RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 EVI5LQ96CN4 794 aa20.69■□□□□ 0.9
NDFIP1-201ENST00000253814 FAM200AQ8TCP9 573 aa20.69■□□□□ 0.9
NDFIP1-201ENST00000253814 TYRO3Q06418 890 aa20.68■□□□□ 0.9
NDFIP1-201ENST00000253814 SGSM2O43147 1006 aa20.68■□□□□ 0.9
NDFIP1-201ENST00000253814 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
NDFIP1-201ENST00000253814 PTPN14Q15678 1187 aa20.68■□□□□ 0.9
NDFIP1-201ENST00000253814 ERICH4A6NGS2 130 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 BIN1O00499 593 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 FKBP4Q02790 459 aaKnown RBP eCLIP20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 TRDNQ13061 729 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 PIP4K2AP48426 406 aaPredicted RBP20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 RAB11FIP4Q86YS3 637 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 USP44Q9H0E7 712 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 EDC4Q6P2E9 1401 aaKnown RBP20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 ZC3H6P61129 1189 aaKnown RBP20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 NMIQ13287 307 aaPredicted RBP20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 NFXL1Q6ZNB6 911 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 RASEFQ8IZ41 740 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 MYD88Q99836 296 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 TET3O43151 1660 aa20.67■□□□□ 0.9
NDFIP1-201ENST00000253814 PES1O00541 588 aaKnown RBP20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 ISM2Q6H9L7 571 aa20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 CPLX2Q6PUV4 134 aaKnown RBP20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 ZNF396Q96N95 335 aaPredicted RBP20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 CEP57L1Q8IYX8 460 aa20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 PIBF1Q8WXW3 757 aa20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 BRF1Q92994 677 aa20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 HSPA4P34932 840 aa20.66■□□□□ 0.9
NDFIP1-201ENST00000253814 AK9Q5TCS8 1911 aa20.65■□□□□ 0.9
NDFIP1-201ENST00000253814 TNNT3P45378 269 aaPredicted RBP20.65■□□□□ 0.9
NDFIP1-201ENST00000253814 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
NDFIP1-201ENST00000253814 FAM227BQ96M60 508 aa20.65■□□□□ 0.9
NDFIP1-201ENST00000253814 DDX19AQ9NUU7 478 aaKnown RBP20.65■□□□□ 0.9
NDFIP1-201ENST00000253814 TRIM29Q14134 588 aa20.64■□□□□ 0.9
NDFIP1-201ENST00000253814 KLHDC4Q8TBB5 520 aa20.64■□□□□ 0.9
NDFIP1-201ENST00000253814 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.89
NDFIP1-201ENST00000253814 FAM135BQ49AJ0 1406 aa20.64■□□□□ 0.89
NDFIP1-201ENST00000253814 RAD50Q92878 1312 aa20.64■□□□□ 0.89
NDFIP1-201ENST00000253814 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
NDFIP1-201ENST00000253814 CCDC94Q9BW85 323 aaPredicted RBP20.64■□□□□ 0.89
NDFIP1-201ENST00000253814 KRT32Q14532 448 aa20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 RIOK3O14730 519 aaKnown RBP20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 PTCD1O75127 700 aaKnown RBP20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 SERPINC1P01008 464 aa20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 MYRIPQ8NFW9 859 aa20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 LRRC59Q96AG4 307 aaKnown RBP20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 NDUFB9Q9Y6M9 179 aa20.63■□□□□ 0.89
NDFIP1-201ENST00000253814 DDIT3P35638 169 aa20.62■□□□□ 0.89
NDFIP1-201ENST00000253814 PTCH1Q13635 1447 aa20.62■□□□□ 0.89
NDFIP1-201ENST00000253814 IBTKQ9P2D0 1353 aaPredicted RBP20.62■□□□□ 0.89
NDFIP1-201ENST00000253814 TTLL5Q6EMB2 1281 aa20.62■□□□□ 0.89
NDFIP1-201ENST00000253814 FSIP1Q8NA03 581 aa20.62■□□□□ 0.89
NDFIP1-201ENST00000253814 IQSEC2Q5JU85 1478 aa20.62■□□□□ 0.89
NDFIP1-201ENST00000253814 IQGAP1P46940 1657 aa20.62■□□□□ 0.89
NDFIP1-201ENST00000253814 SHROOM2Q13796 1616 aa20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 ZCCHC11Q5TAX3 1644 aaKnown RBP20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 PTH1RQ03431 593 aa20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 RUFY3Q7L099 469 aa20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 NEK1Q96PY6 1258 aa20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 LARP1Q6PKG0 1096 aaKnown RBP20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 SLC39A6Q13433 755 aa20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 CCAR1Q8IX12 1150 aaKnown RBP20.61■□□□□ 0.89
NDFIP1-201ENST00000253814 POLR3DP05423 398 aaPredicted RBP20.6■□□□□ 0.89
NDFIP1-201ENST00000253814 U2AF2P26368 475 aaKnown RBP eCLIP20.6■□□□□ 0.893e-8■■■■□ 20.5
NDFIP1-201ENST00000253814 LGR6Q9HBX8 967 aa20.6■□□□□ 0.89
NDFIP1-201ENST00000253814 TULP1O00294 542 aaPredicted RBP20.6■□□□□ 0.89
NDFIP1-201ENST00000253814 CDC37L1Q7L3B6 337 aa20.6■□□□□ 0.89
NDFIP1-201ENST00000253814 CHST3Q7LGC8 479 aa20.6■□□□□ 0.89
NDFIP1-201ENST00000253814 UBE3BQ7Z3V4 1068 aa20.6■□□□□ 0.89
NDFIP1-201ENST00000253814 FLT4P35916 1363 aa20.6■□□□□ 0.89
NDFIP1-201ENST00000253814 TERF1P54274 439 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 ADCK5Q3MIX3 580 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 VPS53Q5VIR6 699 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 RASSF8Q8NHQ8 419 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 HAND2P61296 217 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 CHMP4CQ96CF2 233 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 EFCAB6Q5THR3 1501 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 LRMPQ12912 555 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 CCDC171Q6TFL3 1326 aa20.59■□□□□ 0.89
NDFIP1-201ENST00000253814 CUL4AQ13619 759 aa20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 EDC3Q96F86 508 aaKnown RBP20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 CGNQ9P2M7 1197 aaKnown RBP20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 GOLIM4O00461 696 aa20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 LIG1P18858 919 aa20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 ME3Q16798 604 aa20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 SNRKQ9NRH2 765 aa20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 ARGLU1Q9NWB6 273 aaPredicted RBP20.58■□□□□ 0.89
NDFIP1-201ENST00000253814 LRRFIP1Q32MZ4 808 aaKnown RBP20.58■□□□□ 0.88
NDFIP1-201ENST00000253814 CEP135Q66GS9 1140 aa20.58■□□□□ 0.88
NDFIP1-201ENST00000253814 Q6ZUG5 572 aa20.58■□□□□ 0.88
NDFIP1-201ENST00000253814 TMX1Q9H3N1 280 aa20.58■□□□□ 0.88
NDFIP1-201ENST00000253814 RNF17Q9BXT8 1623 aaKnown RBP20.58■□□□□ 0.88
NDFIP1-201ENST00000253814 SKILP12757 684 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 TRERF1Q96PN7 1200 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 OSBPL3Q9H4L5 887 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 KIF24Q5T7B8 1368 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 KIAA0232Q92628 1395 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 OLFM4Q6UX06 510 aa20.57■□□□□ 0.88
NDFIP1-201ENST00000253814 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms