RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 G3BP1Q13283 466 aaKnown RBP eCLIP14.5□□□□□ -0.09
USP30-201ENST00000257548 ZSCAN25Q6NSZ9 544 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 PPP6R1Q9UPN7 881 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 SERPINC1P01008 464 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 ANAPC15P60006 121 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 ZNF397Q8NF99 534 aaPredicted RBP14.5□□□□□ -0.09
USP30-201ENST00000257548 SNX14Q9Y5W7 946 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 CEP152O94986 1710 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 CCT2P78371 535 aaKnown RBP14.5□□□□□ -0.09
USP30-201ENST00000257548 HSP90AB2PQ58FF8 381 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 CEP57L1Q8IYX8 460 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 ABCC4O15439 1325 aa14.5□□□□□ -0.09
USP30-201ENST00000257548 KIDINS220Q9ULH0 1771 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 LMAN1P49257 510 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 CDC37L1Q7L3B6 337 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 CACTINQ8WUQ7 758 aaKnown RBP14.49□□□□□ -0.09
USP30-201ENST00000257548 TET3O43151 1660 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 TAF7Q15545 349 aaPredicted RBP14.49□□□□□ -0.09
USP30-201ENST00000257548 MROH1Q8NDA8 1641 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 NAT10Q9H0A0 1025 aaKnown RBP14.49□□□□□ -0.09
USP30-201ENST00000257548 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 SLU7O95391 586 aaKnown RBP14.49□□□□□ -0.09
USP30-201ENST00000257548 TTC6Q86TZ1 520 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 GOLGA6L1Q8N7Z2 621 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 KCNF1Q9H3M0 494 aa14.49□□□□□ -0.09
USP30-201ENST00000257548 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
USP30-201ENST00000257548 EFCAB6Q5THR3 1501 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 BMS1Q14692 1282 aaKnown RBP14.48□□□□□ -0.09
USP30-201ENST00000257548 AOPEPQ8N6M6 819 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 NEK11Q8NG66 645 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 RHPN1Q8TCX5 695 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 TOMM22Q9NS69 142 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 ZNF330Q9Y3S2 320 aaPredicted RBP14.48□□□□□ -0.09
USP30-201ENST00000257548 SYNMO15061 1565 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 LARGE1O95461 756 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 ATP2B1P20020 1258 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 ZSCAN31Q96LW9 406 aaPredicted RBP14.48□□□□□ -0.09
USP30-201ENST00000257548 INO80Q9ULG1 1556 aaPredicted RBP14.48□□□□□ -0.09
USP30-201ENST00000257548 IQGAP1P46940 1657 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 PES1O00541 588 aaKnown RBP14.48□□□□□ -0.09
USP30-201ENST00000257548 RAB11FIP4Q86YS3 637 aa14.48□□□□□ -0.09
USP30-201ENST00000257548 ZNF75DP51815 510 aa14.47□□□□□ -0.09
USP30-201ENST00000257548 STK38Q15208 465 aa14.47□□□□□ -0.09
USP30-201ENST00000257548 CFAP100Q494V2 611 aa14.47□□□□□ -0.09
USP30-201ENST00000257548 RUFY3Q7L099 469 aa14.47□□□□□ -0.09
USP30-201ENST00000257548 DDX19AQ9NUU7 478 aaKnown RBP14.47□□□□□ -0.09
USP30-201ENST00000257548 LARP1Q6PKG0 1096 aaKnown RBP14.47□□□□□ -0.09
USP30-201ENST00000257548 KIF1BPQ96EK5 621 aa14.47□□□□□ -0.09
USP30-201ENST00000257548 CPLX1O14810 134 aa14.46□□□□□ -0.09
USP30-201ENST00000257548 BRPF1P55201 1214 aaPredicted RBP14.46□□□□□ -0.09
USP30-201ENST00000257548 PA2G4Q9UQ80 394 aaKnown RBP14.46□□□□□ -0.09
USP30-201ENST00000257548 NR1I2O75469 434 aa14.46□□□□□ -0.09
USP30-201ENST00000257548 CEBPAP49715 358 aaPredicted RBP14.46□□□□□ -0.09
USP30-201ENST00000257548 CCAR1Q8IX12 1150 aaKnown RBP14.46□□□□□ -0.09
USP30-201ENST00000257548 FSIP1Q8NA03 581 aa14.46□□□□□ -0.09
USP30-201ENST00000257548 GTF2E1P29083 439 aaPredicted RBP14.45□□□□□ -0.1
USP30-201ENST00000257548 LMOD1P29536 600 aaPredicted RBP14.45□□□□□ -0.1
USP30-201ENST00000257548 ADCK5Q3MIX3 580 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 SYNE3Q6ZMZ3 975 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 NEUROD6Q96NK8 337 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
USP30-201ENST00000257548 ABCA9Q8IUA7 1624 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 GABPB1Q06547 395 aaPredicted RBP14.45□□□□□ -0.1
USP30-201ENST00000257548 CUL4AQ13619 759 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 PTPN21Q16825 1174 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 SH2B1Q9NRF2 756 aaPredicted RBP14.45□□□□□ -0.1
USP30-201ENST00000257548 RTL1A6NKG5 1358 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 PHACTR2O75167 634 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 GLRX3O76003 335 aaKnown RBP14.45□□□□□ -0.1
USP30-201ENST00000257548 POLR3DP05423 398 aaPredicted RBP14.45□□□□□ -0.1
USP30-201ENST00000257548 MCM6Q14566 821 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 MTMR6Q9Y217 621 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 PTPRCP08575 1304 aa14.45□□□□□ -0.1
USP30-201ENST00000257548 BRF1Q92994 677 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
USP30-201ENST00000257548 CFAP45Q9UL16 551 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 KDM5AP29375 1690 aaKnown RBP14.44□□□□□ -0.1
USP30-201ENST00000257548 IBSPP21815 317 aaPredicted RBP14.44□□□□□ -0.1
USP30-201ENST00000257548 LEKR1Q6ZMV7 388 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 AP5Z1O43299 807 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 ME3Q16798 604 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 HSP90B2PQ58FF3 399 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 MYOM1P52179 1685 aa14.44□□□□□ -0.1
USP30-201ENST00000257548 USP27XA6NNY8 438 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 USHBP1Q8N6Y0 703 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 CCDC102AQ96A19 550 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 RNF216Q9NWF9 866 aaPredicted RBP14.43□□□□□ -0.1
USP30-201ENST00000257548 MRVI1Q9Y6F6 885 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 HSPA4P34932 840 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 ATP8B2P98198 1209 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 FBXO38Q6PIJ6 1188 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 DHX37Q8IY37 1157 aaKnown RBP14.43□□□□□ -0.1
USP30-201ENST00000257548 GPATCH11Q8N954 259 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 SLC26A8Q96RN1 970 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 NSD2O96028 1365 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 CTNNA3Q9UI47 895 aa14.43□□□□□ -0.1
USP30-201ENST00000257548 FRMPD1Q5SYB0 1578 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms