RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
CAPN7-201ENST00000253693 ZGPATQ8N5A5 531 aaKnown RBP18.3■□□□□ 0.52
CAPN7-201ENST00000253693 ANKRD26Q9UPS8 1709 aa18.3■□□□□ 0.52
CAPN7-201ENST00000253693 RNF214Q8ND24 703 aa18.3■□□□□ 0.52
CAPN7-201ENST00000253693 WASHC4Q2M389 1173 aa18.3■□□□□ 0.52
CAPN7-201ENST00000253693 BEND3Q5T5X7 828 aa18.3■□□□□ 0.52
CAPN7-201ENST00000253693 CCDC57Q2TAC2 916 aa18.29■□□□□ 0.52
CAPN7-201ENST00000253693 XRCC6P12956 609 aaKnown RBP eCLIP18.29■□□□□ 0.52
CAPN7-201ENST00000253693 HSPA2P54652 639 aa18.29■□□□□ 0.52
CAPN7-201ENST00000253693 DRC7Q8IY82 874 aa18.29■□□□□ 0.52
CAPN7-201ENST00000253693 JARID2Q92833 1246 aaPredicted RBP18.29■□□□□ 0.52
CAPN7-201ENST00000253693 PIP4K2AP48426 406 aaPredicted RBP18.28■□□□□ 0.52
CAPN7-201ENST00000253693 KRT32Q14532 448 aa18.28■□□□□ 0.52
CAPN7-201ENST00000253693 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
CAPN7-201ENST00000253693 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
CAPN7-201ENST00000253693 CCDC83Q8IWF9 413 aa18.28■□□□□ 0.52
CAPN7-201ENST00000253693 SLC52A2Q9HAB3 445 aa18.28■□□□□ 0.52
CAPN7-201ENST00000253693 SH2B1Q9NRF2 756 aaPredicted RBP18.28■□□□□ 0.52
CAPN7-201ENST00000253693 LARP1BQ659C4 914 aaKnown RBP18.28■□□□□ 0.52
CAPN7-201ENST00000253693 ZCRB1Q8TBF4 217 aaKnown RBP18.28■□□□□ 0.52
CAPN7-201ENST00000253693 BICC1Q9H694 974 aaKnown RBP18.27■□□□□ 0.52
CAPN7-201ENST00000253693 LARP6Q9BRS8 491 aaKnown RBP18.27■□□□□ 0.51
CAPN7-201ENST00000253693 TSPY26PQ9H489 355 aa18.27■□□□□ 0.51
CAPN7-201ENST00000253693 TMOD3Q9NYL9 352 aa18.27■□□□□ 0.51
CAPN7-201ENST00000253693 CD2BP2O95400 341 aaKnown RBP18.26■□□□□ 0.51
CAPN7-201ENST00000253693 STAP2Q9UGK3 403 aa18.26■□□□□ 0.51
CAPN7-201ENST00000253693 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
CAPN7-201ENST00000253693 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
CAPN7-201ENST00000253693 STK3Q13188 491 aa18.25■□□□□ 0.51
CAPN7-201ENST00000253693 ZBTB3Q9H5J0 574 aa18.25■□□□□ 0.51
CAPN7-201ENST00000253693 APPP05067 770 aa18.25■□□□□ 0.51
CAPN7-201ENST00000253693 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
CAPN7-201ENST00000253693 BICD2Q8TD16 824 aa18.25■□□□□ 0.51
CAPN7-201ENST00000253693 INTS4Q96HW7 963 aaKnown RBP18.25■□□□□ 0.51
CAPN7-201ENST00000253693 CWC25Q9NXE8 425 aaPredicted RBP18.25■□□□□ 0.51
CAPN7-201ENST00000253693 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
CAPN7-201ENST00000253693 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
CAPN7-201ENST00000253693 TRDNQ13061 729 aa18.24■□□□□ 0.51
CAPN7-201ENST00000253693 STARD3NLO95772 234 aa18.24■□□□□ 0.51
CAPN7-201ENST00000253693 SF3A1Q15459 793 aaKnown RBP18.24■□□□□ 0.51
CAPN7-201ENST00000253693 SYCE3A1L190 88 aa18.24■□□□□ 0.51
CAPN7-201ENST00000253693 SGSM2O43147 1006 aa18.23■□□□□ 0.51
CAPN7-201ENST00000253693 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
CAPN7-201ENST00000253693 CPLX1O14810 134 aa18.23■□□□□ 0.51
CAPN7-201ENST00000253693 GTF2E1P29083 439 aaPredicted RBP18.23■□□□□ 0.51
CAPN7-201ENST00000253693 UBR1Q8IWV7 1749 aa18.23■□□□□ 0.51
CAPN7-201ENST00000253693 RALYLQ86SE5 291 aaKnown RBP18.23■□□□□ 0.51
CAPN7-201ENST00000253693 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
CAPN7-201ENST00000253693 METTL22Q9BUU2 404 aaPredicted RBP18.23■□□□□ 0.51
CAPN7-201ENST00000253693 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
CAPN7-201ENST00000253693 GLIPR1L2Q4G1C9 344 aa18.23■□□□□ 0.51
CAPN7-201ENST00000253693 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
CAPN7-201ENST00000253693 TOMM22Q9NS69 142 aa18.23■□□□□ 0.51
CAPN7-201ENST00000253693 KRT85P78386 507 aa18.22■□□□□ 0.51
CAPN7-201ENST00000253693 PANK2Q9BZ23 570 aa18.22■□□□□ 0.51
CAPN7-201ENST00000253693 EPB41L2O43491 1005 aaKnown RBP18.22■□□□□ 0.51
CAPN7-201ENST00000253693 CNNM1Q9NRU3 951 aa18.22■□□□□ 0.51
CAPN7-201ENST00000253693 CCDC85AQ96PX6 553 aaPredicted RBP18.21■□□□□ 0.51
CAPN7-201ENST00000253693 RBM8AQ9Y5S9 174 aaKnown RBP18.21■□□□□ 0.51
CAPN7-201ENST00000253693 ESPNB1AK53 854 aa18.21■□□□□ 0.51
CAPN7-201ENST00000253693 STX6O43752 255 aa18.21■□□□□ 0.51
CAPN7-201ENST00000253693 PHKG2P15735 406 aa18.21■□□□□ 0.51
CAPN7-201ENST00000253693 PROSER3Q2NL68 480 aa18.21■□□□□ 0.51
CAPN7-201ENST00000253693 LMBR1LQ6UX01 489 aa18.21■□□□□ 0.51
CAPN7-201ENST00000253693 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
CAPN7-201ENST00000253693 SLIT1O75093 1534 aa18.21■□□□□ 0.51
CAPN7-201ENST00000253693 TMEM94Q12767 1356 aa18.21■□□□□ 0.5
CAPN7-201ENST00000253693 ERBB3P21860 1342 aa18.2■□□□□ 0.5
CAPN7-201ENST00000253693 ARHGAP23Q9P227 1491 aa18.2■□□□□ 0.5
CAPN7-201ENST00000253693 FOSBP53539 338 aa18.2■□□□□ 0.5
CAPN7-201ENST00000253693 GDPD2Q9HCC8 539 aa18.2■□□□□ 0.5
CAPN7-201ENST00000253693 RAD50Q92878 1312 aa18.2■□□□□ 0.5
CAPN7-201ENST00000253693 IFIT1P09914 478 aaKnown RBP18.2■□□□□ 0.5
CAPN7-201ENST00000253693 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
CAPN7-201ENST00000253693 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
CAPN7-201ENST00000253693 GCKRQ14397 625 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 ZSCAN23Q3MJ62 389 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 AXIN2Q9Y2T1 843 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 CHAF1AQ13111 956 aaPredicted RBP18.19■□□□□ 0.5
CAPN7-201ENST00000253693 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
CAPN7-201ENST00000253693 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 HSPA4P34932 840 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 AK2P54819 239 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 HMG20BQ9P0W2 317 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 ATP10DQ9P241 1426 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 IL2RBP14784 551 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 GJB2P29033 226 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 UNC5CLQ8IV45 518 aa18.19■□□□□ 0.5
CAPN7-201ENST00000253693 NRXN3Q9Y4C0 1643 aa18.18■□□□□ 0.5
CAPN7-201ENST00000253693 RBM27Q9P2N5 1060 aaKnown RBP18.18■□□□□ 0.5
CAPN7-201ENST00000253693 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
CAPN7-201ENST00000253693 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.18■□□□□ 0.57e-7■■■■□ 20
CAPN7-201ENST00000253693 CCDC39Q9UFE4 941 aa18.18■□□□□ 0.5
CAPN7-201ENST00000253693 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
CAPN7-201ENST00000253693 PALD1Q9ULE6 856 aa18.18■□□□□ 0.5
CAPN7-201ENST00000253693 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
CAPN7-201ENST00000253693 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
CAPN7-201ENST00000253693 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms