RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 ANKRD36CQ5JPF3 1778 aa11.25□□□□□ -0.61
RPA1-201ENST00000254719 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
RPA1-201ENST00000254719 TNS2Q63HR2 1409 aa11.25□□□□□ -0.61
RPA1-201ENST00000254719 RREB1Q92766 1687 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 DCCP43146 1447 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 MX1P20591 662 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 FAM43AQ8N2R8 423 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 PA2G4Q9UQ80 394 aaKnown RBP11.24□□□□□ -0.61
RPA1-201ENST00000254719 PTH1RQ03431 593 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 ADCK5Q3MIX3 580 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 PLCH1Q4KWH8 1693 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 FKBP5Q13451 457 aaPredicted RBP11.24□□□□□ -0.61
RPA1-201ENST00000254719 CCDC30Q5VVM6 783 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
RPA1-201ENST00000254719 HOXB7P09629 217 aa11.23□□□□□ -0.61
RPA1-201ENST00000254719 CABLES1Q8TDN4 633 aa11.23□□□□□ -0.61
RPA1-201ENST00000254719 SUCLG2Q96I99 432 aa11.23□□□□□ -0.61
RPA1-201ENST00000254719 HSPA4P34932 840 aa11.23□□□□□ -0.61
RPA1-201ENST00000254719 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
RPA1-201ENST00000254719 KLHDC4Q8TBB5 520 aa11.23□□□□□ -0.61
RPA1-201ENST00000254719 MAP4K4O95819 1239 aaPredicted RBP11.23□□□□□ -0.61
RPA1-201ENST00000254719 HDGFL1Q5TGJ6 251 aa11.23□□□□□ -0.61
RPA1-201ENST00000254719 COL5A2P05997 1499 aaPredicted RBP11.23□□□□□ -0.61
RPA1-201ENST00000254719 MYH7P12883 1935 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 PIP4K2AP48426 406 aaPredicted RBP11.22□□□□□ -0.61
RPA1-201ENST00000254719 RHPN1Q8TCX5 695 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 NUP98P52948 1817 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 NBPF26B4DH59 902 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 FOXP2O15409 715 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 CPA1P15085 419 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 KCNA4P22459 653 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 NBPF14Q5TI25 921 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 NBPF10Q6P3W6 841 aaKnown RBP11.22□□□□□ -0.61
RPA1-201ENST00000254719 NBPF15Q8N660 670 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 PALLDQ8WX93 1383 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 TMX3Q96JJ7 454 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
RPA1-201ENST00000254719 CPDO75976 1380 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
RPA1-201ENST00000254719 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.61
RPA1-201ENST00000254719 PHKG2P15735 406 aa11.21□□□□□ -0.61
RPA1-201ENST00000254719 SGSM2O43147 1006 aa11.21□□□□□ -0.61
RPA1-201ENST00000254719 EAF2Q96CJ1 260 aaPredicted RBP11.21□□□□□ -0.61
RPA1-201ENST00000254719 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.61
RPA1-201ENST00000254719 MYH3P11055 1940 aa11.21□□□□□ -0.61
RPA1-201ENST00000254719 RUFY3Q7L099 469 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 TMEM63CQ9P1W3 806 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 MYH14Q7Z406 1995 aaKnown RBP11.21□□□□□ -0.62
RPA1-201ENST00000254719 TNS3Q68CZ2 1445 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 C4AP0C0L4 1744 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 C4BP0C0L5 1744 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 NRAPQ86VF7 1730 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 A0A0G2JLW4 131 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 AOX1Q06278 1338 aa11.21□□□□□ -0.62
RPA1-201ENST00000254719 ARAP2Q8WZ64 1704 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 BRD1O95696 1058 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 OS9Q13438 667 aaPredicted RBP11.2□□□□□ -0.62
RPA1-201ENST00000254719 SNX14Q9Y5W7 946 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 SLFNL1Q499Z3 407 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 MAP3K2Q9Y2U5 619 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 DOCK2Q92608 1830 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 TPRNQ4KMQ1 711 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
RPA1-201ENST00000254719 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
RPA1-201ENST00000254719 MED23Q9ULK4 1368 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 ERC2O15083 957 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 NECTIN1Q15223 517 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 SKOR2Q2VWA4 1001 aaPredicted RBP11.19□□□□□ -0.62
RPA1-201ENST00000254719 LRP5O75197 1615 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 CICQ96RK0 1608 aaPredicted RBP11.19□□□□□ -0.62
RPA1-201ENST00000254719 TAF1P21675 1872 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 MPNDQ8N594 471 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 BICC1Q9H694 974 aaKnown RBP11.19□□□□□ -0.62
RPA1-201ENST00000254719 RAD50Q92878 1312 aa11.19□□□□□ -0.62
RPA1-201ENST00000254719 RABEP1Q15276 862 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
RPA1-201ENST00000254719 ZNF530Q6P9A1 599 aaPredicted RBP11.18□□□□□ -0.62
RPA1-201ENST00000254719 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 LRP6O75581 1613 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 EIF2S2P20042 333 aaKnown RBP11.18□□□□□ -0.62
RPA1-201ENST00000254719 EDC3Q96F86 508 aaKnown RBP11.18□□□□□ -0.62
RPA1-201ENST00000254719 ROBO1Q9Y6N7 1651 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 PSME1Q06323 249 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 KIAA1211Q6ZU35 1233 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 KCNH5Q8NCM2 988 aa11.18□□□□□ -0.62
RPA1-201ENST00000254719 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
RPA1-201ENST00000254719 COL22A1Q8NFW1 1626 aaPredicted RBP11.17□□□□□ -0.62
RPA1-201ENST00000254719 ST18O60284 1047 aa11.17□□□□□ -0.62
RPA1-201ENST00000254719 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
RPA1-201ENST00000254719 GADD45BO75293 160 aaPredicted RBP11.17□□□□□ -0.62
RPA1-201ENST00000254719 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms