RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SEC31AO94979 1220 aaKnown RBP18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 PTH1RQ03431 593 aa18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 IDI1Q13907 227 aa18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 SFPQP23246 707 aaKnown RBP eCLIP18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 CCT2P78371 535 aaKnown RBP18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 RAB11FIP4Q86YS3 637 aa18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 GPATCH3Q96I76 525 aa18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 FTOQ9C0B1 505 aaKnown RBP eCLIP18.71■□□□□ 0.59
PRPF40B-201ENST00000261897 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 AACSQ86V21 672 aa18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 PA2G4Q9UQ80 394 aaKnown RBP18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 RAD50Q92878 1312 aa18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 HSPA4P34932 840 aa18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 RHPN1Q8TCX5 695 aa18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 IQSEC2Q5JU85 1478 aa18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 JAK2O60674 1132 aa18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 SCAND2PQ9GZW5 306 aaPredicted RBP18.7■□□□□ 0.58
PRPF40B-201ENST00000261897 ANKRD65E5RJM6 399 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 PHACTR2O75167 634 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 GPATCH11Q8N954 259 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 CCDC191Q8NCU4 936 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 CHMP4CQ96CF2 233 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 RSPH14Q9UHP6 348 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
PRPF40B-201ENST00000261897 PBRM1Q86U86 1689 aa18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 CCAR1Q8IX12 1150 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 LMOD1P29536 600 aaPredicted RBP18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 TEFQ10587 303 aa18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 RBM8AQ9Y5S9 174 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 MAST1Q9Y2H9 1570 aa18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 CEP57L1Q8IYX8 460 aa18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 DDX19AQ9NUU7 478 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-201ENST00000261897 IBSPP21815 317 aaPredicted RBP18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 MCM6Q14566 821 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 CCDC30Q5VVM6 783 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 BRF1Q92994 677 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 SERPINC1P01008 464 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 TPM4P67936 248 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 NDUFB9Q9Y6M9 179 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 NSD2O96028 1365 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 SGSM2O43147 1006 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 GOLGA8FQ08AF8 430 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 GOLGA8DPQ0D2H9 430 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 C11orf57Q6ZUT1 292 aaPredicted RBP18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 LRRC8AQ8IWT6 810 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 FSIP1Q8NA03 581 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 IPO4Q8TEX9 1081 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 FAM227BQ96M60 508 aa18.67■□□□□ 0.58
PRPF40B-201ENST00000261897 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 RNF20Q5VTR2 975 aa18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 ERO1AQ96HE7 468 aa18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 ZSCAN31Q96LW9 406 aaPredicted RBP18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 IFNKQ9P0W0 207 aa18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
PRPF40B-201ENST00000261897 IL13P35225 146 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 MYO5CQ9NQX4 1742 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 RGS12O14924 1447 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 PTPRCP08575 1304 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 CCDC171Q6TFL3 1326 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 CFAP100Q494V2 611 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 CARD6Q9BX69 1037 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 CFAP74Q9C0B2 1584 aa18.65■□□□□ 0.58
PRPF40B-201ENST00000261897 CTIFO43310 598 aaKnown RBP18.64■□□□□ 0.58
PRPF40B-201ENST00000261897 RAPGEF3O95398 923 aa18.64■□□□□ 0.58
PRPF40B-201ENST00000261897 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-201ENST00000261897 LMOD2Q6P5Q4 547 aa18.64■□□□□ 0.57
PRPF40B-201ENST00000261897 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-201ENST00000261897 POLR3DP05423 398 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-201ENST00000261897 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
PRPF40B-201ENST00000261897 PSMA5P28066 241 aa18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 CHST3Q7LGC8 479 aa18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 DHX37Q8IY37 1157 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 SH2B1Q9NRF2 756 aaPredicted RBP18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 NPHP3Q7Z494 1330 aa18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 RIMS2Q9UQ26 1411 aa18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
PRPF40B-201ENST00000261897 LRRN4CLQ8ND94 238 aa18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 EDC3Q96F86 508 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 TCHHQ07283 1943 aa18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 NAT10Q9H0A0 1025 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 A0A1B0GVL5 298 aa18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 EIF4A2Q14240 407 aaKnown RBP18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 STK38Q15208 465 aa18.62■□□□□ 0.57
PRPF40B-201ENST00000261897 CLCN6P51797 869 aa18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 STX1AQ16623 288 aa18.61■□□□□ 0.57
PRPF40B-201ENST00000261897 CCDC102AQ96A19 550 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms