RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 ST5P78524 1137 aa22.31■■□□□ 1.16
CGREF1-201ENST00000260595 ZC3H4Q9UPT8 1303 aaKnown RBP22.31■■□□□ 1.16
CGREF1-201ENST00000260595 HLFQ16534 295 aa22.3■■□□□ 1.16
CGREF1-201ENST00000260595 NBPF5PQ86XG9 351 aaPredicted RBP22.3■■□□□ 1.16
CGREF1-201ENST00000260595 COL11A2P13942 1736 aaPredicted RBP22.3■■□□□ 1.16
CGREF1-201ENST00000260595 KDM2BQ8NHM5 1336 aa22.3■■□□□ 1.16
CGREF1-201ENST00000260595 NPHP1O15259 732 aa22.29■■□□□ 1.16
CGREF1-201ENST00000260595 C21orf2O43822 256 aa22.29■■□□□ 1.16
CGREF1-201ENST00000260595 STYK1Q6J9G0 422 aa22.29■■□□□ 1.16
CGREF1-201ENST00000260595 CNKSR1Q969H4 720 aa22.28■■□□□ 1.16
CGREF1-201ENST00000260595 NIP7Q9Y221 180 aaKnown RBP eCLIP22.28■■□□□ 1.16
CGREF1-201ENST00000260595 CEP350Q5VT06 3117 aa22.28■■□□□ 1.16
CGREF1-201ENST00000260595 MYBBP1AQ9BQG0 1328 aaKnown RBP22.28■■□□□ 1.16
CGREF1-201ENST00000260595 KLRG2A4D1S0 409 aaPredicted RBP22.27■■□□□ 1.16
CGREF1-201ENST00000260595 RIPK4P57078 832 aa22.27■■□□□ 1.16
CGREF1-201ENST00000260595 MASTLQ96GX5 879 aa22.27■■□□□ 1.16
CGREF1-201ENST00000260595 RRAGCQ9HB90 399 aa22.27■■□□□ 1.16
CGREF1-201ENST00000260595 ZNF219Q9P2Y4 722 aaPredicted RBP22.27■■□□□ 1.16
CGREF1-201ENST00000260595 LAMB4A4D0S4 1761 aa22.27■■□□□ 1.16
CGREF1-201ENST00000260595 TMPOP42166 694 aaKnown RBP22.26■■□□□ 1.15
CGREF1-201ENST00000260595 TPTE2Q6XPS3 522 aa22.26■■□□□ 1.15
CGREF1-201ENST00000260595 RBM46Q8TBY0 533 aaKnown RBP22.26■■□□□ 1.15
CGREF1-201ENST00000260595 GLTPD2A6NH11 291 aa22.25■■□□□ 1.15
CGREF1-201ENST00000260595 ERVV-1B6SEH8 477 aa22.25■■□□□ 1.15
CGREF1-201ENST00000260595 PRPF40BQ6NWY9 871 aaKnown RBP22.25■■□□□ 1.15
CGREF1-201ENST00000260595 NGEFQ8N5V2 710 aa22.25■■□□□ 1.15
CGREF1-201ENST00000260595 RRP7AQ9Y3A4 280 aaKnown RBP22.25■■□□□ 1.15
CGREF1-201ENST00000260595 TTLL7Q6ZT98 887 aa22.24■■□□□ 1.15
CGREF1-201ENST00000260595 TSPYL4Q9UJ04 414 aa22.24■■□□□ 1.15
CGREF1-201ENST00000260595 C7orf43Q8WVR3 580 aa22.23■■□□□ 1.15
CGREF1-201ENST00000260595 BABAM1Q9NWV8 329 aa22.23■■□□□ 1.15
CGREF1-201ENST00000260595 MAP3K15Q6ZN16 1313 aa22.23■■□□□ 1.15
CGREF1-201ENST00000260595 LTBP3Q9NS15 1303 aa22.23■■□□□ 1.15
CGREF1-201ENST00000260595 SLX4Q8IY92 1834 aa22.22■■□□□ 1.15
CGREF1-201ENST00000260595 FAM177BA6PVY3 158 aa22.22■■□□□ 1.15
CGREF1-201ENST00000260595 MYL6BP14649 208 aa22.22■■□□□ 1.15
CGREF1-201ENST00000260595 C16orf71Q8IYS4 520 aaPredicted RBP22.22■■□□□ 1.15
CGREF1-201ENST00000260595 NPR1P16066 1061 aa22.21■■□□□ 1.15
CGREF1-201ENST00000260595 APLP1P51693 650 aa22.21■■□□□ 1.15
CGREF1-201ENST00000260595 LRP10Q7Z4F1 713 aa22.21■■□□□ 1.15
CGREF1-201ENST00000260595 ERBB4Q15303 1308 aa22.21■■□□□ 1.15
CGREF1-201ENST00000260595 FER1L6Q2WGJ9 1857 aa22.2■■□□□ 1.14
CGREF1-201ENST00000260595 LMOD3Q0VAK6 560 aa22.2■■□□□ 1.14
CGREF1-201ENST00000260595 FSTL1Q12841 308 aa22.2■■□□□ 1.14
CGREF1-201ENST00000260595 PDIA6Q15084 440 aa22.2■■□□□ 1.14
CGREF1-201ENST00000260595 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
CGREF1-201ENST00000260595 TAOK3Q9H2K8 898 aa22.2■■□□□ 1.14
CGREF1-201ENST00000260595 TNRC6CQ9HCJ0 1690 aaKnown RBP22.2■■□□□ 1.14
CGREF1-201ENST00000260595 SOGA3Q5TF21 947 aa22.19■■□□□ 1.14
CGREF1-201ENST00000260595 UBN2Q6ZU65 1347 aa22.18■■□□□ 1.14
CGREF1-201ENST00000260595 POTECB2RU33 542 aa22.18■■□□□ 1.14
CGREF1-201ENST00000260595 VEGFAP15692 232 aaPredicted RBP22.18■■□□□ 1.14
CGREF1-201ENST00000260595 ERFEQ4G0M1 354 aa22.18■■□□□ 1.14
CGREF1-201ENST00000260595 KIF6Q6ZMV9 814 aa22.18■■□□□ 1.14
CGREF1-201ENST00000260595 ZBTB3Q9H5J0 574 aa22.18■■□□□ 1.14
CGREF1-201ENST00000260595 ARFGEF2Q9Y6D5 1785 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 ABCC12Q96J65 1359 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 ZNF34Q8IZ26 560 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 DNAJC5GQ8N7S2 189 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 NYXQ9GZU5 481 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 TRIM35Q9UPQ4 493 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 TIAM2Q8IVF5 1701 aa22.17■■□□□ 1.14
CGREF1-201ENST00000260595 CCDC88AQ3V6T2 1871 aa22.16■■□□□ 1.14
CGREF1-201ENST00000260595 EIF2S2P20042 333 aaKnown RBP22.16■■□□□ 1.14
CGREF1-201ENST00000260595 GTF2E1P29083 439 aaPredicted RBP22.16■■□□□ 1.14
CGREF1-201ENST00000260595 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
CGREF1-201ENST00000260595 CRY2Q49AN0 593 aa22.16■■□□□ 1.14
CGREF1-201ENST00000260595 GIGYF2Q6Y7W6 1299 aaKnown RBP22.16■■□□□ 1.14
CGREF1-201ENST00000260595 PRKRIP1Q9H875 184 aaPredicted RBP22.16■■□□□ 1.14
CGREF1-201ENST00000260595 CHL1O00533 1208 aa22.15■■□□□ 1.14
CGREF1-201ENST00000260595 GPTP24298 496 aa22.15■■□□□ 1.14
CGREF1-201ENST00000260595 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
CGREF1-201ENST00000260595 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
CGREF1-201ENST00000260595 CCDC93Q567U6 631 aa22.15■■□□□ 1.14
CGREF1-201ENST00000260595 SUSD4Q5VX71 490 aa22.15■■□□□ 1.14
CGREF1-201ENST00000260595 DPY19L2Q6NUT2 758 aa22.15■■□□□ 1.14
CGREF1-201ENST00000260595 IBTKQ9P2D0 1353 aaPredicted RBP22.14■■□□□ 1.14
CGREF1-201ENST00000260595 OLFM4Q6UX06 510 aa22.14■■□□□ 1.13
CGREF1-201ENST00000260595 SMC1BQ8NDV3 1235 aa22.14■■□□□ 1.13
CGREF1-201ENST00000260595 NUP98P52948 1817 aa22.14■■□□□ 1.13
CGREF1-201ENST00000260595 ANXA1P04083 346 aa22.13■■□□□ 1.13
CGREF1-201ENST00000260595 ALDH1B1P30837 517 aa22.13■■□□□ 1.13
CGREF1-201ENST00000260595 CACNA1SQ13698 1873 aa22.12■■□□□ 1.13
CGREF1-201ENST00000260595 NTSR2O95665 410 aa22.12■■□□□ 1.13
CGREF1-201ENST00000260595 FKBP4Q02790 459 aaKnown RBP eCLIP22.12■■□□□ 1.13
CGREF1-201ENST00000260595 KRT24Q2M2I5 525 aa22.12■■□□□ 1.13
CGREF1-201ENST00000260595 RIC1Q4ADV7 1423 aa22.12■■□□□ 1.13
CGREF1-201ENST00000260595 DICER1Q9UPY3 1922 aaKnown RBP22.12■■□□□ 1.13
CGREF1-201ENST00000260595 WDR90Q96KV7 1748 aa22.11■■□□□ 1.13
CGREF1-201ENST00000260595 DDNO94850 711 aaPredicted RBP22.1■■□□□ 1.13
CGREF1-201ENST00000260595 HOXA10P31260 410 aaPredicted RBP22.1■■□□□ 1.13
CGREF1-201ENST00000260595 HTRA3P83110 453 aa22.1■■□□□ 1.13
CGREF1-201ENST00000260595 RTKN2Q8IZC4 609 aa22.1■■□□□ 1.13
CGREF1-201ENST00000260595 SNED1Q8TER0 1413 aa22.1■■□□□ 1.13
CGREF1-201ENST00000260595 PARP10Q53GL7 1025 aa22.09■■□□□ 1.13
CGREF1-201ENST00000260595 COPS6Q7L5N1 327 aa22.09■■□□□ 1.13
CGREF1-201ENST00000260595 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms