RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 NAPBQ9H115 298 aa13.5□□□□□ -0.25
EFNB2-201ENST00000245323 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
EFNB2-201ENST00000245323 ZBTB40Q9NUA8 1239 aa13.5□□□□□ -0.25
EFNB2-201ENST00000245323 KIAA0232Q92628 1395 aa13.5□□□□□ -0.25
EFNB2-201ENST00000245323 USP5P45974 858 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
EFNB2-201ENST00000245323 CEP85Q6P2H3 762 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 RANBP6O60518 1105 aaKnown RBP13.49□□□□□ -0.25
EFNB2-201ENST00000245323 PDE1AP54750 535 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 BICC1Q9H694 974 aaKnown RBP13.49□□□□□ -0.25
EFNB2-201ENST00000245323 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 USP19O94966 1318 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 GDPD2Q9HCC8 539 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 USP21Q9UK80 565 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 SLC5A1P13866 664 aa13.49□□□□□ -0.25
EFNB2-201ENST00000245323 NSFL1CQ9UNZ2 370 aaKnown RBP13.49□□□□□ -0.25
EFNB2-201ENST00000245323 PREX2Q70Z35 1606 aa13.48□□□□□ -0.25
EFNB2-201ENST00000245323 CCDC69A6NI79 296 aa13.48□□□□□ -0.25
EFNB2-201ENST00000245323 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
EFNB2-201ENST00000245323 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
EFNB2-201ENST00000245323 ERVK-7P63135 1459 aa13.48□□□□□ -0.25
EFNB2-201ENST00000245323 IRS4O14654 1257 aaPredicted RBP13.48□□□□□ -0.25
EFNB2-201ENST00000245323 SLC3A2P08195 630 aaKnown RBP13.48□□□□□ -0.25
EFNB2-201ENST00000245323 ZSCAN25Q6NSZ9 544 aa13.48□□□□□ -0.25
EFNB2-201ENST00000245323 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
EFNB2-201ENST00000245323 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
EFNB2-201ENST00000245323 MRE11P49959 708 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 NLRP3Q96P20 1036 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 CWC22Q9HCG8 908 aaKnown RBP13.47□□□□□ -0.25
EFNB2-201ENST00000245323 RTCBQ9Y3I0 505 aaKnown RBP13.47□□□□□ -0.25
EFNB2-201ENST00000245323 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
EFNB2-201ENST00000245323 SSFA2P28290 1259 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 NUCB1Q02818 461 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 MAP3K12Q12852 859 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
EFNB2-201ENST00000245323 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 IMMTQ16891 758 aaKnown RBP13.47□□□□□ -0.25
EFNB2-201ENST00000245323 CDC42BPAQ5VT25 1732 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 MCM2P49736 904 aa13.47□□□□□ -0.25
EFNB2-201ENST00000245323 ZFYVE9O95405 1425 aa13.46□□□□□ -0.25
EFNB2-201ENST00000245323 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.25
EFNB2-201ENST00000245323 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
EFNB2-201ENST00000245323 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
EFNB2-201ENST00000245323 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
EFNB2-201ENST00000245323 STK38Q15208 465 aa13.46□□□□□ -0.25
EFNB2-201ENST00000245323 SPC24Q8NBT2 197 aa13.46□□□□□ -0.26
EFNB2-201ENST00000245323 MKNK2Q9HBH9 465 aa13.46□□□□□ -0.26
EFNB2-201ENST00000245323 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
EFNB2-201ENST00000245323 TFCP2Q12800 502 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 NOC3LQ8WTT2 800 aaKnown RBP13.45□□□□□ -0.26
EFNB2-201ENST00000245323 ME1P48163 572 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 ARHGEF25Q86VW2 580 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 CTNNA3Q9UI47 895 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
EFNB2-201ENST00000245323 BMP2KLQ5H9B9 411 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
EFNB2-201ENST00000245323 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
EFNB2-201ENST00000245323 PDCP20941 246 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 TTLL7Q6ZT98 887 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 CHST3Q7LGC8 479 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 SMARCC1Q92922 1105 aaPredicted RBP13.44□□□□□ -0.26
EFNB2-201ENST00000245323 FAM13BQ9NYF5 915 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
EFNB2-201ENST00000245323 RIMBP2O15034 1052 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 XBP1P17861 261 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 PROSER3Q2NL68 480 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 C8orf34Q49A92 452 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 CCDC152Q4G0S7 254 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
EFNB2-201ENST00000245323 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
EFNB2-201ENST00000245323 ZNF213O14771 459 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 NECAB1Q8N987 351 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 UTP14AQ9BVJ6 771 aaKnown RBP13.43□□□□□ -0.26
EFNB2-201ENST00000245323 TRIM5Q9C035 493 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 NPC1L1Q9UHC9 1359 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
EFNB2-201ENST00000245323 MIGA1Q8NAN2 632 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 CCDC43Q96MW1 224 aaKnown RBP13.43□□□□□ -0.26
EFNB2-201ENST00000245323 AXIN2Q9Y2T1 843 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 ABCC3O15438 1527 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
EFNB2-201ENST00000245323 TAF5LO75529 589 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 PHKG2P15735 406 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 TBC1D32Q96NH3 1257 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 BRMS1Q9HCU9 246 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 KDM5DQ9BY66 1539 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 KINO60870 393 aaKnown RBP13.42□□□□□ -0.26
EFNB2-201ENST00000245323 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
EFNB2-201ENST00000245323 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms