RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 SNRPA1P09661 255 aaKnown RBP21.08■□□□□ 0.97
NME3-201ENST00000219302 U2AF1L5P0DN76 240 aaPredicted RBP21.08■□□□□ 0.97
NME3-201ENST00000219302 U2AF1Q01081 240 aaKnown RBP eCLIP21.08■□□□□ 0.97
NME3-201ENST00000219302 ERFEQ4G0M1 354 aa21.08■□□□□ 0.97
NME3-201ENST00000219302 PCNTO95613 3336 aa21.07■□□□□ 0.96
NME3-201ENST00000219302 FER1L6Q2WGJ9 1857 aa21.07■□□□□ 0.96
NME3-201ENST00000219302 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
NME3-201ENST00000219302 C7orf43Q8WVR3 580 aa21.07■□□□□ 0.96
NME3-201ENST00000219302 MASTLQ96GX5 879 aa21.07■□□□□ 0.96
NME3-201ENST00000219302 NBPF26B4DH59 902 aa21.06■□□□□ 0.96
NME3-201ENST00000219302 ST5P78524 1137 aa21.06■□□□□ 0.96
NME3-201ENST00000219302 DCTN1Q14203 1278 aa21.06■□□□□ 0.96
NME3-201ENST00000219302 PRPF40BQ6NWY9 871 aaKnown RBP21.06■□□□□ 0.96
NME3-201ENST00000219302 NBPF10Q6P3W6 841 aaKnown RBP21.06■□□□□ 0.96
NME3-201ENST00000219302 NBPF15Q8N660 670 aa21.06■□□□□ 0.96
NME3-201ENST00000219302 RTF1Q92541 710 aaKnown RBP21.06■□□□□ 0.96
NME3-201ENST00000219302 TAOK3Q9H2K8 898 aa21.06■□□□□ 0.96
NME3-201ENST00000219302 SLX4Q8IY92 1834 aa21.06■□□□□ 0.96
NME3-201ENST00000219302 TIAM2Q8IVF5 1701 aa21.05■□□□□ 0.96
NME3-201ENST00000219302 HTATSF1O43719 755 aaKnown RBP21.05■□□□□ 0.96
NME3-201ENST00000219302 DICER1Q9UPY3 1922 aaKnown RBP21.04■□□□□ 0.96
NME3-201ENST00000219302 KLRG2A4D1S0 409 aaPredicted RBP21.04■□□□□ 0.96
NME3-201ENST00000219302 NPHP1O15259 732 aa21.04■□□□□ 0.96
NME3-201ENST00000219302 COL13A1Q5TAT6 717 aaPredicted RBP21.04■□□□□ 0.96
NME3-201ENST00000219302 RGL2O15211 777 aa21.03■□□□□ 0.96
NME3-201ENST00000219302 NBPF5PQ86XG9 351 aaPredicted RBP21.03■□□□□ 0.96
NME3-201ENST00000219302 BCORQ6W2J9 1755 aa21.02■□□□□ 0.96
NME3-201ENST00000219302 DDNO94850 711 aaPredicted RBP21.02■□□□□ 0.96
NME3-201ENST00000219302 TAF7Q15545 349 aaPredicted RBP21.02■□□□□ 0.96
NME3-201ENST00000219302 SOGA3Q5TF21 947 aa21.02■□□□□ 0.96
NME3-201ENST00000219302 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
NME3-201ENST00000219302 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
NME3-201ENST00000219302 NPR1P16066 1061 aa21■□□□□ 0.95
NME3-201ENST00000219302 NIP7Q9Y221 180 aaKnown RBP eCLIP21■□□□□ 0.95
NME3-201ENST00000219302 HLFQ16534 295 aa20.99■□□□□ 0.95
NME3-201ENST00000219302 MIS18AQ9NYP9 233 aa20.99■□□□□ 0.95
NME3-201ENST00000219302 POTEIP0CG38 1075 aa20.98■□□□□ 0.95
NME3-201ENST00000219302 POTEJP0CG39 1038 aa20.98■□□□□ 0.95
NME3-201ENST00000219302 CHADLQ6NUI6 762 aa20.98■□□□□ 0.95
NME3-201ENST00000219302 CCDC93Q567U6 631 aa20.97■□□□□ 0.95
NME3-201ENST00000219302 ARFGEF2Q9Y6D5 1785 aa20.97■□□□□ 0.95
NME3-201ENST00000219302 L3MBTL3Q96JM7 780 aaPredicted RBP20.96■□□□□ 0.95
NME3-201ENST00000219302 FKBP4Q02790 459 aaKnown RBP eCLIP20.95■□□□□ 0.94
NME3-201ENST00000219302 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
NME3-201ENST00000219302 CACNA1SQ13698 1873 aa20.94■□□□□ 0.94
NME3-201ENST00000219302 FAM177BA6PVY3 158 aa20.94■□□□□ 0.94
NME3-201ENST00000219302 PLEKHF1Q96S99 279 aa20.94■□□□□ 0.94
NME3-201ENST00000219302 HSPA1AP0DMV8 641 aaKnown RBP20.93■□□□□ 0.94
NME3-201ENST00000219302 HSPA1BP0DMV9 641 aaKnown RBP20.93■□□□□ 0.94
NME3-201ENST00000219302 RTKN2Q8IZC4 609 aa20.93■□□□□ 0.94
NME3-201ENST00000219302 PNISRQ8TF01 805 aaKnown RBP20.93■□□□□ 0.94
NME3-201ENST00000219302 TAF1DQ9H5J8 278 aaPredicted RBP20.93■□□□□ 0.94
NME3-201ENST00000219302 ZNF277Q9NRM2 450 aaPredicted RBP20.93■□□□□ 0.94
NME3-201ENST00000219302 CREBZFQ9NS37 354 aa20.93■□□□□ 0.94
NME3-201ENST00000219302 IQCA1LA6NCM1 817 aa20.92■□□□□ 0.94
NME3-201ENST00000219302 ERVV-1B6SEH8 477 aa20.92■□□□□ 0.94
NME3-201ENST00000219302 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
NME3-201ENST00000219302 ALDH1B1P30837 517 aa20.91■□□□□ 0.94
NME3-201ENST00000219302 CRY2Q49AN0 593 aa20.91■□□□□ 0.94
NME3-201ENST00000219302 PASKQ96RG2 1323 aa20.9■□□□□ 0.94
NME3-201ENST00000219302 ZNF541Q9H0D2 1346 aa20.9■□□□□ 0.94
NME3-201ENST00000219302 LDHDQ86WU2 507 aa20.9■□□□□ 0.94
NME3-201ENST00000219302 NGEFQ8N5V2 710 aa20.9■□□□□ 0.94
NME3-201ENST00000219302 MAP3K15Q6ZN16 1313 aa20.89■□□□□ 0.93
NME3-201ENST00000219302 FZD9O00144 591 aa20.89■□□□□ 0.93
NME3-201ENST00000219302 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
NME3-201ENST00000219302 TTLL7Q6ZT98 887 aa20.89■□□□□ 0.93
NME3-201ENST00000219302 TNS4Q8IZW8 715 aa20.89■□□□□ 0.93
NME3-201ENST00000219302 SYNE4Q8N205 404 aa20.89■□□□□ 0.93
NME3-201ENST00000219302 SNED1Q8TER0 1413 aa20.88■□□□□ 0.93
NME3-201ENST00000219302 ITGBL1O95965 494 aaPredicted RBP20.88■□□□□ 0.93
NME3-201ENST00000219302 NFE2L2Q16236 605 aa20.88■□□□□ 0.93
NME3-201ENST00000219302 NUTM1Q86Y26 1132 aa20.88■□□□□ 0.93
NME3-201ENST00000219302 THUMPD2Q9BTF0 503 aaKnown RBP20.88■□□□□ 0.93
NME3-201ENST00000219302 NYXQ9GZU5 481 aa20.88■□□□□ 0.93
NME3-201ENST00000219302 RRP7AQ9Y3A4 280 aaKnown RBP20.88■□□□□ 0.93
NME3-201ENST00000219302 SCN4AP35499 1836 aa20.88■□□□□ 0.93
NME3-201ENST00000219302 ABCC12Q96J65 1359 aa20.87■□□□□ 0.93
NME3-201ENST00000219302 NEFMP07197 916 aa20.87■□□□□ 0.93
NME3-201ENST00000219302 IARSP41252 1262 aaKnown RBP20.87■□□□□ 0.93
NME3-201ENST00000219302 MKRN1Q9UHC7 482 aaKnown RBP20.87■□□□□ 0.93
NME3-201ENST00000219302 DLG5Q8TDM6 1919 aa20.86■□□□□ 0.93
NME3-201ENST00000219302 HOXA10P31260 410 aaPredicted RBP20.86■□□□□ 0.93
NME3-201ENST00000219302 PSMD1Q99460 953 aa20.86■□□□□ 0.93
NME3-201ENST00000219302 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
NME3-201ENST00000219302 KDM3BQ7LBC6 1761 aa20.85■□□□□ 0.93
NME3-201ENST00000219302 UBN2Q6ZU65 1347 aa20.85■□□□□ 0.93
NME3-201ENST00000219302 SUSD4Q5VX71 490 aa20.85■□□□□ 0.93
NME3-201ENST00000219302 ZNF34Q8IZ26 560 aa20.85■□□□□ 0.93
NME3-201ENST00000219302 HACL1Q9UJ83 578 aa20.85■□□□□ 0.93
NME3-201ENST00000219302 NUP98P52948 1817 aa20.84■□□□□ 0.93
NME3-201ENST00000219302 MYL6BP14649 208 aa20.84■□□□□ 0.93
NME3-201ENST00000219302 EPHX2P34913 555 aa20.84■□□□□ 0.93
NME3-201ENST00000219302 CC2D2BQ6DHV5 1058 aa20.84■□□□□ 0.93
NME3-201ENST00000219302 CNTNAP1P78357 1384 aa20.84■□□□□ 0.93
NME3-201ENST00000219302 GPTP24298 496 aa20.83■□□□□ 0.93
NME3-201ENST00000219302 KIF6Q6ZMV9 814 aa20.83■□□□□ 0.93
NME3-201ENST00000219302 LRP10Q7Z4F1 713 aa20.83■□□□□ 0.93
NME3-201ENST00000219302 GPC2Q8N158 579 aa20.83■□□□□ 0.93
NME3-201ENST00000219302 ZBTB3Q9H5J0 574 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms