RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 RETREG2Q8NC44 543 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 GOLGA1Q92805 767 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 BICD1Q96G01 975 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 TSG101Q99816 390 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 ADGRL1O94910 1474 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 NSD3Q9BZ95 1437 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 STX6O43752 255 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 STAMBPO95630 424 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 ATP2B1P20020 1258 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 GNAQP50148 359 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 C1orf228Q6PIY5 440 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 DPP8Q6V1X1 898 aaPredicted RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 NSFL1CQ9UNZ2 370 aaKnown RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 KCNH4Q9UQ05 1017 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 SNAPC4Q5SXM2 1469 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 MYBBP1AQ9BQG0 1328 aaKnown RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 TOP2AP11388 1531 aaKnown RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 NOP56O00567 594 aaKnown RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 HMGB3O15347 200 aaKnown RBP4.7□□□□□ -1.66
RNF38-201ENST00000259605 ZBED4O75132 1171 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 OSBPP22059 807 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 SNX16P57768 344 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 NLRP5P59047 1200 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 DLGAP5Q15398 846 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 MAP3K11Q16584 847 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 JAKMIP3Q5VZ66 844 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 ABI1Q8IZP0 508 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 TSNARE1Q96NA8 513 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 NIP7Q9Y221 180 aaKnown RBP eCLIP4.7□□□□□ -1.66
RNF38-201ENST00000259605 NR2E3Q9Y5X4 410 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 UHRF1BP1LA0JNW5 1464 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 BICRAQ9NZM4 1560 aa4.7□□□□□ -1.66
RNF38-201ENST00000259605 FAM83GA6ND36 823 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 SNRPA1P09661 255 aaKnown RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 SSR1P43307 286 aaKnown RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 SETQ01105 290 aaPredicted RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 NOLC1Q14978 699 aaKnown RBP eCLIP4.69□□□□□ -1.66
RNF38-201ENST00000259605 PARP10Q53GL7 1025 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 FAM47CQ5HY64 1035 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 NBPF11Q86T75 865 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 ALS2CR12Q96Q35 445 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 KCNG1Q9UIX4 513 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 LRFN2Q9ULH4 789 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 NCKAP5LQ9HCH0 1330 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 ARHGEF37A1IGU5 675 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 CASTP20810 708 aaKnown RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 ACTN2P35609 894 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 DNM2P50570 870 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 CERKQ8TCT0 537 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 L3MBTL2Q969R5 705 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 AP5M1Q9H0R1 490 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 C6orf50Q9HD87 102 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 BTG4Q9NY30 223 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 PPIP5K2O43314 1243 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 KCNA6P17658 529 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 CCDC125Q86Z20 511 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 LEO1Q8WVC0 666 aaPredicted RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 CWC25Q9NXE8 425 aaPredicted RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 WWC3Q9ULE0 1092 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 TTC21BQ7Z4L5 1316 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 PRDM2Q13029 1718 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 SENP3-EIF4A1A0A087X0R7 540 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 MINDY4BA8MYZ0 360 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 PRKAR2BP31323 418 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 RABEP1Q15276 862 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 FAM98CQ17RN3 349 aaKnown RBP4.69□□□□□ -1.66
RNF38-201ENST00000259605 ANKRD24Q8TF21 1146 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 SDF4Q9BRK5 362 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 SLAIN2Q9P270 581 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 PNMA3Q9UL41 463 aa4.69□□□□□ -1.66
RNF38-201ENST00000259605 CUX1P39880 1505 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 LIG1P18858 919 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 DALRD3Q5D0E6 543 aaKnown RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 SASS6Q6UVJ0 657 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 LDHAL6AQ6ZMR3 332 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 CATIPQ7Z7H3 387 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 HOOK3Q86VS8 718 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 TRIM6Q9C030 488 aaPredicted RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 CCDC194A0A1B0GVG4 234 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 BRD2P25440 801 aaKnown RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 NUDT18Q6ZVK8 323 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 SMARCC2Q8TAQ2 1214 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 CAGE1Q8TC20 777 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 NAP1L4Q99733 375 aaKnown RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 KAT14Q9H8E8 782 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 CD2APQ9Y5K6 639 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 MAGI1Q96QZ7 1491 aaPredicted RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 PHACTR2O75167 634 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 TAF7Q15545 349 aaPredicted RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 CHRNA2Q15822 529 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 TMC4Q7Z404 712 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 AACSQ86V21 672 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 MCF2L2Q86YR7 1114 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 CDAN1Q8IWY9 1227 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 GABPB2Q8TAK5 448 aaPredicted RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 GCNAQ96QF7 691 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 AZI2Q9H6S1 392 aa4.68□□□□□ -1.66
RNF38-201ENST00000259605 CACYBPQ9HB71 228 aaKnown RBP4.68□□□□□ -1.66
RNF38-201ENST00000259605 GGA1Q9UJY5 639 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms