RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 DDX58O95786 925 aaKnown RBP12.98□□□□□ -0.33
HMGCL-201ENST00000235958 FKBP5Q13451 457 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-201ENST00000235958 HLFQ16534 295 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 KIF6Q6ZMV9 814 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 PLBD2Q8NHP8 589 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
HMGCL-201ENST00000235958 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
HMGCL-201ENST00000235958 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
HMGCL-201ENST00000235958 FRAT1Q92837 279 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-201ENST00000235958 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
HMGCL-201ENST00000235958 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
HMGCL-201ENST00000235958 F6X3S4 739 aa12.96□□□□□ -0.33
HMGCL-201ENST00000235958 GYS1P13807 737 aa12.96□□□□□ -0.33
HMGCL-201ENST00000235958 FKBP8Q14318 412 aa12.96□□□□□ -0.33
HMGCL-201ENST00000235958 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
HMGCL-201ENST00000235958 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
HMGCL-201ENST00000235958 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
HMGCL-201ENST00000235958 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
HMGCL-201ENST00000235958 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
HMGCL-201ENST00000235958 PTPRCP08575 1304 aa12.95□□□□□ -0.34
HMGCL-201ENST00000235958 TCIRG1Q13488 830 aa12.95□□□□□ -0.34
HMGCL-201ENST00000235958 GIGYF2Q6Y7W6 1299 aaKnown RBP12.95□□□□□ -0.34
HMGCL-201ENST00000235958 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
HMGCL-201ENST00000235958 PLIN1O60240 522 aa12.94□□□□□ -0.34
HMGCL-201ENST00000235958 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
HMGCL-201ENST00000235958 METTL22Q9BUU2 404 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-201ENST00000235958 ZNF652Q9Y2D9 606 aa12.94□□□□□ -0.34
HMGCL-201ENST00000235958 NUP98P52948 1817 aa12.94□□□□□ -0.34
HMGCL-201ENST00000235958 ADCY9O60503 1353 aa12.94□□□□□ -0.34
HMGCL-201ENST00000235958 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 RGL2O15211 777 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 TM4SF1P30408 202 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 MSL1Q68DK7 614 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 SLC4A10Q6U841 1118 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
HMGCL-201ENST00000235958 API5Q9BZZ5 524 aaKnown RBP12.93□□□□□ -0.34
HMGCL-201ENST00000235958 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
HMGCL-201ENST00000235958 TRIM27P14373 513 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 GPTP24298 496 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 NFIXQ14938 502 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 QSER1Q2KHR3 1735 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 SETDB2Q96T68 719 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 MYD88Q99836 296 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
HMGCL-201ENST00000235958 SUPT16HQ9Y5B9 1047 aaKnown RBP12.92□□□□□ -0.34
HMGCL-201ENST00000235958 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
HMGCL-201ENST00000235958 IGKV5-2P06315 115 aa12.91□□□□□ -0.34
HMGCL-201ENST00000235958 CENPBP07199 599 aaPredicted RBP12.91□□□□□ -0.34
HMGCL-201ENST00000235958 NEXNQ0ZGT2 675 aa12.91□□□□□ -0.34
HMGCL-201ENST00000235958 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
HMGCL-201ENST00000235958 ISCA1Q9BUE6 129 aa12.91□□□□□ -0.34
HMGCL-201ENST00000235958 NIP7Q9Y221 180 aaKnown RBP eCLIP12.91□□□□□ -0.34
HMGCL-201ENST00000235958 BEND3Q5T5X7 828 aa12.9□□□□□ -0.34
HMGCL-201ENST00000235958 DZIP1LQ8IYY4 767 aaKnown RBP12.9□□□□□ -0.34
HMGCL-201ENST00000235958 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.9□□□□□ -0.34
HMGCL-201ENST00000235958 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
HMGCL-201ENST00000235958 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
HMGCL-201ENST00000235958 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
HMGCL-201ENST00000235958 MMP10P09238 476 aa12.89□□□□□ -0.35
HMGCL-201ENST00000235958 RLBP1P12271 317 aa12.89□□□□□ -0.35
HMGCL-201ENST00000235958 CWF19L2Q2TBE0 894 aaKnown RBP12.89□□□□□ -0.35
HMGCL-201ENST00000235958 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
HMGCL-201ENST00000235958 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
HMGCL-201ENST00000235958 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
HMGCL-201ENST00000235958 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 SERPINB2P05120 415 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 MS4A1P11836 297 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 DDR1Q08345 913 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
HMGCL-201ENST00000235958 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 PANK1Q8TE04 598 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
HMGCL-201ENST00000235958 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
HMGCL-201ENST00000235958 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
HMGCL-201ENST00000235958 RRP1P56182 461 aaKnown RBP12.87□□□□□ -0.35
HMGCL-201ENST00000235958 GCKRQ14397 625 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 C20orf194Q5TEA3 1177 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 FTSJ3Q8IY81 847 aaKnown RBP12.87□□□□□ -0.35
HMGCL-201ENST00000235958 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
HMGCL-201ENST00000235958 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms