RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
VSIG1-201ENST00000217957 FAM198AQ9UFP1 575 aa10.94□□□□□ -0.66
VSIG1-201ENST00000217957 FOSP01100 380 aaPredicted RBP10.93□□□□□ -0.66
VSIG1-201ENST00000217957 DAB2P98082 770 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 SERINC3Q13530 473 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 BRD3Q15059 726 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 NRDCO43847 1150 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 CLIP1P30622 1438 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 ETFBP38117 255 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 PAK2Q13177 524 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 MTMR2Q13614 643 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 NFE2L2Q16236 605 aa10.93□□□□□ -0.66
VSIG1-201ENST00000217957 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
VSIG1-201ENST00000217957 NEO1Q92859 1461 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 IGF1RP08069 1367 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 PRPF40AO75400 957 aaKnown RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 POLD1P28340 1107 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 MEI1Q5TIA1 1274 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 PLPP7Q8NBV4 271 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 HNRNPLLQ8WVV9 542 aaKnown RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 SRA1Q9HD15 236 aaKnown RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 SYNMO15061 1565 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 CPS1P31327 1500 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 CDK12Q9NYV4 1490 aaPredicted RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 HMGB1P1B2RPK0 211 aaPredicted RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 CD53P19397 219 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 SLC4A10Q6U841 1118 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 TSEN2Q8NCE0 465 aaKnown RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 C1orf131Q8NDD1 294 aaKnown RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 PNISRQ8TF01 805 aaKnown RBP10.92□□□□□ -0.66
VSIG1-201ENST00000217957 BRINP2Q9C0B6 783 aa10.92□□□□□ -0.66
VSIG1-201ENST00000217957 SCGB1D2O95969 90 aa10.91□□□□□ -0.66
VSIG1-201ENST00000217957 TTC30BQ8N4P2 665 aa10.91□□□□□ -0.66
VSIG1-201ENST00000217957 METTL5Q9NRN9 209 aaKnown RBP10.91□□□□□ -0.66
VSIG1-201ENST00000217957 GGT7Q9UJ14 662 aa10.91□□□□□ -0.66
VSIG1-201ENST00000217957 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.66
VSIG1-201ENST00000217957 TERF1P54274 439 aa10.91□□□□□ -0.66
VSIG1-201ENST00000217957 PRPF38BQ5VTL8 546 aaKnown RBP10.91□□□□□ -0.66
VSIG1-201ENST00000217957 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
VSIG1-201ENST00000217957 HOMER2Q9NSB8 354 aa10.91□□□□□ -0.66
VSIG1-201ENST00000217957 NAP1L2Q9ULW6 460 aaPredicted RBP10.91□□□□□ -0.66
VSIG1-201ENST00000217957 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
VSIG1-201ENST00000217957 CARMIL1Q5VZK9 1371 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 NPHP1O15259 732 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
VSIG1-201ENST00000217957 BRDTQ58F21 947 aaPredicted RBP10.9□□□□□ -0.66
VSIG1-201ENST00000217957 PAF1Q8N7H5 531 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 COPRSQ9NQ92 184 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.66
VSIG1-201ENST00000217957 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 CKAP2LQ8IYA6 745 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 SMAD5Q99717 465 aaKnown RBP10.9□□□□□ -0.66
VSIG1-201ENST00000217957 CENPOQ9BU64 300 aa10.9□□□□□ -0.66
VSIG1-201ENST00000217957 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.9□□□□□ -0.66
VSIG1-201ENST00000217957 KIF21BO75037 1637 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 ATP5J2-PTCD1G3V325 749 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 RNF135Q8IUD6 432 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 LILRB2Q8N423 598 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 SCYL1Q96KG9 808 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 SMAPO00193 183 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 DKK1O94907 266 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 COL9A1P20849 921 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
VSIG1-201ENST00000217957 C8orf48Q96LL4 319 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 RASA3Q14644 834 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 PDILTQ8N807 584 aa10.89□□□□□ -0.67
VSIG1-201ENST00000217957 INO80BQ9C086 356 aaPredicted RBP10.89□□□□□ -0.67
VSIG1-201ENST00000217957 EEA1Q15075 1411 aa10.88□□□□□ -0.67
VSIG1-201ENST00000217957 SHTN1A0MZ66 631 aa10.88□□□□□ -0.67
VSIG1-201ENST00000217957 BPNT1O95861 308 aa10.88□□□□□ -0.67
VSIG1-201ENST00000217957 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
VSIG1-201ENST00000217957 ATCAYQ86WG3 371 aa10.88□□□□□ -0.67
VSIG1-201ENST00000217957 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
VSIG1-201ENST00000217957 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
VSIG1-201ENST00000217957 PLEKHG4Q58EX7 1191 aa10.88□□□□□ -0.67
VSIG1-201ENST00000217957 C1orf216Q8TAB5 229 aa10.88□□□□□ -0.67
VSIG1-201ENST00000217957 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
VSIG1-201ENST00000217957 DEPDC7Q96QD5 511 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 SAP130Q9H0E3 1048 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 BSDC1Q9NW68 430 aaPredicted RBP10.87□□□□□ -0.67
VSIG1-201ENST00000217957 TPX2Q9ULW0 747 aaKnown RBP10.87□□□□□ -0.67
VSIG1-201ENST00000217957 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 ALDH1L1O75891 902 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 IGHA2P01877 340 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 KSR2Q6VAB6 950 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 VPS37AQ8NEZ2 397 aa10.87□□□□□ -0.67
VSIG1-201ENST00000217957 ARHGEF12Q9NZN5 1544 aa10.86□□□□□ -0.67
VSIG1-201ENST00000217957 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
VSIG1-201ENST00000217957 PTMAP06454 111 aaKnown RBP10.86□□□□□ -0.67
VSIG1-201ENST00000217957 RRM1P23921 792 aa10.86□□□□□ -0.67
VSIG1-201ENST00000217957 CNGA1P29973 690 aa10.86□□□□□ -0.67
VSIG1-201ENST00000217957 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
VSIG1-201ENST00000217957 ANKS3Q6ZW76 656 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms