RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CCDC158Q5M9N0 1113 aa14.69□□□□□ -0.06
TM9SF4-201ENST00000217315 SNRPA1P09661 255 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-201ENST00000217315 PKP1Q13835 747 aa14.69□□□□□ -0.06
TM9SF4-201ENST00000217315 MED14O60244 1454 aa14.69□□□□□ -0.06
TM9SF4-201ENST00000217315 GJB2P29033 226 aa14.69□□□□□ -0.06
TM9SF4-201ENST00000217315 KIF6Q6ZMV9 814 aa14.69□□□□□ -0.06
TM9SF4-201ENST00000217315 TTC39AQ5SRH9 613 aa14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 SPC24Q8NBT2 197 aa14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 SH2B1Q9NRF2 756 aaPredicted RBP14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 BABAM1Q9NWV8 329 aa14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 MROH1Q8NDA8 1641 aa14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 KRT32Q14532 448 aa14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 NFXL1Q6ZNB6 911 aa14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 RBM8AQ9Y5S9 174 aaKnown RBP14.68□□□□□ -0.06
TM9SF4-201ENST00000217315 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 PIK3C2BO00750 1634 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 SPATA32Q96LK8 384 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 SDF4Q9BRK5 362 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 CNNM1Q9NRU3 951 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 KLHDC4Q8TBB5 520 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 AK2P54819 239 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 TPM4P67936 248 aa14.67□□□□□ -0.06
TM9SF4-201ENST00000217315 CCDC192P0DO97 292 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 CAMK4Q16566 473 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 DDX46Q7L014 1031 aaKnown RBP14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 TFIP11Q9UBB9 837 aaKnown RBP14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 PALD1Q9ULE6 856 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 FRMPD1Q5SYB0 1578 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 SYNE3Q6ZMZ3 975 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 CHAMP1Q96JM3 812 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 TRIM5Q9C035 493 aa14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
TM9SF4-201ENST00000217315 NLRP1Q9C000 1473 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 PPFIA3O75145 1194 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 SSH3Q8TE77 659 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 C19orf44Q9H6X5 657 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 CNPY2Q9Y2B0 182 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 GOLIM4O00461 696 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 TRIM29Q14134 588 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 UNC5CLQ8IV45 518 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
TM9SF4-201ENST00000217315 HOXB7P09629 217 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 IFIT1P09914 478 aaKnown RBP14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 LMBR1LQ6UX01 489 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 USP48Q86UV5 1035 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 RRAGDQ9NQL2 400 aaPredicted RBP14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 USP25Q9UHP3 1055 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 ZSCAN22P10073 491 aaPredicted RBP14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 NMIQ13287 307 aaPredicted RBP14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 CCDC183Q5T5S1 534 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 ZNF790Q6PG37 636 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 DDX17Q92841 729 aaKnown RBP14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 NUP62CLQ9H1M0 184 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 SGSM2O43147 1006 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 SNRKQ9NRH2 765 aa14.64□□□□□ -0.07
TM9SF4-201ENST00000217315 KINO60870 393 aaKnown RBP14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 CADPS2Q86UW7 1296 aa14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 LRSAM1Q6UWE0 723 aa14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 ZNF592Q92610 1267 aa14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 INTS4Q96HW7 963 aaKnown RBP14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 ME1P48163 572 aa14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 LRRC2Q9BYS8 371 aa14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 TBC1D2BQ9UPU7 963 aa14.63□□□□□ -0.07
TM9SF4-201ENST00000217315 NEURL4Q96JN8 1562 aa14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 MYOM1P52179 1685 aa14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 PPLO60437 1756 aa14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 IBTKQ9P2D0 1353 aaPredicted RBP14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 GIGYF1O75420 1035 aaPredicted RBP14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 GAS2L3Q86XJ1 694 aa14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 HCLS1P14317 486 aaPredicted RBP14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 SUCLG2Q96I99 432 aa14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 TMOD3Q9NYL9 352 aa14.62□□□□□ -0.07
TM9SF4-201ENST00000217315 RBM10P98175 930 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 AKAP17AQ02040 695 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 GUCY1B3Q02153 619 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 BEND3Q5T5X7 828 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 VPS37DQ86XT2 251 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 STK11IPQ8N1F8 1099 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 IDH1O75874 414 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 GPTP24298 496 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 CLCN1P35523 988 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 CCT2P78371 535 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 LMBRD1Q9NUN5 540 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 CWC25Q9NXE8 425 aaPredicted RBP14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 DNM1Q05193 864 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 PROSER3Q2NL68 480 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 GIMAP6Q6P9H5 292 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 OSBPL3Q9H4L5 887 aa14.61□□□□□ -0.07
TM9SF4-201ENST00000217315 CPS1P31327 1500 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 SYT1P21579 422 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 UBE2HP62256 183 aa14.6□□□□□ -0.07
TM9SF4-201ENST00000217315 STK38Q15208 465 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms