RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 DUOX2Q9NRD8 1548 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 CDKL5O76039 1030 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 INPP5BP32019 993 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 EFCAB13Q8IY85 973 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 MPNDQ8N594 471 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 TAF4BQ92750 862 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 STX6O43752 255 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 CLTCL1P53675 1640 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 CLASRPQ8N2M8 674 aaKnown RBP9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 SPATS2LQ9NUQ6 558 aaKnown RBP9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 IMPACTQ9P2X3 320 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 MYOM1P52179 1685 aa9.64□□□□□ -0.87
SNCAIP-201ENST00000261367 ZSCAN22P10073 491 aaPredicted RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 SLC8A1P32418 973 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 CLNS1AP54105 237 aaKnown RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 SH2D4BQ5SQS7 431 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 RNF168Q8IYW5 571 aaPredicted RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 ZSCAN16Q9H4T2 348 aaPredicted RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 VPS18Q9P253 973 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 SKIDA1Q1XH10 827 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 BLOC1S2Q6QNY1 142 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 RALYLQ86SE5 291 aaKnown RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 LMNTD2Q8IXW0 634 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 STMN4Q9H169 189 aaPredicted RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 BRD3Q15059 726 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 NCBP3Q53F19 620 aaKnown RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 RBSNQ9H1K0 784 aa9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
SNCAIP-201ENST00000261367 KIDINS220Q9ULH0 1771 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 KIF3CO14782 793 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 ICE2Q659A1 982 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 FAM177A1Q8N128 213 aaPredicted RBP9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 TTC12Q9H892 705 aaPredicted RBP9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 MYO1BO43795 1136 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 GNG11P61952 73 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 NUCB1Q02818 461 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 TRMT1Q9NXH9 659 aaKnown RBP9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 YEATS4O95619 227 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 UBTFL1P0CB47 393 aaPredicted RBP9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 CEP131Q9UPN4 1083 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 ERICH2A1L162 156 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 ZNF853P0CG23 659 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 NAA25Q14CX7 972 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 SPA17Q15506 151 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 C6orf163Q5TEZ5 329 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 TBC1D9Q6ZT07 1266 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 TMC6Q7Z403 805 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 NUP133Q8WUM0 1156 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 ALS2CR12Q96Q35 445 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 IL16Q14005 1332 aa9.62□□□□□ -0.87
SNCAIP-201ENST00000261367 C20orf194Q5TEA3 1177 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 CCDC12Q8WUD4 166 aaPredicted RBP9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 RAB11FIP3O75154 756 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 DDX58O95786 925 aaKnown RBP9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 DDX12PQ92771 950 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 CCDC114Q96M63 670 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 MPHOSPH8Q99549 860 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 CLSTN1O94985 981 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 ZKSCAN8Q15776 578 aaPredicted RBP9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 FAM114A1Q8IWE2 563 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 WASF1Q92558 559 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 PYM1Q9BRP8 204 aaKnown RBP9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 SEPT7Q16181 437 aaKnown RBP9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 HSP90AB2PQ58FF8 381 aa9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 GPR161Q8N6U8 529 aaKnown RBP9.61□□□□□ -0.87
SNCAIP-201ENST00000261367 ATL3Q6DD88 541 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 CCAR1Q8IX12 1150 aaKnown RBP9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 CTAGE1Q96RT6 745 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 DNAI1Q9UI46 699 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 FKBP5Q13451 457 aaPredicted RBP9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 IFT74Q96LB3 600 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 SRGAP3O43295 1099 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 KANK3Q6NY19 840 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 CEP57Q86XR8 500 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 VCXQ9H320 206 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 SENP3Q9H4L4 574 aaPredicted RBP9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 JRKLQ9Y4A0 524 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 CTAGE9A4FU28 777 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 SEPT6Q14141 434 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 MCTP2Q6DN12 878 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 MED4Q9NPJ6 270 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 CEP83Q9Y592 693 aa9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNCAIP-201ENST00000261367 TRPM2O94759 1503 aa9.59□□□□□ -0.87
SNCAIP-201ENST00000261367 A0A087WUV0 522 aaPredicted RBP9.59□□□□□ -0.87
SNCAIP-201ENST00000261367 EPS15P42566 896 aa9.59□□□□□ -0.87
SNCAIP-201ENST00000261367 TTC14Q96N46 770 aa9.59□□□□□ -0.87
SNCAIP-201ENST00000261367 TET3O43151 1660 aa9.59□□□□□ -0.87
SNCAIP-201ENST00000261367 SLFNL1Q499Z3 407 aa9.59□□□□□ -0.87
SNCAIP-201ENST00000261367 USP48Q86UV5 1035 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms