RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 BIN1O00499 593 aa12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 STX6O43752 255 aa12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
SLC6A4-201ENST00000261707 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 CTNNA3Q9UI47 895 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 TMCO5BA8MYB1 307 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 GJB2P29033 226 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 TDRD12Q587J7 1177 aaKnown RBP12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 MPHOSPH6Q99547 160 aaKnown RBP12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 NACAP1Q9BZK3 213 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 GABPB1Q06547 395 aaPredicted RBP12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 CTNNBL1Q8WYA6 563 aaPredicted RBP12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 EP400NLQ6ZTU2 488 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 TSG101Q99816 390 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 MYO1BO43795 1136 aa12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
SLC6A4-201ENST00000261707 ANO6Q4KMQ2 910 aa12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 LARP1Q6PKG0 1096 aaKnown RBP12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 KIF4AO95239 1232 aa12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 CCDC155Q8N6L0 562 aa12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 SETSIPP0DME0 302 aa12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 NAP1L3Q99457 506 aaPredicted RBP12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 USP5P45974 858 aa12.36□□□□□ -0.43
SLC6A4-201ENST00000261707 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 FSD2A1L4K1 749 aa12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 MX1P20591 662 aa12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 GUCY1B3Q02153 619 aa12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 HOOK3Q86VS8 718 aa12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 CABP2Q9NPB3 220 aa12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 TFIP11Q9UBB9 837 aaKnown RBP12.35□□□□□ -0.43
SLC6A4-201ENST00000261707 ZSCAN25Q6NSZ9 544 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 CCDC129Q6ZRS4 1044 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 C8orf76Q96K31 380 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 RRBP1Q9P2E9 1410 aaKnown RBP12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 FAM200AQ8TCP9 573 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 PHACTR2O75167 634 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 FGFR1OPO95684 399 aaKnown RBP12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 FAM114A1Q8IWE2 563 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 FAM76AQ8TAV0 307 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 FGD6Q6ZV73 1430 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 SRGAP3O43295 1099 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 UBASH3AP57075 661 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 ANAPC15P60006 121 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 HDXQ7Z353 690 aa12.34□□□□□ -0.43
SLC6A4-201ENST00000261707 A0A1W2PRG0 241 aa12.33□□□□□ -0.43
SLC6A4-201ENST00000261707 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.43
SLC6A4-201ENST00000261707 ZEB2O60315 1214 aa12.33□□□□□ -0.43
SLC6A4-201ENST00000261707 MXRA7P84157 204 aa12.33□□□□□ -0.43
SLC6A4-201ENST00000261707 CTAGE9A4FU28 777 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 SWAP70Q9UH65 585 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 PLEKHH2Q8IVE3 1493 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 PRPF4BQ13523 1007 aaKnown RBP12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 ISM2Q6H9L7 571 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 ZBTB9Q96C00 473 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 PSMD1Q99460 953 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 WDR97A6NE52 1622 aa12.33□□□□□ -0.44
SLC6A4-201ENST00000261707 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 NKTRP30414 1462 aaKnown RBP12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 STARD3NLO95772 234 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 TUBB4BP68371 445 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 BANK1Q8NDB2 785 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 PTGS1P23219 599 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 MIPOL1Q8TD10 442 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 MAP2K2P36507 400 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 PABPN1LA6NDY0 278 aaKnown RBP12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 ZFYP08048 801 aaPredicted RBP12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 MYCBPQ99417 103 aaPredicted RBP12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 CUX1P39880 1505 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 RAB11FIP3O75154 756 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 MYL6BP14649 208 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 CPLX4Q7Z7G2 160 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 SELENOSQ9BQE4 189 aa12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 PHAXQ9H814 394 aaKnown RBP12.32□□□□□ -0.44
SLC6A4-201ENST00000261707 MTIF2P46199 727 aaKnown RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 DNAJC21Q5F1R6 531 aaKnown RBP12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 SYT10Q6XYQ8 523 aa12.31□□□□□ -0.44
SLC6A4-201ENST00000261707 CNPY2Q9Y2B0 182 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms