RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 CLEC4GQ6UXB4 293 aa27.65■■■□□ 2.02
HCFC1R1-201ENST00000248089 C2CD5Q86YS7 1000 aa27.65■■■□□ 2.02
HCFC1R1-201ENST00000248089 APAF1O14727 1248 aa27.64■■■□□ 2.02
HCFC1R1-201ENST00000248089 EIF2S2P20042 333 aaKnown RBP27.63■■■□□ 2.01
HCFC1R1-201ENST00000248089 ADCY9O60503 1353 aa27.62■■■□□ 2.01
HCFC1R1-201ENST00000248089 H0YIN7 160 aa27.62■■■□□ 2.01
HCFC1R1-201ENST00000248089 ST5P78524 1137 aa27.62■■■□□ 2.01
HCFC1R1-201ENST00000248089 KIF6Q6ZMV9 814 aa27.62■■■□□ 2.01
HCFC1R1-201ENST00000248089 NBPF5PQ86XG9 351 aaPredicted RBP27.62■■■□□ 2.01
HCFC1R1-201ENST00000248089 NIP7Q9Y221 180 aaKnown RBP eCLIP27.62■■■□□ 2.01
HCFC1R1-201ENST00000248089 CHL1O00533 1208 aa27.61■■■□□ 2.01
HCFC1R1-201ENST00000248089 HLFQ16534 295 aa27.61■■■□□ 2.01
HCFC1R1-201ENST00000248089 ERBB4Q15303 1308 aa27.61■■■□□ 2.01
HCFC1R1-201ENST00000248089 TTLL7Q6ZT98 887 aa27.6■■■□□ 2.01
HCFC1R1-201ENST00000248089 NECTIN2Q92692 538 aa27.6■■■□□ 2.01
HCFC1R1-201ENST00000248089 BRIP1Q9BX63 1249 aa27.6■■■□□ 2.01
HCFC1R1-201ENST00000248089 FAM177BA6PVY3 158 aa27.59■■■□□ 2.01
HCFC1R1-201ENST00000248089 PDE6BP35913 854 aa27.59■■■□□ 2.01
HCFC1R1-201ENST00000248089 KRT24Q2M2I5 525 aa27.59■■■□□ 2.01
HCFC1R1-201ENST00000248089 MRS2Q9HD23 443 aa27.59■■■□□ 2.01
HCFC1R1-201ENST00000248089 MAP3K15Q6ZN16 1313 aa27.59■■■□□ 2.01
HCFC1R1-201ENST00000248089 RGL2O15211 777 aa27.58■■■□□ 2.01
HCFC1R1-201ENST00000248089 ZNF526Q8TF50 670 aaPredicted RBP27.58■■■□□ 2.01
HCFC1R1-201ENST00000248089 ZBTB3Q9H5J0 574 aa27.58■■■□□ 2.01
HCFC1R1-201ENST00000248089 TTLL6Q8N841 843 aa27.57■■■□□ 2
HCFC1R1-201ENST00000248089 ZNF622Q969S3 477 aaKnown RBP eCLIP27.57■■■□□ 2
HCFC1R1-201ENST00000248089 SBF1O95248 1867 aa27.57■■■□□ 2
HCFC1R1-201ENST00000248089 ANXA1P04083 346 aa27.56■■■□□ 2
HCFC1R1-201ENST00000248089 ARFGEF2Q9Y6D5 1785 aa27.55■■■□□ 2
HCFC1R1-201ENST00000248089 ERVV-1B6SEH8 477 aa27.55■■■□□ 2
HCFC1R1-201ENST00000248089 PROSER3Q2NL68 480 aa27.55■■■□□ 2
HCFC1R1-201ENST00000248089 CFAP44Q96MT7 982 aa27.55■■■□□ 2
HCFC1R1-201ENST00000248089 PDZRN3Q9UPQ7 1066 aa27.55■■■□□ 2
HCFC1R1-201ENST00000248089 SENP3-EIF4A1A0A087X0R7 540 aa27.54■■■□□ 2
HCFC1R1-201ENST00000248089 ANKRD36CQ5JPF3 1778 aa27.54■■■□□ 2
HCFC1R1-201ENST00000248089 PDIA6Q15084 440 aa27.53■■■□□ 2
HCFC1R1-201ENST00000248089 TPTE2Q6XPS3 522 aa27.53■■■□□ 2
HCFC1R1-201ENST00000248089 GPBP1L1Q9HC44 474 aaPredicted RBP27.53■■■□□ 2
HCFC1R1-201ENST00000248089 MBIPQ9NS73 344 aa27.53■■■□□ 2
HCFC1R1-201ENST00000248089 CCDC88AQ3V6T2 1871 aa27.53■■■□□ 2
HCFC1R1-201ENST00000248089 TNRC6CQ9HCJ0 1690 aaKnown RBP27.52■■■□□ 2
HCFC1R1-201ENST00000248089 GPTP24298 496 aa27.52■■■□□ 2
HCFC1R1-201ENST00000248089 CALD1Q05682 793 aaKnown RBP27.52■■■□□ 2
HCFC1R1-201ENST00000248089 GTF2E1P29083 439 aaPredicted RBP27.51■■□□□ 1.99
HCFC1R1-201ENST00000248089 SLX4Q8IY92 1834 aa27.51■■□□□ 1.99
HCFC1R1-201ENST00000248089 RASSF7Q02833 373 aa27.5■■□□□ 1.99
HCFC1R1-201ENST00000248089 HDGFL1Q5TGJ6 251 aa27.5■■□□□ 1.99
HCFC1R1-201ENST00000248089 C9orf131Q5VYM1 1079 aa27.5■■□□□ 1.99
HCFC1R1-201ENST00000248089 LRP10Q7Z4F1 713 aa27.5■■□□□ 1.99
HCFC1R1-201ENST00000248089 IFT57Q9NWB7 429 aa27.5■■□□□ 1.99
HCFC1R1-201ENST00000248089 ZNF219Q9P2Y4 722 aaPredicted RBP27.5■■□□□ 1.99
HCFC1R1-201ENST00000248089 GNAI1P63096 354 aa27.49■■□□□ 1.99
HCFC1R1-201ENST00000248089 SRGNP10124 158 aa27.48■■□□□ 1.99
HCFC1R1-201ENST00000248089 AIMP1Q12904 312 aaKnown RBP27.48■■□□□ 1.99
HCFC1R1-201ENST00000248089 NYXQ9GZU5 481 aa27.48■■□□□ 1.99
HCFC1R1-201ENST00000248089 RNF181Q9P0P0 153 aa27.48■■□□□ 1.99
HCFC1R1-201ENST00000248089 CHPF2Q9P2E5 772 aa27.48■■□□□ 1.99
HCFC1R1-201ENST00000248089 UBN2Q6ZU65 1347 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 HOXB7P09629 217 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 ZNF853P0CG23 659 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 DUSP27Q5VZP5 1158 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 STYK1Q6J9G0 422 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 GIGYF2Q6Y7W6 1299 aaKnown RBP27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 XAGE3Q8WTP9 111 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 MASTLQ96GX5 879 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 DDX21Q9NR30 783 aaKnown RBP eCLIP27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 TIAM2Q8IVF5 1701 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 ABCC12Q96J65 1359 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 FER1L6Q2WGJ9 1857 aa27.47■■□□□ 1.99
HCFC1R1-201ENST00000248089 COPS6Q7L5N1 327 aa27.46■■□□□ 1.99
HCFC1R1-201ENST00000248089 NUTM1Q86Y26 1132 aa27.46■■□□□ 1.99
HCFC1R1-201ENST00000248089 CNKSR1Q969H4 720 aa27.46■■□□□ 1.99
HCFC1R1-201ENST00000248089 C21orf2O43822 256 aa27.45■■□□□ 1.98
HCFC1R1-201ENST00000248089 PRPF40BQ6NWY9 871 aaKnown RBP27.44■■□□□ 1.98
HCFC1R1-201ENST00000248089 ZNF34Q8IZ26 560 aa27.44■■□□□ 1.98
HCFC1R1-201ENST00000248089 ERFEQ4G0M1 354 aa27.43■■□□□ 1.98
HCFC1R1-201ENST00000248089 SUSD4Q5VX71 490 aa27.43■■□□□ 1.98
HCFC1R1-201ENST00000248089 IBTKQ9P2D0 1353 aaPredicted RBP27.43■■□□□ 1.98
HCFC1R1-201ENST00000248089 NPR1P16066 1061 aa27.42■■□□□ 1.98
HCFC1R1-201ENST00000248089 C1QTNF8P60827 252 aa27.42■■□□□ 1.98
HCFC1R1-201ENST00000248089 ELL2O00472 640 aaPredicted RBP27.41■■□□□ 1.98
HCFC1R1-201ENST00000248089 DBF4Q9UBU7 674 aaPredicted RBP27.41■■□□□ 1.98
HCFC1R1-201ENST00000248089 NFKBIEO00221 500 aa27.4■■□□□ 1.98
HCFC1R1-201ENST00000248089 PARP10Q53GL7 1025 aa27.4■■□□□ 1.98
HCFC1R1-201ENST00000248089 PPP1R42Q7Z4L9 355 aa27.4■■□□□ 1.98
HCFC1R1-201ENST00000248089 DICER1Q9UPY3 1922 aaKnown RBP27.39■■□□□ 1.98
HCFC1R1-201ENST00000248089 KLRG2A4D1S0 409 aaPredicted RBP27.39■■□□□ 1.98
HCFC1R1-201ENST00000248089 NTSR2O95665 410 aa27.39■■□□□ 1.98
HCFC1R1-201ENST00000248089 LMNB1P20700 586 aa27.39■■□□□ 1.98
HCFC1R1-201ENST00000248089 CCDC27Q2M243 656 aa27.38■■□□□ 1.97
HCFC1R1-201ENST00000248089 HSP90AB3PQ58FF7 597 aa27.38■■□□□ 1.97
HCFC1R1-201ENST00000248089 WWC1Q8IX03 1113 aa27.38■■□□□ 1.97
HCFC1R1-201ENST00000248089 TSR2Q969E8 191 aaKnown RBP27.38■■□□□ 1.97
HCFC1R1-201ENST00000248089 PRELPP51888 382 aa27.37■■□□□ 1.97
HCFC1R1-201ENST00000248089 RIC1Q4ADV7 1423 aa27.37■■□□□ 1.97
HCFC1R1-201ENST00000248089 FAM9BQ8IZU0 186 aa27.37■■□□□ 1.97
HCFC1R1-201ENST00000248089 C8orf58Q8NAV2 365 aa27.37■■□□□ 1.97
HCFC1R1-201ENST00000248089 SALL2Q9Y467 1007 aaPredicted RBP27.37■■□□□ 1.97
HCFC1R1-201ENST00000248089 LAMB2P55268 1798 aa27.37■■□□□ 1.97
HCFC1R1-201ENST00000248089 UTP14AQ9BVJ6 771 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms