RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 MIS18AQ9NYP9 233 aa13.77□□□□□ -0.21
RPS13-201ENST00000228140 RNF181Q9P0P0 153 aa13.77□□□□□ -0.21
RPS13-201ENST00000228140 NBPF26B4DH59 902 aa13.76□□□□□ -0.21
RPS13-201ENST00000228140 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
RPS13-201ENST00000228140 RIPK4P57078 832 aa13.76□□□□□ -0.21
RPS13-201ENST00000228140 NBPF10Q6P3W6 841 aaKnown RBP13.76□□□□□ -0.21
RPS13-201ENST00000228140 NBPF5PQ86XG9 351 aaPredicted RBP13.76□□□□□ -0.21
RPS13-201ENST00000228140 NBPF15Q8N660 670 aa13.76□□□□□ -0.21
RPS13-201ENST00000228140 ANKRD36CQ5JPF3 1778 aa13.76□□□□□ -0.21
RPS13-201ENST00000228140 EIF4A1P60842 406 aaKnown RBP13.75□□□□□ -0.21
RPS13-201ENST00000228140 TPTE2Q6XPS3 522 aa13.75□□□□□ -0.21
RPS13-201ENST00000228140 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
RPS13-201ENST00000228140 CNKSR1Q969H4 720 aa13.75□□□□□ -0.21
RPS13-201ENST00000228140 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPS13-201ENST00000228140 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
RPS13-201ENST00000228140 SLX4Q8IY92 1834 aa13.75□□□□□ -0.21
RPS13-201ENST00000228140 KIF3CO14782 793 aa13.74□□□□□ -0.21
RPS13-201ENST00000228140 LMNB1P20700 586 aa13.74□□□□□ -0.21
RPS13-201ENST00000228140 SOGA3Q5TF21 947 aa13.74□□□□□ -0.21
RPS13-201ENST00000228140 STYK1Q6J9G0 422 aa13.74□□□□□ -0.21
RPS13-201ENST00000228140 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
RPS13-201ENST00000228140 NIP7Q9Y221 180 aaKnown RBP eCLIP13.74□□□□□ -0.216e-10■■□□□ 13.9
RPS13-201ENST00000228140 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
RPS13-201ENST00000228140 TOMM70O94826 608 aa13.73□□□□□ -0.21
RPS13-201ENST00000228140 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
RPS13-201ENST00000228140 C16orf71Q8IYS4 520 aaPredicted RBP13.73□□□□□ -0.21
RPS13-201ENST00000228140 RUNDC1Q96C34 613 aa13.73□□□□□ -0.21
RPS13-201ENST00000228140 MASTLQ96GX5 879 aa13.73□□□□□ -0.21
RPS13-201ENST00000228140 SRGNP10124 158 aa13.72□□□□□ -0.21
RPS13-201ENST00000228140 HSPA6P17066 643 aa13.72□□□□□ -0.21
RPS13-201ENST00000228140 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
RPS13-201ENST00000228140 RASSF7Q02833 373 aa13.72□□□□□ -0.21
RPS13-201ENST00000228140 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
RPS13-201ENST00000228140 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
RPS13-201ENST00000228140 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
RPS13-201ENST00000228140 MAP3K15Q6ZN16 1313 aa13.71□□□□□ -0.21
RPS13-201ENST00000228140 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
RPS13-201ENST00000228140 PRKRIP1Q9H875 184 aaPredicted RBP13.71□□□□□ -0.21
RPS13-201ENST00000228140 NMRK2Q9NPI5 230 aa13.71□□□□□ -0.21
RPS13-201ENST00000228140 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
RPS13-201ENST00000228140 RIC1Q4ADV7 1423 aa13.71□□□□□ -0.22
RPS13-201ENST00000228140 LTBP3Q9NS15 1303 aa13.7□□□□□ -0.22
RPS13-201ENST00000228140 C21orf2O43822 256 aa13.7□□□□□ -0.22
RPS13-201ENST00000228140 MYL6BP14649 208 aa13.7□□□□□ -0.22
RPS13-201ENST00000228140 NPR1P16066 1061 aa13.7□□□□□ -0.22
RPS13-201ENST00000228140 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
RPS13-201ENST00000228140 WDR90Q96KV7 1748 aa13.7□□□□□ -0.22
RPS13-201ENST00000228140 NFKBIEO00221 500 aa13.69□□□□□ -0.22
RPS13-201ENST00000228140 HLFQ16534 295 aa13.69□□□□□ -0.22
RPS13-201ENST00000228140 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
RPS13-201ENST00000228140 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
RPS13-201ENST00000228140 RBM46Q8TBY0 533 aaKnown RBP13.69□□□□□ -0.22
RPS13-201ENST00000228140 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
RPS13-201ENST00000228140 KLRG2A4D1S0 409 aaPredicted RBP13.68□□□□□ -0.22
RPS13-201ENST00000228140 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
RPS13-201ENST00000228140 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
RPS13-201ENST00000228140 ZBTB3Q9H5J0 574 aa13.68□□□□□ -0.22
RPS13-201ENST00000228140 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
RPS13-201ENST00000228140 GLTPD2A6NH11 291 aa13.67□□□□□ -0.22
RPS13-201ENST00000228140 ALDH1B1P30837 517 aa13.67□□□□□ -0.22
RPS13-201ENST00000228140 PARP10Q53GL7 1025 aa13.67□□□□□ -0.22
RPS13-201ENST00000228140 CCDC93Q567U6 631 aa13.67□□□□□ -0.22
RPS13-201ENST00000228140 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
RPS13-201ENST00000228140 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
RPS13-201ENST00000228140 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
RPS13-201ENST00000228140 EIF2S2P20042 333 aaKnown RBP13.66□□□□□ -0.22
RPS13-201ENST00000228140 APLP1P51693 650 aa13.66□□□□□ -0.22
RPS13-201ENST00000228140 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
RPS13-201ENST00000228140 FSTL1Q12841 308 aa13.66□□□□□ -0.22
RPS13-201ENST00000228140 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
RPS13-201ENST00000228140 PPP1R42Q7Z4L9 355 aa13.66□□□□□ -0.22
RPS13-201ENST00000228140 ADAMTS8Q9UP79 889 aa13.66□□□□□ -0.22
RPS13-201ENST00000228140 SCN4AP35499 1836 aa13.66□□□□□ -0.22
RPS13-201ENST00000228140 LAMB2P55268 1798 aa13.66□□□□□ -0.22
RPS13-201ENST00000228140 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
RPS13-201ENST00000228140 CHL1O00533 1208 aa13.65□□□□□ -0.22
RPS13-201ENST00000228140 HOXB7P09629 217 aa13.65□□□□□ -0.22
RPS13-201ENST00000228140 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
RPS13-201ENST00000228140 HSP90AB3PQ58FF7 597 aa13.65□□□□□ -0.22
RPS13-201ENST00000228140 RRAGCQ9HB90 399 aa13.65□□□□□ -0.22
RPS13-201ENST00000228140 TRIM35Q9UPQ4 493 aa13.65□□□□□ -0.22
RPS13-201ENST00000228140 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
RPS13-201ENST00000228140 ABCC12Q96J65 1359 aa13.65□□□□□ -0.22
RPS13-201ENST00000228140 GPTP24298 496 aa13.64□□□□□ -0.23
RPS13-201ENST00000228140 PRELPP51888 382 aa13.64□□□□□ -0.23
RPS13-201ENST00000228140 CRY2Q49AN0 593 aa13.64□□□□□ -0.23
RPS13-201ENST00000228140 ZNF34Q8IZ26 560 aa13.64□□□□□ -0.23
RPS13-201ENST00000228140 RTKN2Q8IZC4 609 aa13.64□□□□□ -0.23
RPS13-201ENST00000228140 SMC1BQ8NDV3 1235 aa13.64□□□□□ -0.23
RPS13-201ENST00000228140 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
RPS13-201ENST00000228140 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
RPS13-201ENST00000228140 PDIA6Q15084 440 aa13.63□□□□□ -0.23
RPS13-201ENST00000228140 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
RPS13-201ENST00000228140 CC2D2BQ6DHV5 1058 aa13.63□□□□□ -0.23
RPS13-201ENST00000228140 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
RPS13-201ENST00000228140 C7orf43Q8WVR3 580 aa13.63□□□□□ -0.23
RPS13-201ENST00000228140 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
RPS13-201ENST00000228140 DDX21Q9NR30 783 aaKnown RBP eCLIP13.63□□□□□ -0.233e-12■■□□□ 13.7
RPS13-201ENST00000228140 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
RPS13-201ENST00000228140 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms