RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 CCDC96Q2M329 555 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 PPP1R42Q7Z4L9 355 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 SNRKQ9NRH2 765 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 ZNF213O14771 459 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 PANK2Q9BZ23 570 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 ZNF287Q9HBT7 754 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 CCDC194A0A1B0GVG4 234 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 WASLO00401 505 aaPredicted RBP15.56■□□□□ 0.08
ALPK3-201ENST00000258888 MICU3Q86XE3 530 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 TRMT112Q9UI30 125 aaKnown RBP15.56■□□□□ 0.08
ALPK3-201ENST00000258888 ZNF652Q9Y2D9 606 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 MAP3K1Q13233 1512 aa15.56■□□□□ 0.08
ALPK3-201ENST00000258888 CRACR2BQ8N4Y2 399 aaPredicted RBP15.56■□□□□ 0.08
ALPK3-201ENST00000258888 ZSCAN23Q3MJ62 389 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 CCDC178Q5BJE1 867 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 CGNQ9P2M7 1197 aaKnown RBP15.55■□□□□ 0.08
ALPK3-201ENST00000258888 TMOD2Q9NZR1 351 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 USP8P40818 1118 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 VPS36Q86VN1 386 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 ZBTB3Q9H5J0 574 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 NSD2O96028 1365 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 UBE3BQ7Z3V4 1068 aa15.55■□□□□ 0.08
ALPK3-201ENST00000258888 HCLS1P14317 486 aaPredicted RBP15.54■□□□□ 0.08
ALPK3-201ENST00000258888 ZNF165P49910 485 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 SHTN1A0MZ66 631 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 IQCA1Q86XH1 822 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.54■□□□□ 0.08
ALPK3-201ENST00000258888 YEATS4O95619 227 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 DYDC1Q8WWB3 177 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 ZPR1O75312 459 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 GPTP24298 496 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
ALPK3-201ENST00000258888 PIP4K2BP78356 416 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 CATIPQ7Z7H3 387 aa15.54■□□□□ 0.08
ALPK3-201ENST00000258888 PIK3R4Q99570 1358 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 ANKRD18BA2A2Z9 1011 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 NUCB1Q02818 461 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 ISM2Q6H9L7 571 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 POTEJP0CG39 1038 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 ATP5J2-PTCD1G3V325 749 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 NEMFO60524 1076 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
ALPK3-201ENST00000258888 GSDMDP57764 484 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 UBE2HP62256 183 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 RNF41Q9H4P4 317 aaPredicted RBP15.53■□□□□ 0.08
ALPK3-201ENST00000258888 IBSPP21815 317 aaPredicted RBP15.53■□□□□ 0.08
ALPK3-201ENST00000258888 ORC3Q9UBD5 711 aaPredicted RBP15.53■□□□□ 0.08
ALPK3-201ENST00000258888 IFFO1Q0D2I5 559 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 GOPCQ9HD26 462 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 TMEM266Q2M3C6 531 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 TDRD12Q587J7 1177 aaKnown RBP15.53■□□□□ 0.08
ALPK3-201ENST00000258888 PHF8Q9UPP1 1060 aa15.53■□□□□ 0.08
ALPK3-201ENST00000258888 MACROD2A1Z1Q3 448 aa15.52■□□□□ 0.08
ALPK3-201ENST00000258888 JARID2Q92833 1246 aaPredicted RBP15.52■□□□□ 0.08
ALPK3-201ENST00000258888 TMEM67Q5HYA8 995 aa15.52■□□□□ 0.08
ALPK3-201ENST00000258888 ANXA1P04083 346 aa15.52■□□□□ 0.08
ALPK3-201ENST00000258888 TRERF1Q96PN7 1200 aa15.52■□□□□ 0.08
ALPK3-201ENST00000258888 PPP4R3BQ5MIZ7 849 aa15.52■□□□□ 0.08
ALPK3-201ENST00000258888 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.07
ALPK3-201ENST00000258888 NLRP5P59047 1200 aa15.52■□□□□ 0.07
ALPK3-201ENST00000258888 KLHL40Q2TBA0 621 aa15.52■□□□□ 0.07
ALPK3-201ENST00000258888 GIMAP6Q6P9H5 292 aa15.52■□□□□ 0.07
ALPK3-201ENST00000258888 PI4KAP2A4QPH2 592 aa15.52■□□□□ 0.07
ALPK3-201ENST00000258888 DESP17661 470 aa15.52■□□□□ 0.07
ALPK3-201ENST00000258888 MTIF2P46199 727 aaKnown RBP15.52■□□□□ 0.07
ALPK3-201ENST00000258888 PI4KAP1Q8N8J0 262 aa15.52■□□□□ 0.07
ALPK3-201ENST00000258888 SNW1Q13573 536 aaKnown RBP15.52■□□□□ 0.07
ALPK3-201ENST00000258888 TNIP1Q15025 636 aa15.52■□□□□ 0.07
ALPK3-201ENST00000258888 CNPY2Q9Y2B0 182 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 SPTY2D1Q68D10 685 aaPredicted RBP15.51■□□□□ 0.07
ALPK3-201ENST00000258888 FOXO3O43524 673 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 FBXO31Q5XUX0 539 aaPredicted RBP15.51■□□□□ 0.07
ALPK3-201ENST00000258888 RALGAPBQ86X10 1494 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 FGFR1OPO95684 399 aaKnown RBP15.51■□□□□ 0.07
ALPK3-201ENST00000258888 SDSP20132 328 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 NECAB1Q8N987 351 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 FBLN1P23142 703 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 CTNNBL1Q8WYA6 563 aaPredicted RBP15.51■□□□□ 0.07
ALPK3-201ENST00000258888 GSTTP1A0A1W2PQM5 241 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 RAB34Q9BZG1 259 aa15.51■□□□□ 0.07
ALPK3-201ENST00000258888 CD109Q6YHK3 1445 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 MCM5P33992 734 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 INCENPQ9NQS7 918 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 CETN2P41208 172 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 TMX3Q96JJ7 454 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 NEBLO76041 1014 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 MCM3P25205 808 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 LRRC2Q9BYS8 371 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 USO1O60763 962 aaKnown RBP15.5■□□□□ 0.07
ALPK3-201ENST00000258888 LIG1P18858 919 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.07
ALPK3-201ENST00000258888 TCEANC2Q96MN5 208 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 ALS2CR12Q96Q35 445 aa15.5■□□□□ 0.07
ALPK3-201ENST00000258888 SLC4A8Q2Y0W8 1093 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 PCDHB15Q9Y5E8 787 aa15.49■□□□□ 0.07
ALPK3-201ENST00000258888 IARSP41252 1262 aaKnown RBP15.49■□□□□ 0.07
ALPK3-201ENST00000258888 SLC26A6Q9BXS9 759 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms