RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 HSPA4P34932 840 aa18.82■□□□□ 0.6
CTSD-201ENST00000236671 PPP1R42Q7Z4L9 355 aa18.82■□□□□ 0.6
CTSD-201ENST00000236671 NUTM1Q86Y26 1132 aa18.82■□□□□ 0.6
CTSD-201ENST00000236671 AFF2P51816 1311 aa18.82■□□□□ 0.6
CTSD-201ENST00000236671 CEMIPQ8WUJ3 1361 aa18.82■□□□□ 0.6
CTSD-201ENST00000236671 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
CTSD-201ENST00000236671 MSNP26038 577 aaKnown RBP18.81■□□□□ 0.6
CTSD-201ENST00000236671 COL14A1Q05707 1796 aaKnown RBP18.81■□□□□ 0.6
CTSD-201ENST00000236671 CPDO75976 1380 aa18.81■□□□□ 0.6
CTSD-201ENST00000236671 RGS17Q9UGC6 210 aaPredicted RBP18.8■□□□□ 0.6
CTSD-201ENST00000236671 BCL9LQ86UU0 1499 aa18.8■□□□□ 0.6
CTSD-201ENST00000236671 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
CTSD-201ENST00000236671 USHBP1Q8N6Y0 703 aa18.8■□□□□ 0.6
CTSD-201ENST00000236671 RHPN1Q8TCX5 695 aa18.8■□□□□ 0.6
CTSD-201ENST00000236671 NRAPQ86VF7 1730 aa18.79■□□□□ 0.6
CTSD-201ENST00000236671 RAD50Q92878 1312 aa18.79■□□□□ 0.6
CTSD-201ENST00000236671 NOL7Q9UMY1 257 aaKnown RBP18.79■□□□□ 0.6
CTSD-201ENST00000236671 OFD1O75665 1012 aa18.79■□□□□ 0.6
CTSD-201ENST00000236671 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.79■□□□□ 0.6
CTSD-201ENST00000236671 SLIT2O94813 1529 aa18.78■□□□□ 0.6
CTSD-201ENST00000236671 SGSM2O43147 1006 aa18.78■□□□□ 0.6
CTSD-201ENST00000236671 MAP4K4O95819 1239 aaPredicted RBP18.78■□□□□ 0.6
CTSD-201ENST00000236671 TPM2P07951 284 aa18.78■□□□□ 0.6
CTSD-201ENST00000236671 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
CTSD-201ENST00000236671 KDM3BQ7LBC6 1761 aa18.78■□□□□ 0.6
CTSD-201ENST00000236671 SRGAP3O43295 1099 aa18.77■□□□□ 0.6
CTSD-201ENST00000236671 NBPF7P0C2Y1 421 aaPredicted RBP18.77■□□□□ 0.6
CTSD-201ENST00000236671 USP21Q9UK80 565 aa18.77■□□□□ 0.6
CTSD-201ENST00000236671 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.6
CTSD-201ENST00000236671 EIF4A1P60842 406 aaKnown RBP18.77■□□□□ 0.6
CTSD-201ENST00000236671 KIF1BPQ96EK5 621 aa18.77■□□□□ 0.6
CTSD-201ENST00000236671 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.59
CTSD-201ENST00000236671 BEND3Q5T5X7 828 aa18.76■□□□□ 0.59
CTSD-201ENST00000236671 KIAA1211Q6ZU35 1233 aa18.76■□□□□ 0.59
CTSD-201ENST00000236671 LSG1Q9H089 658 aaKnown RBP18.76■□□□□ 0.59
CTSD-201ENST00000236671 WDR33Q9C0J8 1336 aaKnown RBP18.76■□□□□ 0.59
CTSD-201ENST00000236671 HOXB7P09629 217 aa18.76■□□□□ 0.59
CTSD-201ENST00000236671 IP6K1Q92551 441 aa18.76■□□□□ 0.59
CTSD-201ENST00000236671 RRP9O43818 475 aaKnown RBP18.75■□□□□ 0.59
CTSD-201ENST00000236671 ZNF500O60304 480 aaPredicted RBP18.75■□□□□ 0.59
CTSD-201ENST00000236671 EIF2S2P20042 333 aaKnown RBP18.75■□□□□ 0.59
CTSD-201ENST00000236671 FNBP4Q8N3X1 1017 aaPredicted RBP18.75■□□□□ 0.59
CTSD-201ENST00000236671 TTC14Q96N46 770 aa18.75■□□□□ 0.59
CTSD-201ENST00000236671 CHPF2Q9P2E5 772 aa18.75■□□□□ 0.59
CTSD-201ENST00000236671 SNX14Q9Y5W7 946 aa18.75■□□□□ 0.59
CTSD-201ENST00000236671 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
CTSD-201ENST00000236671 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
CTSD-201ENST00000236671 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
CTSD-201ENST00000236671 ANKRD24Q8TF21 1146 aa18.74■□□□□ 0.59
CTSD-201ENST00000236671 DNAAF4Q8WXU2 420 aa18.74■□□□□ 0.59
CTSD-201ENST00000236671 GADD45BO75293 160 aaPredicted RBP18.74■□□□□ 0.59
CTSD-201ENST00000236671 CNTROBQ8N137 903 aa18.74■□□□□ 0.59
CTSD-201ENST00000236671 SYAP1Q96A49 352 aaPredicted RBP18.74■□□□□ 0.59
CTSD-201ENST00000236671 LGR6Q9HBX8 967 aa18.74■□□□□ 0.59
CTSD-201ENST00000236671 ERBB3P21860 1342 aa18.74■□□□□ 0.59
CTSD-201ENST00000236671 PI4KAP2A4QPH2 592 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 PI4KAP1Q8N8J0 262 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 RNF214Q8ND24 703 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 TSPY26PQ9H489 355 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 GDPD2Q9HCC8 539 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 ZKSCAN5Q9Y2L8 839 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 CCDC9Q9Y3X0 531 aaKnown RBP18.73■□□□□ 0.59
CTSD-201ENST00000236671 ADCY9O60503 1353 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 EVA1CP58658 441 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 HSP90AA2PQ14568 343 aaPredicted RBP18.73■□□□□ 0.59
CTSD-201ENST00000236671 FOXD4L6Q3SYB3 417 aaPredicted RBP18.73■□□□□ 0.59
CTSD-201ENST00000236671 FOXD4L3Q6VB84 417 aaPredicted RBP18.73■□□□□ 0.59
CTSD-201ENST00000236671 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 TMEM87AQ8NBN3 555 aa18.73■□□□□ 0.59
CTSD-201ENST00000236671 CSB-PGBD3P0DP91 1061 aa18.72■□□□□ 0.59
CTSD-201ENST00000236671 NBPF6Q5VWK0 638 aa18.72■□□□□ 0.59
CTSD-201ENST00000236671 POTEAQ6S8J7 498 aa18.72■□□□□ 0.59
CTSD-201ENST00000236671 RASEFQ8IZ41 740 aa18.72■□□□□ 0.59
CTSD-201ENST00000236671 NBPF4Q96M43 638 aa18.72■□□□□ 0.59
CTSD-201ENST00000236671 KCNQ3O43525 872 aa18.71■□□□□ 0.59
CTSD-201ENST00000236671 AK2P54819 239 aa18.71■□□□□ 0.59
CTSD-201ENST00000236671 MCM5P33992 734 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 TOM1L2Q6ZVM7 507 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 RUFY3Q7L099 469 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 TERF1P54274 439 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 MTX1Q13505 466 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 QTRT2Q9H974 415 aaKnown RBP18.7■□□□□ 0.58
CTSD-201ENST00000236671 NLRP2Q9NX02 1062 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 CCDC39Q9UFE4 941 aa18.7■□□□□ 0.58
CTSD-201ENST00000236671 PHF14O94880 888 aa18.69■□□□□ 0.58
CTSD-201ENST00000236671 ANXA1P04083 346 aa18.69■□□□□ 0.58
CTSD-201ENST00000236671 CWC27Q6UX04 472 aaKnown RBP18.69■□□□□ 0.58
CTSD-201ENST00000236671 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
CTSD-201ENST00000236671 GLRX3O76003 335 aaKnown RBP18.68■□□□□ 0.58
CTSD-201ENST00000236671 LIMCH1Q9UPQ0 1083 aa18.68■□□□□ 0.58
CTSD-201ENST00000236671 SPG7Q9UQ90 795 aa18.68■□□□□ 0.58
CTSD-201ENST00000236671 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.68■□□□□ 0.58
CTSD-201ENST00000236671 GLI3P10071 1580 aa18.68■□□□□ 0.58
CTSD-201ENST00000236671 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
CTSD-201ENST00000236671 WDR17Q8IZU2 1322 aa18.68■□□□□ 0.58
CTSD-201ENST00000236671 BTBD11A6QL63 1104 aa18.67■□□□□ 0.58
CTSD-201ENST00000236671 CNPY2Q9Y2B0 182 aa18.67■□□□□ 0.58
CTSD-201ENST00000236671 TCHHQ07283 1943 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms