RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 BRIP1Q9BX63 1249 aa11.45□□□□□ -0.58
IFT43-201ENST00000238628 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
IFT43-201ENST00000238628 LMOD1P29536 600 aaPredicted RBP11.44□□□□□ -0.58
IFT43-201ENST00000238628 FXR1P51114 621 aaKnown RBP eCLIP11.44□□□□□ -0.58
IFT43-201ENST00000238628 SAPCD2Q86UD0 394 aa11.44□□□□□ -0.58
IFT43-201ENST00000238628 CCDC24Q8N4L8 307 aa11.44□□□□□ -0.58
IFT43-201ENST00000238628 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
IFT43-201ENST00000238628 SOS1Q07889 1333 aaPredicted RBP11.43□□□□□ -0.58
IFT43-201ENST00000238628 MTHFSP49914 203 aa11.43□□□□□ -0.58
IFT43-201ENST00000238628 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
IFT43-201ENST00000238628 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
IFT43-201ENST00000238628 ZNF530Q6P9A1 599 aaPredicted RBP11.43□□□□□ -0.58
IFT43-201ENST00000238628 GPC2Q8N158 579 aa11.43□□□□□ -0.58
IFT43-201ENST00000238628 BCL2L12Q9HB09 334 aa11.43□□□□□ -0.58
IFT43-201ENST00000238628 ZNF277Q9NRM2 450 aaPredicted RBP11.43□□□□□ -0.58
IFT43-201ENST00000238628 TRPM7Q96QT4 1865 aa11.42□□□□□ -0.58
IFT43-201ENST00000238628 CELF2O95319 508 aaKnown RBP11.42□□□□□ -0.58
IFT43-201ENST00000238628 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
IFT43-201ENST00000238628 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
IFT43-201ENST00000238628 HHIPL1Q96JK4 782 aa11.42□□□□□ -0.58
IFT43-201ENST00000238628 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
IFT43-201ENST00000238628 FZD9O00144 591 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 NPHP1O15259 732 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 FKBP4Q02790 459 aaKnown RBP eCLIP11.41□□□□□ -0.58
IFT43-201ENST00000238628 NOGQ13253 232 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 STYK1Q6J9G0 422 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
IFT43-201ENST00000238628 DNAJC10Q8IXB1 793 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 SLC17A8Q8NDX2 589 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 SLX4Q8IY92 1834 aa11.41□□□□□ -0.58
IFT43-201ENST00000238628 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
IFT43-201ENST00000238628 MASTLQ96GX5 879 aa11.4□□□□□ -0.58
IFT43-201ENST00000238628 ZIC5Q96T25 663 aa11.4□□□□□ -0.58
IFT43-201ENST00000238628 ZNF408Q9H9D4 720 aa11.4□□□□□ -0.58
IFT43-201ENST00000238628 COL15A1P39059 1388 aa11.4□□□□□ -0.59
IFT43-201ENST00000238628 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.59
IFT43-201ENST00000238628 EPS15P42566 896 aa11.39□□□□□ -0.59
IFT43-201ENST00000238628 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
IFT43-201ENST00000238628 USP50Q70EL3 339 aaPredicted RBP11.39□□□□□ -0.59
IFT43-201ENST00000238628 SAGE1Q9NXZ1 904 aa11.39□□□□□ -0.59
IFT43-201ENST00000238628 TRPA1O75762 1119 aa11.38□□□□□ -0.59
IFT43-201ENST00000238628 SRGNP10124 158 aa11.38□□□□□ -0.59
IFT43-201ENST00000238628 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
IFT43-201ENST00000238628 EIF6P56537 245 aaKnown RBP11.38□□□□□ -0.59
IFT43-201ENST00000238628 TBC1D9BQ66K14 1250 aa11.38□□□□□ -0.59
IFT43-201ENST00000238628 JDP2Q8WYK2 163 aa11.38□□□□□ -0.59
IFT43-201ENST00000238628 ANKRD31Q8N7Z5 1873 aa11.38□□□□□ -0.59
IFT43-201ENST00000238628 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
IFT43-201ENST00000238628 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
IFT43-201ENST00000238628 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
IFT43-201ENST00000238628 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
IFT43-201ENST00000238628 RTKN2Q8IZC4 609 aa11.37□□□□□ -0.59
IFT43-201ENST00000238628 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
IFT43-201ENST00000238628 PANK3Q9H999 370 aa11.37□□□□□ -0.59
IFT43-201ENST00000238628 ZBTB1Q9Y2K1 713 aa11.37□□□□□ -0.59
IFT43-201ENST00000238628 CACNA1SQ13698 1873 aa11.37□□□□□ -0.59
IFT43-201ENST00000238628 COL11A2P13942 1736 aaPredicted RBP11.36□□□□□ -0.59
IFT43-201ENST00000238628 TJP1Q07157 1748 aa11.36□□□□□ -0.59
IFT43-201ENST00000238628 ST5P78524 1137 aa11.36□□□□□ -0.59
IFT43-201ENST00000238628 PKN2Q16513 984 aaKnown RBP11.36□□□□□ -0.59
IFT43-201ENST00000238628 MORC1Q86VD1 984 aa11.36□□□□□ -0.59
IFT43-201ENST00000238628 SYNE4Q8N205 404 aa11.36□□□□□ -0.59
IFT43-201ENST00000238628 RNF186Q9NXI6 227 aa11.36□□□□□ -0.59
IFT43-201ENST00000238628 TIMELESSQ9UNS1 1208 aa11.36□□□□□ -0.59
IFT43-201ENST00000238628 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
IFT43-201ENST00000238628 CANXP27824 592 aaKnown RBP11.35□□□□□ -0.59
IFT43-201ENST00000238628 SCNN1DP51172 638 aa11.35□□□□□ -0.59
IFT43-201ENST00000238628 CNBD1Q8NA66 436 aa11.35□□□□□ -0.59
IFT43-201ENST00000238628 GLIS2Q9BZE0 524 aaPredicted RBP11.35□□□□□ -0.59
IFT43-201ENST00000238628 HUNKP57058 714 aa11.34□□□□□ -0.59
IFT43-201ENST00000238628 KIF23Q02241 960 aaPredicted RBP11.34□□□□□ -0.59
IFT43-201ENST00000238628 OLFM4Q6UX06 510 aa11.34□□□□□ -0.59
IFT43-201ENST00000238628 LGR6Q9HBX8 967 aa11.34□□□□□ -0.59
IFT43-201ENST00000238628 HDAC9Q9UKV0 1011 aa11.34□□□□□ -0.59
IFT43-201ENST00000238628 A0A087WZG4 1122 aa11.33□□□□□ -0.6
IFT43-201ENST00000238628 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.6
IFT43-201ENST00000238628 IL13P35225 146 aa11.33□□□□□ -0.6
IFT43-201ENST00000238628 SLC39A6Q13433 755 aa11.33□□□□□ -0.6
IFT43-201ENST00000238628 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
IFT43-201ENST00000238628 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
IFT43-201ENST00000238628 RGMBQ6NW40 437 aa11.32□□□□□ -0.6
IFT43-201ENST00000238628 ADARB2Q9NS39 739 aaKnown RBP11.32□□□□□ -0.6
IFT43-201ENST00000238628 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
IFT43-201ENST00000238628 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
IFT43-201ENST00000238628 NPR1P16066 1061 aa11.31□□□□□ -0.6
IFT43-201ENST00000238628 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
IFT43-201ENST00000238628 TRIM26Q12899 539 aaPredicted RBP11.31□□□□□ -0.6
IFT43-201ENST00000238628 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
IFT43-201ENST00000238628 ZNF330Q9Y3S2 320 aaPredicted RBP11.31□□□□□ -0.6
IFT43-201ENST00000238628 FAM155AB1AL88 458 aaPredicted RBP11.3□□□□□ -0.6
IFT43-201ENST00000238628 EIF5P55010 431 aaKnown RBP11.3□□□□□ -0.6
IFT43-201ENST00000238628 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
IFT43-201ENST00000238628 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
IFT43-201ENST00000238628 KNSTRNQ9Y448 316 aa11.3□□□□□ -0.6
IFT43-201ENST00000238628 ARFGEF2Q9Y6D5 1785 aa11.3□□□□□ -0.6
IFT43-201ENST00000238628 AKAP11Q9UKA4 1901 aa11.29□□□□□ -0.6
IFT43-201ENST00000238628 HMOX1P09601 288 aa11.29□□□□□ -0.6
IFT43-201ENST00000238628 HSPA5P11021 654 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms