RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ARHGEF40Q8TER5 1519 aa16.17■□□□□ 0.18
RAB3D-201ENST00000222120 USP48Q86UV5 1035 aa16.17■□□□□ 0.18
RAB3D-201ENST00000222120 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
RAB3D-201ENST00000222120 RALYLQ86SE5 291 aaKnown RBP16.16■□□□□ 0.18
RAB3D-201ENST00000222120 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
RAB3D-201ENST00000222120 RBM8AQ9Y5S9 174 aaKnown RBP16.16■□□□□ 0.18
RAB3D-201ENST00000222120 ZNF592Q92610 1267 aa16.16■□□□□ 0.18
RAB3D-201ENST00000222120 GUCY1B3Q02153 619 aa16.16■□□□□ 0.18
RAB3D-201ENST00000222120 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
RAB3D-201ENST00000222120 VWDEQ8N2E2 1590 aa16.16■□□□□ 0.18
RAB3D-201ENST00000222120 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 DIP2CQ9Y2E4 1556 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
RAB3D-201ENST00000222120 CDK12Q9NYV4 1490 aaPredicted RBP16.15■□□□□ 0.18
RAB3D-201ENST00000222120 ARHGEF10O15013 1369 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 TRDNQ13061 729 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 ZSCAN31Q96LW9 406 aaPredicted RBP16.15■□□□□ 0.18
RAB3D-201ENST00000222120 CEP126Q9P2H0 1117 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 CKAP2LQ8IYA6 745 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
RAB3D-201ENST00000222120 GOLIM4O00461 696 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
RAB3D-201ENST00000222120 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 ANAPC15P60006 121 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 NMIQ13287 307 aaPredicted RBP16.14■□□□□ 0.17
RAB3D-201ENST00000222120 GIMAP6Q6P9H5 292 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 SDF4Q9BRK5 362 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 PTCH1Q13635 1447 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 CCDC73Q6ZRK6 1079 aa16.14■□□□□ 0.17
RAB3D-201ENST00000222120 CCT2P78371 535 aaKnown RBP16.14■□□□□ 0.17
RAB3D-201ENST00000222120 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
RAB3D-201ENST00000222120 NRDCO43847 1150 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 TTC39AQ5SRH9 613 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 FAM227BQ96M60 508 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 RBSNQ9H1K0 784 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 TNMDQ9H2S6 317 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 RRP9O43818 475 aaKnown RBP16.13■□□□□ 0.17
RAB3D-201ENST00000222120 LMBR1LQ6UX01 489 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 KIF2CQ99661 725 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 CNNM1Q9NRU3 951 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 MROH1Q8NDA8 1641 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 DNM1Q05193 864 aaKnown RBP16.13■□□□□ 0.17
RAB3D-201ENST00000222120 ANKRD1Q15327 319 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 ZNF830Q96NB3 372 aaPredicted RBP16.13■□□□□ 0.17
RAB3D-201ENST00000222120 LMBRD1Q9NUN5 540 aa16.13■□□□□ 0.17
RAB3D-201ENST00000222120 PIK3C2BO00750 1634 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 LRRFIP1Q32MZ4 808 aaKnown RBP16.12■□□□□ 0.17
RAB3D-201ENST00000222120 RAB11FIP4Q86YS3 637 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 ALDH1L1O75891 902 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
RAB3D-201ENST00000222120 GPTP24298 496 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 FAM173BQ6P4H8 233 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 CCDC158Q5M9N0 1113 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
RAB3D-201ENST00000222120 ZSCAN22P10073 491 aaPredicted RBP16.11■□□□□ 0.17
RAB3D-201ENST00000222120 SUCLG2Q96I99 432 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 DEPDC5O75140 1603 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 FRMPD1Q5SYB0 1578 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 SGSM2O43147 1006 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 CCDC192P0DO97 292 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 LRSAM1Q6UWE0 723 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 SSH3Q8TE77 659 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 SNX14Q9Y5W7 946 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 IFIT1P09914 478 aaKnown RBP16.11■□□□□ 0.17
RAB3D-201ENST00000222120 SYT1P21579 422 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 ME1P48163 572 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 HAND2P61296 217 aa16.11■□□□□ 0.17
RAB3D-201ENST00000222120 CLCN1P35523 988 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 CPS1P31327 1500 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 MYOM1P52179 1685 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 GADD45BO75293 160 aaPredicted RBP16.1■□□□□ 0.17
RAB3D-201ENST00000222120 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
RAB3D-201ENST00000222120 CCDC183Q5T5S1 534 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 KIF6Q6ZMV9 814 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 NUP62CLQ9H1M0 184 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
RAB3D-201ENST00000222120 KIF24Q5T7B8 1368 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 CPSF1Q10570 1443 aaKnown RBP16.1■□□□□ 0.17
RAB3D-201ENST00000222120 SYNE3Q6ZMZ3 975 aa16.1■□□□□ 0.17
RAB3D-201ENST00000222120 SH2B1Q9NRF2 756 aaPredicted RBP16.1■□□□□ 0.17
RAB3D-201ENST00000222120 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
RAB3D-201ENST00000222120 PLEKHG1Q9ULL1 1385 aa16.09■□□□□ 0.17
RAB3D-201ENST00000222120 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
RAB3D-201ENST00000222120 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
RAB3D-201ENST00000222120 GIGYF1O75420 1035 aaPredicted RBP16.09■□□□□ 0.17
RAB3D-201ENST00000222120 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
RAB3D-201ENST00000222120 HSPA2P54652 639 aa16.09■□□□□ 0.17
RAB3D-201ENST00000222120 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
RAB3D-201ENST00000222120 IDH1O75874 414 aaKnown RBP16.08■□□□□ 0.17
RAB3D-201ENST00000222120 BRF1Q92994 677 aa16.08■□□□□ 0.17
RAB3D-201ENST00000222120 ZMYND15Q9H091 742 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms