RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 TAF4BQ92750 862 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
DCLK1-201ENST00000255448 EIF5P55010 431 aaKnown RBP12.67□□□□□ -0.38
DCLK1-201ENST00000255448 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 MYCBPQ99417 103 aaPredicted RBP12.67□□□□□ -0.38
DCLK1-201ENST00000255448 ZNF652Q9Y2D9 606 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
DCLK1-201ENST00000255448 IMMTQ16891 758 aaKnown RBP12.66□□□□□ -0.38
DCLK1-201ENST00000255448 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 TRIM22Q8IYM9 498 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 CTNNA3Q9UI47 895 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 MTMR7Q9Y216 660 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 CTAGE5O15320 804 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 RAB3GAP1Q15042 981 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 AACSQ86V21 672 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 CCDC150Q8NCX0 1101 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 A0A1B0GUA9 196 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 ATRIPQ8WXE1 791 aa12.66□□□□□ -0.38
DCLK1-201ENST00000255448 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
DCLK1-201ENST00000255448 SCAF11Q99590 1463 aaKnown RBP12.66□□□□□ -0.38
DCLK1-201ENST00000255448 IGHMBP2P38935 993 aaKnown RBP12.65□□□□□ -0.38
DCLK1-201ENST00000255448 STX1AQ16623 288 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 SPECC1Q5M775 1068 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 C17orf53Q8N3J3 647 aaPredicted RBP12.65□□□□□ -0.38
DCLK1-201ENST00000255448 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
DCLK1-201ENST00000255448 STIM1Q13586 685 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 BIVM-ERCC5R4GMW8 1640 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 STX6O43752 255 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 MX1P20591 662 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.38
DCLK1-201ENST00000255448 FAM200AQ8TCP9 573 aa12.65□□□□□ -0.38
DCLK1-201ENST00000255448 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.39
DCLK1-201ENST00000255448 BIN1O00499 593 aa12.65□□□□□ -0.39
DCLK1-201ENST00000255448 MAP2K2P36507 400 aa12.65□□□□□ -0.39
DCLK1-201ENST00000255448 PAFAH1B1P43034 410 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
DCLK1-201ENST00000255448 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
DCLK1-201ENST00000255448 TAF7Q15545 349 aaPredicted RBP12.64□□□□□ -0.39
DCLK1-201ENST00000255448 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 MAATS1Q7Z4T9 603 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 TNRQ92752 1358 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 USP48Q86UV5 1035 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 PPP1R1BQ9UD71 204 aaPredicted RBP12.64□□□□□ -0.39
DCLK1-201ENST00000255448 TTC21BQ7Z4L5 1316 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 DNA2P51530 1060 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 FOXO3O43524 673 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 KRT32Q14532 448 aa12.64□□□□□ -0.39
DCLK1-201ENST00000255448 SPA17Q15506 151 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 SPECC1LQ69YQ0 1117 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
DCLK1-201ENST00000255448 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
DCLK1-201ENST00000255448 KLHL10Q6JEL2 608 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 NME9Q86XW9 330 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 PPM1EQ8WY54 764 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 RSRC1Q96IZ7 334 aaKnown RBP12.63□□□□□ -0.39
DCLK1-201ENST00000255448 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 HLTFQ14527 1009 aaKnown RBP eCLIP12.63□□□□□ -0.39
DCLK1-201ENST00000255448 CCAR1Q8IX12 1150 aaKnown RBP12.63□□□□□ -0.39
DCLK1-201ENST00000255448 C14orf93Q9H972 538 aaKnown RBP12.63□□□□□ -0.39
DCLK1-201ENST00000255448 NOS1P29475 1434 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 IL1RAPL2Q9NP60 686 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
DCLK1-201ENST00000255448 SEC24BO95487 1268 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 SYT10Q6XYQ8 523 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CCDC114Q96M63 670 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CCDC69A6NI79 296 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CDKL5O76039 1030 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CAVIN2O95810 425 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CCDC121Q6ZUS5 278 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 ERO1AQ96HE7 468 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 PAIP2Q9BPZ3 127 aaKnown RBP12.62□□□□□ -0.39
DCLK1-201ENST00000255448 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 HSF2BPO75031 334 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 MATR3P43243 847 aaKnown RBP eCLIP12.62□□□□□ -0.39
DCLK1-201ENST00000255448 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 SNX21Q969T3 373 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 PLCH2O75038 1416 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CTAGE15A4D2H0 777 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CTAGE8P0CG41 777 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CLNS1AP54105 237 aaKnown RBP12.62□□□□□ -0.39
DCLK1-201ENST00000255448 FKBP4Q02790 459 aaKnown RBP eCLIP12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CTAGE6Q86UF2 777 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CTAGE4Q8IX94 777 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 FSIP1Q8NA03 581 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 GOLGA1Q92805 767 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
DCLK1-201ENST00000255448 RAB11FIP3O75154 756 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms