RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 KRT222Q8N1A0 295 aa12.91□□□□□ -0.34
CCDC170-201ENST00000239374 NOC3LQ8WTT2 800 aaKnown RBP12.91□□□□□ -0.34
CCDC170-201ENST00000239374 IBTKQ9P2D0 1353 aaPredicted RBP12.91□□□□□ -0.34
CCDC170-201ENST00000239374 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC170-201ENST00000239374 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.34
CCDC170-201ENST00000239374 SIRT2Q8IXJ6 389 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 AK7Q96M32 723 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 FAM173BQ6P4H8 233 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 PCMTD1Q96MG8 357 aaPredicted RBP12.9□□□□□ -0.34
CCDC170-201ENST00000239374 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 ATP10AO60312 1499 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 PIK3R4Q99570 1358 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 CBFA2T2O43439 604 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.34
CCDC170-201ENST00000239374 LEKR1Q6ZMV7 388 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 CAVIN2O95810 425 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 SKIDA1Q1XH10 827 aa12.9□□□□□ -0.34
CCDC170-201ENST00000239374 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
CCDC170-201ENST00000239374 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.35
CCDC170-201ENST00000239374 NCKAP5LQ9HCH0 1330 aa12.89□□□□□ -0.35
CCDC170-201ENST00000239374 GSDMDP57764 484 aa12.89□□□□□ -0.35
CCDC170-201ENST00000239374 FKBP4Q02790 459 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC170-201ENST00000239374 ACEP12821 1306 aa12.89□□□□□ -0.35
CCDC170-201ENST00000239374 PNMA6EA0A0J9YXQ4 647 aa12.89□□□□□ -0.35
CCDC170-201ENST00000239374 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
CCDC170-201ENST00000239374 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
CCDC170-201ENST00000239374 CCDC171Q6TFL3 1326 aa12.89□□□□□ -0.35
CCDC170-201ENST00000239374 LRRC2Q9BYS8 371 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
CCDC170-201ENST00000239374 CHL1O00533 1208 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 NEK1Q96PY6 1258 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 BCL2L12Q9HB09 334 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 SNX14Q9Y5W7 946 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 ERICH2A1L162 156 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 GTF2F1P35269 517 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC170-201ENST00000239374 BRF1Q92994 677 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 MPRIPQ6WCQ1 1025 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
CCDC170-201ENST00000239374 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
CCDC170-201ENST00000239374 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
CCDC170-201ENST00000239374 POLR1AO95602 1720 aaPredicted RBP12.87□□□□□ -0.35
CCDC170-201ENST00000239374 LRRIQ1Q96JM4 1722 aa12.87□□□□□ -0.35
CCDC170-201ENST00000239374 SAMD9LQ8IVG5 1584 aa12.87□□□□□ -0.35
CCDC170-201ENST00000239374 ISM2Q6H9L7 571 aa12.87□□□□□ -0.35
CCDC170-201ENST00000239374 BMS1Q14692 1282 aaKnown RBP12.87□□□□□ -0.35
CCDC170-201ENST00000239374 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
CCDC170-201ENST00000239374 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
CCDC170-201ENST00000239374 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
CCDC170-201ENST00000239374 FEZ1Q99689 392 aa12.87□□□□□ -0.35
CCDC170-201ENST00000239374 NOL10Q9BSC4 688 aaKnown RBP12.87□□□□□ -0.35
CCDC170-201ENST00000239374 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 C8orf76Q96K31 380 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 CHPF2Q9P2E5 772 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
CCDC170-201ENST00000239374 RTL1A6NKG5 1358 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
CCDC170-201ENST00000239374 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 ZSCAN16Q9H4T2 348 aaPredicted RBP12.86□□□□□ -0.35
CCDC170-201ENST00000239374 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 ABCC1P33527 1531 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 SGSM2O43147 1006 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
CCDC170-201ENST00000239374 CCDC158Q5M9N0 1113 aa12.86□□□□□ -0.35
CCDC170-201ENST00000239374 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 NPATQ14207 1427 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 POLR3DP05423 398 aaPredicted RBP12.85□□□□□ -0.35
CCDC170-201ENST00000239374 SETQ01105 290 aaPredicted RBP12.85□□□□□ -0.35
CCDC170-201ENST00000239374 NMIQ13287 307 aaPredicted RBP12.85□□□□□ -0.35
CCDC170-201ENST00000239374 RRP12Q5JTH9 1297 aaKnown RBP12.85□□□□□ -0.35
CCDC170-201ENST00000239374 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 TTC37Q6PGP7 1564 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 ZSCAN12O43309 604 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 HSPA4P34932 840 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 AOPEPQ8N6M6 819 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
CCDC170-201ENST00000239374 HMG20BQ9P0W2 317 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 KIF2CQ99661 725 aa12.85□□□□□ -0.35
CCDC170-201ENST00000239374 PHAXQ9H814 394 aaKnown RBP12.85□□□□□ -0.35
CCDC170-201ENST00000239374 CFAP65Q6ZU64 1925 aaKnown RBP12.85□□□□□ -0.35
CCDC170-201ENST00000239374 SLU7O95391 586 aaKnown RBP12.84□□□□□ -0.35
CCDC170-201ENST00000239374 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
CCDC170-201ENST00000239374 RAD50Q92878 1312 aa12.84□□□□□ -0.35
CCDC170-201ENST00000239374 ERLIN1O75477 346 aa12.84□□□□□ -0.35
CCDC170-201ENST00000239374 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
CCDC170-201ENST00000239374 LARP1Q6PKG0 1096 aaKnown RBP12.84□□□□□ -0.35
CCDC170-201ENST00000239374 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
CCDC170-201ENST00000239374 CTNNA3Q9UI47 895 aa12.84□□□□□ -0.35
CCDC170-201ENST00000239374 MYD88Q99836 296 aa12.84□□□□□ -0.35
CCDC170-201ENST00000239374 ZNF397Q8NF99 534 aaPredicted RBP12.84□□□□□ -0.35
CCDC170-201ENST00000239374 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
CCDC170-201ENST00000239374 KIF20AO95235 890 aa12.83□□□□□ -0.35
CCDC170-201ENST00000239374 TIGD1Q96MW7 591 aa12.83□□□□□ -0.35
CCDC170-201ENST00000239374 CBX8Q9HC52 389 aa12.83□□□□□ -0.35
CCDC170-201ENST00000239374 RUFY1Q96T51 708 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms