RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 PTMSP20962 102 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 CUL4AQ13619 759 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 RUFY3Q7L099 469 aa11.06□□□□□ -0.64
SYDE2-201ENST00000234668 ANP32BQ92688 251 aaKnown RBP11.06□□□□□ -0.64
SYDE2-201ENST00000234668 EAF2Q96CJ1 260 aaPredicted RBP11.06□□□□□ -0.64
SYDE2-201ENST00000234668 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
SYDE2-201ENST00000234668 KCNJ4P48050 445 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 EPHA10Q5JZY3 1008 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 USP48Q86UV5 1035 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 CCDC83Q8IWF9 413 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 JAKMIP1Q96N16 626 aaKnown RBP11.05□□□□□ -0.64
SYDE2-201ENST00000234668 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 ANKARQ7Z5J8 1434 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 SASH1O94885 1247 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 COPS6Q7L5N1 327 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 CNPY2Q9Y2B0 182 aa11.05□□□□□ -0.64
SYDE2-201ENST00000234668 XAGE3Q8WTP9 111 aa11.04□□□□□ -0.64
SYDE2-201ENST00000234668 MYD88Q99836 296 aa11.04□□□□□ -0.64
SYDE2-201ENST00000234668 CHMP3Q9Y3E7 222 aa11.04□□□□□ -0.64
SYDE2-201ENST00000234668 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
SYDE2-201ENST00000234668 ZNF445P59923 1031 aa11.04□□□□□ -0.64
SYDE2-201ENST00000234668 RAD50Q92878 1312 aa11.04□□□□□ -0.64
SYDE2-201ENST00000234668 GRM8O00222 908 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 ANAPC15P60006 121 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 G3BP1Q13283 466 aaKnown RBP eCLIP11.03□□□□□ -0.64
SYDE2-201ENST00000234668 AMOTQ4VCS5 1084 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 ECHDC1Q9NTX5 307 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
SYDE2-201ENST00000234668 FIBPO43427 364 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 GLRX3O76003 335 aaKnown RBP11.03□□□□□ -0.64
SYDE2-201ENST00000234668 MCM2P49736 904 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 PDIA6Q15084 440 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 FAM173BQ6P4H8 233 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 RAPGEF4Q8WZA2 1011 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 ZNF496Q96IT1 587 aaPredicted RBP11.03□□□□□ -0.64
SYDE2-201ENST00000234668 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 SLFNL1Q499Z3 407 aa11.03□□□□□ -0.64
SYDE2-201ENST00000234668 XRN1Q8IZH2 1706 aaKnown RBP11.03□□□□□ -0.64
SYDE2-201ENST00000234668 SYT1P21579 422 aa11.02□□□□□ -0.65
SYDE2-201ENST00000234668 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.65
SYDE2-201ENST00000234668 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
SYDE2-201ENST00000234668 ZNF790Q6PG37 636 aa11.02□□□□□ -0.65
SYDE2-201ENST00000234668 FERMT3Q86UX7 667 aa11.02□□□□□ -0.65
SYDE2-201ENST00000234668 PPFIA3O75145 1194 aa11.02□□□□□ -0.65
SYDE2-201ENST00000234668 STK3Q13188 491 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 TTC14Q96N46 770 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 PDRG1Q9NUG6 133 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 SMC3Q9UQE7 1217 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 A0A0D9SFI3 127 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
SYDE2-201ENST00000234668 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 LRSAM1Q6UWE0 723 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 LINS1Q8NG48 757 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 DDX21Q9NR30 783 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYDE2-201ENST00000234668 LIMCH1Q9UPQ0 1083 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 FER1L4A9Z1Z3 1794 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 INTS4Q96HW7 963 aaKnown RBP11.01□□□□□ -0.65
SYDE2-201ENST00000234668 PPP1R9BQ96SB3 815 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 FSD1Q9BTV5 496 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 HYPKQ9NX55 129 aa11.01□□□□□ -0.65
SYDE2-201ENST00000234668 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
SYDE2-201ENST00000234668 FAM208AQ9UK61 1670 aaKnown RBP11□□□□□ -0.65
SYDE2-201ENST00000234668 HOXB7P09629 217 aa11□□□□□ -0.65
SYDE2-201ENST00000234668 GJB2P29033 226 aa11□□□□□ -0.65
SYDE2-201ENST00000234668 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
SYDE2-201ENST00000234668 MARF1Q9Y4F3 1742 aaKnown RBP11□□□□□ -0.65
SYDE2-201ENST00000234668 DNM1Q05193 864 aaKnown RBP11□□□□□ -0.65
SYDE2-201ENST00000234668 CCDC129Q6ZRS4 1044 aa11□□□□□ -0.65
SYDE2-201ENST00000234668 ZNF589Q86UQ0 364 aaPredicted RBP11□□□□□ -0.65
SYDE2-201ENST00000234668 AOX1Q06278 1338 aa11□□□□□ -0.65
SYDE2-201ENST00000234668 LTN1O94822 1766 aa10.99□□□□□ -0.65
SYDE2-201ENST00000234668 STX6O43752 255 aa10.99□□□□□ -0.65
SYDE2-201ENST00000234668 ALDH1L1O75891 902 aa10.99□□□□□ -0.65
SYDE2-201ENST00000234668 ME3Q16798 604 aa10.99□□□□□ -0.65
SYDE2-201ENST00000234668 ZNF830Q96NB3 372 aaPredicted RBP10.99□□□□□ -0.65
SYDE2-201ENST00000234668 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
SYDE2-201ENST00000234668 ZNF330Q9Y3S2 320 aaPredicted RBP10.99□□□□□ -0.65
SYDE2-201ENST00000234668 WDR33Q9C0J8 1336 aaKnown RBP10.99□□□□□ -0.65
SYDE2-201ENST00000234668 RPAP1Q9BWH6 1393 aaPredicted RBP10.99□□□□□ -0.65
SYDE2-201ENST00000234668 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
SYDE2-201ENST00000234668 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
SYDE2-201ENST00000234668 NFAT5O94916 1531 aa10.99□□□□□ -0.65
SYDE2-201ENST00000234668 ERBB3P21860 1342 aa10.99□□□□□ -0.65
SYDE2-201ENST00000234668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.98□□□□□ -0.65
SYDE2-201ENST00000234668 NEURL1BA8MQ27 555 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 ZSCAN22P10073 491 aaPredicted RBP10.98□□□□□ -0.65
SYDE2-201ENST00000234668 MSNP26038 577 aaKnown RBP10.98□□□□□ -0.65
SYDE2-201ENST00000234668 CREB3L3Q68CJ9 461 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 TPCN1Q9ULQ1 816 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 FOSBP53539 338 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 NEXNQ0ZGT2 675 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 ST3GAL1Q11201 340 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 TFCP2Q12800 502 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
SYDE2-201ENST00000234668 ZSCAN30Q86W11 494 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms