RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 GIGYF1O75420 1035 aaPredicted RBP16.85■□□□□ 0.29
PDZD11-201ENST00000239666 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
PDZD11-201ENST00000239666 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
PDZD11-201ENST00000239666 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
PDZD11-201ENST00000239666 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
PDZD11-201ENST00000239666 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
PDZD11-201ENST00000239666 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
PDZD11-201ENST00000239666 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
PDZD11-201ENST00000239666 ZBTB1Q9Y2K1 713 aa16.84■□□□□ 0.29
PDZD11-201ENST00000239666 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
PDZD11-201ENST00000239666 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
PDZD11-201ENST00000239666 SRP68Q9UHB9 627 aaKnown RBP16.83■□□□□ 0.28
PDZD11-201ENST00000239666 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
PDZD11-201ENST00000239666 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
PDZD11-201ENST00000239666 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
PDZD11-201ENST00000239666 POLRMTO00411 1230 aaKnown RBP16.82■□□□□ 0.28
PDZD11-201ENST00000239666 DALRD3Q5D0E6 543 aaKnown RBP16.82■□□□□ 0.28
PDZD11-201ENST00000239666 GPBP1L1Q9HC44 474 aaPredicted RBP16.82■□□□□ 0.28
PDZD11-201ENST00000239666 DPEP1P16444 411 aa16.81■□□□□ 0.28
PDZD11-201ENST00000239666 C1QTNF8P60827 252 aa16.81■□□□□ 0.28
PDZD11-201ENST00000239666 ZNF652Q9Y2D9 606 aa16.81■□□□□ 0.28
PDZD11-201ENST00000239666 CLEC4GQ6UXB4 293 aa16.8■□□□□ 0.28
PDZD11-201ENST00000239666 SERPINB2P05120 415 aa16.79■□□□□ 0.28
PDZD11-201ENST00000239666 LMOD3Q0VAK6 560 aa16.79■□□□□ 0.28
PDZD11-201ENST00000239666 NFIXQ14938 502 aa16.79■□□□□ 0.28
PDZD11-201ENST00000239666 ARHGAP27Q6ZUM4 889 aa16.79■□□□□ 0.28
PDZD11-201ENST00000239666 H0YIN7 160 aa16.78■□□□□ 0.28
PDZD11-201ENST00000239666 NPHP1O15259 732 aa16.78■□□□□ 0.28
PDZD11-201ENST00000239666 GALR2O43603 387 aaPredicted RBP16.78■□□□□ 0.28
PDZD11-201ENST00000239666 PDE6BP35913 854 aa16.78■□□□□ 0.28
PDZD11-201ENST00000239666 DDR1Q08345 913 aa16.78■□□□□ 0.28
PDZD11-201ENST00000239666 MCM10Q7L590 875 aa16.78■□□□□ 0.28
PDZD11-201ENST00000239666 SETDB2Q96T68 719 aa16.78■□□□□ 0.28
PDZD11-201ENST00000239666 N4BP2Q86UW6 1770 aaPredicted RBP16.78■□□□□ 0.28
PDZD11-201ENST00000239666 NFE2L2Q16236 605 aa16.77■□□□□ 0.28
PDZD11-201ENST00000239666 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
PDZD11-201ENST00000239666 ZNF330Q9Y3S2 320 aaPredicted RBP16.77■□□□□ 0.28
PDZD11-201ENST00000239666 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.27
PDZD11-201ENST00000239666 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
PDZD11-201ENST00000239666 KCNA3P22001 575 aa16.76■□□□□ 0.27
PDZD11-201ENST00000239666 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
PDZD11-201ENST00000239666 ATP10DQ9P241 1426 aa16.76■□□□□ 0.27
PDZD11-201ENST00000239666 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
PDZD11-201ENST00000239666 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
PDZD11-201ENST00000239666 PLEKHF1Q96S99 279 aa16.75■□□□□ 0.27
PDZD11-201ENST00000239666 BRIP1Q9BX63 1249 aa16.75■□□□□ 0.27
PDZD11-201ENST00000239666 BRCA1P38398 1863 aaKnown RBP16.75■□□□□ 0.27
PDZD11-201ENST00000239666 ADCY9O60503 1353 aa16.75■□□□□ 0.27
PDZD11-201ENST00000239666 KIAA1551Q9HCM1 1747 aa16.74■□□□□ 0.27
PDZD11-201ENST00000239666 A1BGP04217 495 aa16.74■□□□□ 0.27
PDZD11-201ENST00000239666 ST5P78524 1137 aa16.74■□□□□ 0.27
PDZD11-201ENST00000239666 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
PDZD11-201ENST00000239666 TTLL6Q8N841 843 aa16.74■□□□□ 0.27
PDZD11-201ENST00000239666 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
PDZD11-201ENST00000239666 TBC1D2BQ9UPU7 963 aa16.74■□□□□ 0.27
PDZD11-201ENST00000239666 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
PDZD11-201ENST00000239666 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
PDZD11-201ENST00000239666 ZC3H4Q9UPT8 1303 aaKnown RBP16.73■□□□□ 0.27
PDZD11-201ENST00000239666 TMEM106CQ9BVX2 250 aa16.73■□□□□ 0.27
PDZD11-201ENST00000239666 WWC3Q9ULE0 1092 aa16.73■□□□□ 0.27
PDZD11-201ENST00000239666 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
PDZD11-201ENST00000239666 AFDNP55196 1824 aaKnown RBP16.73■□□□□ 0.27
PDZD11-201ENST00000239666 WDR43Q15061 677 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDZD11-201ENST00000239666 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
PDZD11-201ENST00000239666 DLG5Q8TDM6 1919 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 KCNQ3O43525 872 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 GABBR2O75899 941 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 SOGA3Q5TF21 947 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 TBC1D9BQ66K14 1250 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 CNBD1Q8NA66 436 aa16.71■□□□□ 0.27
PDZD11-201ENST00000239666 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
PDZD11-201ENST00000239666 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
PDZD11-201ENST00000239666 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
PDZD11-201ENST00000239666 CHRNA5P30532 468 aa16.7■□□□□ 0.26
PDZD11-201ENST00000239666 RIPK4P57078 832 aa16.7■□□□□ 0.26
PDZD11-201ENST00000239666 CNKSR1Q969H4 720 aa16.7■□□□□ 0.26
PDZD11-201ENST00000239666 SCN7AQ01118 1682 aa16.69■□□□□ 0.26
PDZD11-201ENST00000239666 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
PDZD11-201ENST00000239666 ERVV-1B6SEH8 477 aa16.69■□□□□ 0.26
PDZD11-201ENST00000239666 TIE1P35590 1138 aa16.69■□□□□ 0.26
PDZD11-201ENST00000239666 PLCB2Q00722 1185 aa16.69■□□□□ 0.26
PDZD11-201ENST00000239666 EIF4A1P60842 406 aaKnown RBP16.68■□□□□ 0.26
PDZD11-201ENST00000239666 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
PDZD11-201ENST00000239666 NYXQ9GZU5 481 aa16.68■□□□□ 0.26
PDZD11-201ENST00000239666 LMNB1P20700 586 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 GTF2E1P29083 439 aaPredicted RBP16.67■□□□□ 0.26
PDZD11-201ENST00000239666 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 PRR5LQ6MZQ0 368 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 PAXIP1Q6ZW49 1069 aaPredicted RBP16.67■□□□□ 0.26
PDZD11-201ENST00000239666 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 TSPYL4Q9UJ04 414 aa16.67■□□□□ 0.26
PDZD11-201ENST00000239666 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
PDZD11-201ENST00000239666 TOMM70O94826 608 aa16.66■□□□□ 0.26
PDZD11-201ENST00000239666 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms