RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 BICC1Q9H694 974 aaKnown RBP20.34■□□□□ 0.85
SSPN-201ENST00000242729 RAD50Q92878 1312 aa20.33■□□□□ 0.85
SSPN-201ENST00000242729 LRRC37A3O60309 1634 aa20.33■□□□□ 0.85
SSPN-201ENST00000242729 MCM2P49736 904 aa20.33■□□□□ 0.85
SSPN-201ENST00000242729 NECAB1Q8N987 351 aa20.33■□□□□ 0.85
SSPN-201ENST00000242729 NLRP2Q9NX02 1062 aa20.33■□□□□ 0.85
SSPN-201ENST00000242729 LTN1O94822 1766 aa20.33■□□□□ 0.85
SSPN-201ENST00000242729 KCNJ4P48050 445 aa20.33■□□□□ 0.84
SSPN-201ENST00000242729 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.84
SSPN-201ENST00000242729 FIBPO43427 364 aa20.32■□□□□ 0.84
SSPN-201ENST00000242729 CHGBP05060 677 aa20.32■□□□□ 0.84
SSPN-201ENST00000242729 PPP1R9BQ96SB3 815 aa20.32■□□□□ 0.84
SSPN-201ENST00000242729 FER1L4A9Z1Z3 1794 aa20.32■□□□□ 0.84
SSPN-201ENST00000242729 KCNH5Q8NCM2 988 aa20.32■□□□□ 0.84
SSPN-201ENST00000242729 LRSAM1Q6UWE0 723 aa20.31■□□□□ 0.84
SSPN-201ENST00000242729 ARHGEF25Q86VW2 580 aa20.31■□□□□ 0.84
SSPN-201ENST00000242729 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
SSPN-201ENST00000242729 CHMP3Q9Y3E7 222 aa20.31■□□□□ 0.84
SSPN-201ENST00000242729 MSNP26038 577 aaKnown RBP20.31■□□□□ 0.84
SSPN-201ENST00000242729 RIC3Q7Z5B4 369 aa20.31■□□□□ 0.84
SSPN-201ENST00000242729 KSR2Q6VAB6 950 aa20.3■□□□□ 0.84
SSPN-201ENST00000242729 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
SSPN-201ENST00000242729 EAF2Q96CJ1 260 aaPredicted RBP20.3■□□□□ 0.84
SSPN-201ENST00000242729 KAZALD1Q96I82 304 aa20.3■□□□□ 0.84
SSPN-201ENST00000242729 TAF6LQ9Y6J9 622 aa20.3■□□□□ 0.84
SSPN-201ENST00000242729 ECHDC1Q9NTX5 307 aa20.3■□□□□ 0.84
SSPN-201ENST00000242729 GLRX3O76003 335 aaKnown RBP20.29■□□□□ 0.84
SSPN-201ENST00000242729 SASH1O94885 1247 aa20.29■□□□□ 0.84
SSPN-201ENST00000242729 SYT1P21579 422 aa20.29■□□□□ 0.84
SSPN-201ENST00000242729 CHRNA2Q15822 529 aa20.29■□□□□ 0.84
SSPN-201ENST00000242729 ZSCAN30Q86W11 494 aa20.29■□□□□ 0.84
SSPN-201ENST00000242729 KRT28Q7Z3Y7 464 aa20.28■□□□□ 0.84
SSPN-201ENST00000242729 INTS4Q96HW7 963 aaKnown RBP20.28■□□□□ 0.84
SSPN-201ENST00000242729 RPAP1Q9BWH6 1393 aaPredicted RBP20.28■□□□□ 0.84
SSPN-201ENST00000242729 VPS37CA5D8V6 355 aaPredicted RBP20.28■□□□□ 0.84
SSPN-201ENST00000242729 GRM8O00222 908 aa20.28■□□□□ 0.84
SSPN-201ENST00000242729 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
SSPN-201ENST00000242729 SMC3Q9UQE7 1217 aa20.28■□□□□ 0.84
SSPN-201ENST00000242729 PLCB2Q00722 1185 aa20.27■□□□□ 0.84
SSPN-201ENST00000242729 FAM173BQ6P4H8 233 aa20.27■□□□□ 0.84
SSPN-201ENST00000242729 FERMT3Q86UX7 667 aa20.27■□□□□ 0.84
SSPN-201ENST00000242729 TTC14Q96N46 770 aa20.27■□□□□ 0.84
SSPN-201ENST00000242729 MYD88Q99836 296 aa20.27■□□□□ 0.84
SSPN-201ENST00000242729 AOX1Q06278 1338 aa20.27■□□□□ 0.84
SSPN-201ENST00000242729 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.83
SSPN-201ENST00000242729 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.83
SSPN-201ENST00000242729 G3BP1Q13283 466 aaKnown RBP eCLIP20.27■□□□□ 0.83
SSPN-201ENST00000242729 NMIQ13287 307 aaPredicted RBP20.27■□□□□ 0.83
SSPN-201ENST00000242729 LIMCH1Q9UPQ0 1083 aa20.27■□□□□ 0.83
SSPN-201ENST00000242729 WDR33Q9C0J8 1336 aaKnown RBP20.26■□□□□ 0.83
SSPN-201ENST00000242729 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 PDRG1Q9NUG6 133 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 NFAT5O94916 1531 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 PXDNLA1KZ92 1463 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 IGKV5-2P06315 115 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 STK3Q13188 491 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 HSP90AB4PQ58FF6 505 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 COPS6Q7L5N1 327 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 TCHHQ07283 1943 aa20.26■□□□□ 0.83
SSPN-201ENST00000242729 GJB2P29033 226 aa20.25■□□□□ 0.83
SSPN-201ENST00000242729 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
SSPN-201ENST00000242729 A0A0D9SFI3 127 aa20.25■□□□□ 0.83
SSPN-201ENST00000242729 STX6O43752 255 aa20.25■□□□□ 0.83
SSPN-201ENST00000242729 MBD3O95983 291 aa20.25■□□□□ 0.83
SSPN-201ENST00000242729 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
SSPN-201ENST00000242729 TUBGCP6Q96RT7 1819 aa20.25■□□□□ 0.83
SSPN-201ENST00000242729 PDIA6Q15084 440 aa20.24■□□□□ 0.83
SSPN-201ENST00000242729 FSD1Q9BTV5 496 aa20.24■□□□□ 0.83
SSPN-201ENST00000242729 RBM8AQ9Y5S9 174 aaKnown RBP20.24■□□□□ 0.83
SSPN-201ENST00000242729 HOXB7P09629 217 aa20.24■□□□□ 0.83
SSPN-201ENST00000242729 DNM1Q05193 864 aaKnown RBP20.24■□□□□ 0.83
SSPN-201ENST00000242729 ZNF830Q96NB3 372 aaPredicted RBP20.24■□□□□ 0.83
SSPN-201ENST00000242729 TSPY26PQ9H489 355 aa20.24■□□□□ 0.83
SSPN-201ENST00000242729 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
SSPN-201ENST00000242729 PPFIA3O75145 1194 aa20.23■□□□□ 0.83
SSPN-201ENST00000242729 PTMAP06454 111 aaKnown RBP20.23■□□□□ 0.83
SSPN-201ENST00000242729 ZSCAN22P10073 491 aaPredicted RBP20.23■□□□□ 0.83
SSPN-201ENST00000242729 RAPGEF4Q8WZA2 1011 aa20.23■□□□□ 0.83
SSPN-201ENST00000242729 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
SSPN-201ENST00000242729 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.23■□□□□ 0.83
SSPN-201ENST00000242729 ME3Q16798 604 aa20.23■□□□□ 0.83
SSPN-201ENST00000242729 SLFNL1Q499Z3 407 aa20.23■□□□□ 0.83
SSPN-201ENST00000242729 ZNF790Q6PG37 636 aa20.23■□□□□ 0.83
SSPN-201ENST00000242729 LINS1Q8NG48 757 aa20.22■□□□□ 0.83
SSPN-201ENST00000242729 GPATCH3Q96I76 525 aa20.22■□□□□ 0.83
SSPN-201ENST00000242729 ZNF589Q86UQ0 364 aaPredicted RBP20.22■□□□□ 0.83
SSPN-201ENST00000242729 TTC41PQ6P2S7 1318 aa20.21■□□□□ 0.83
SSPN-201ENST00000242729 R3HCC1Q9Y3T6 440 aaKnown RBP20.21■□□□□ 0.83
SSPN-201ENST00000242729 CYP46A1Q9Y6A2 500 aa20.21■□□□□ 0.83
SSPN-201ENST00000242729 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
SSPN-201ENST00000242729 ST3GAL1Q11201 340 aa20.21■□□□□ 0.83
SSPN-201ENST00000242729 RUFY2Q8WXA3 655 aa20.21■□□□□ 0.83
SSPN-201ENST00000242729 DDX21Q9NR30 783 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSPN-201ENST00000242729 TPCN1Q9ULQ1 816 aa20.21■□□□□ 0.83
SSPN-201ENST00000242729 ALDH1L1O75891 902 aa20.2■□□□□ 0.82
SSPN-201ENST00000242729 CREB3L3Q68CJ9 461 aa20.2■□□□□ 0.82
SSPN-201ENST00000242729 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
SSPN-201ENST00000242729 CCDC129Q6ZRS4 1044 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms