENST00000262018 LTBP1Q14766 1721 aa17.62■□□□□ 0.41
SGCA-201ENST00000262018 TRAF5O00463 557 aa17.62■□□□□ 0.41
SGCA-201ENST00000262018 CA12O43570 354 aa17.62■□□□□ 0.41
SGCA-201ENST00000262018 CST9Q5W186 159 aa17.62■□□□□ 0.41
SGCA-201ENST00000262018 TLL2Q9Y6L7 1015 aa17.62■□□□□ 0.41
SGCA-201ENST00000262018 CASP8AP2Q9UKL3 1982 aa17.62■□□□□ 0.41
SGCA-201ENST00000262018 TNRC18O15417 2968 aaPredicted RBP17.62■□□□□ 0.41
SGCA-201ENST00000262018 NPR1P16066 1061 aa17.61■□□□□ 0.41
SGCA-201ENST00000262018 LMOD1P29536 600 aaPredicted RBP17.61■□□□□ 0.41
SGCA-201ENST00000262018 RTKN2Q8IZC4 609 aa17.61■□□□□ 0.41
SGCA-201ENST00000262018 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
SGCA-201ENST00000262018 SYNE4Q8N205 404 aa17.61■□□□□ 0.41
SGCA-201ENST00000262018 NPM2Q86SE8 214 aaKnown RBP17.6■□□□□ 0.41
SGCA-201ENST00000262018 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
SGCA-201ENST00000262018 CAMTA2O94983 1202 aa17.59■□□□□ 0.41
SGCA-201ENST00000262018 IL6STP40189 918 aaPredicted RBP17.59■□□□□ 0.41
SGCA-201ENST00000262018 JDP2Q8WYK2 163 aa17.59■□□□□ 0.41
SGCA-201ENST00000262018 EPS15P42566 896 aa17.58■□□□□ 0.41
SGCA-201ENST00000262018 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.41
SGCA-201ENST00000262018 SOX10P56693 466 aa17.58■□□□□ 0.41
SGCA-201ENST00000262018 NBPF5PQ86XG9 351 aaPredicted RBP17.58■□□□□ 0.41
SGCA-201ENST00000262018 FAM9BQ8IZU0 186 aa17.58■□□□□ 0.41
SGCA-201ENST00000262018 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.41
SGCA-201ENST00000262018 IL13P35225 146 aa17.57■□□□□ 0.4
SGCA-201ENST00000262018 ZNF496Q96IT1 587 aaPredicted RBP17.57■□□□□ 0.4
SGCA-201ENST00000262018 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
SGCA-201ENST00000262018 A1BGP04217 495 aa17.55■□□□□ 0.4
SGCA-201ENST00000262018 BRPF1P55201 1214 aaPredicted RBP17.55■□□□□ 0.4
SGCA-201ENST00000262018 PRPF38BQ5VTL8 546 aaKnown RBP17.55■□□□□ 0.4
SGCA-201ENST00000262018 DZIP3Q86Y13 1208 aaKnown RBP17.55■□□□□ 0.4
SGCA-201ENST00000262018 TRPM7Q96QT4 1865 aa17.55■□□□□ 0.4
SGCA-201ENST00000262018 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
SGCA-201ENST00000262018 HEG1Q9ULI3 1381 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms