RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 KRBA2Q6ZNG9 492 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 AK7Q96M32 723 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 SDF4Q9BRK5 362 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 RASSF4Q9H2L5 321 aa11.85□□□□□ -0.51
CLDN18-201ENST00000183605 KINO60870 393 aaKnown RBP11.85□□□□□ -0.51
CLDN18-201ENST00000183605 URI1O94763 535 aaPredicted RBP11.85□□□□□ -0.51
CLDN18-201ENST00000183605 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
CLDN18-201ENST00000183605 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
CLDN18-201ENST00000183605 ARHGAP31Q2M1Z3 1444 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 UBTFL1P0CB47 393 aaPredicted RBP11.84□□□□□ -0.51
CLDN18-201ENST00000183605 ARID5BQ14865 1188 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 TXLNBQ8N3L3 684 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 PPP6R1Q9UPN7 881 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 RAD50Q92878 1312 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLDN18-201ENST00000183605 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 NOM1Q5C9Z4 860 aaKnown RBP11.84□□□□□ -0.51
CLDN18-201ENST00000183605 TTC6Q86TZ1 520 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 SNX14Q9Y5W7 946 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
CLDN18-201ENST00000183605 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.51
CLDN18-201ENST00000183605 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.83□□□□□ -0.51
CLDN18-201ENST00000183605 UNC5CLQ8IV45 518 aa11.83□□□□□ -0.51
CLDN18-201ENST00000183605 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.51
CLDN18-201ENST00000183605 SH2B1Q9NRF2 756 aaPredicted RBP11.83□□□□□ -0.51
CLDN18-201ENST00000183605 MTMR6Q9Y217 621 aa11.83□□□□□ -0.51
CLDN18-201ENST00000183605 RIMS1Q86UR5 1692 aaKnown RBP11.83□□□□□ -0.52
CLDN18-201ENST00000183605 SBNO2Q9Y2G9 1366 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 LMAN1P49257 510 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 COG3Q96JB2 828 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 POLKQ9UBT6 870 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 USP27XA6NNY8 438 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 HSPA4P34932 840 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 SF3A1Q15459 793 aaKnown RBP11.83□□□□□ -0.52
CLDN18-201ENST00000183605 SKIDA1Q1XH10 827 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 LEKR1Q6ZMV7 388 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 RUFY3Q7L099 469 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 PTCH1Q13635 1447 aa11.83□□□□□ -0.52
CLDN18-201ENST00000183605 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 SFPQP23246 707 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLDN18-201ENST00000183605 GTF2A1P52655 376 aaPredicted RBP11.82□□□□□ -0.52
CLDN18-201ENST00000183605 LRRC8AQ8IWT6 810 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 NAT10Q9H0A0 1025 aaKnown RBP11.82□□□□□ -0.52
CLDN18-201ENST00000183605 VWDEQ8N2E2 1590 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 MROH1Q8NDA8 1641 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 CEP57L1Q8IYX8 460 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 CDK19Q9BWU1 502 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 DNAI1Q9UI46 699 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 PTPRCP08575 1304 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 NPHP3Q7Z494 1330 aa11.82□□□□□ -0.52
CLDN18-201ENST00000183605 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 CREBRFQ8IUR6 639 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 CCDC144CPQ8IYA2 1237 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 DDX11Q96FC9 970 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 TOMM22Q9NS69 142 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 IQGAP1P46940 1657 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 APPP05067 770 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 RAD51AP2Q09MP3 1159 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 TMC6Q7Z403 805 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 OSBPL3Q9H4L5 887 aa11.81□□□□□ -0.52
CLDN18-201ENST00000183605 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 G2E3Q7L622 706 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 MED14O60244 1454 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 LARGE1O95461 756 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 PSMA5P28066 241 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 BLOC1S2Q6QNY1 142 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 FUCA2Q9BTY2 467 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 PNMA6EA0A0J9YXQ4 647 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 ME1P48163 572 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 GSDMDP57764 484 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 STX1AQ16623 288 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
CLDN18-201ENST00000183605 IQGAP3Q86VI3 1631 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 NR1I2O75469 434 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 IFIT2P09913 472 aaKnown RBP11.79□□□□□ -0.52
CLDN18-201ENST00000183605 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
CLDN18-201ENST00000183605 GPATCH11Q8N954 259 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 PIK3R4Q99570 1358 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
CLDN18-201ENST00000183605 SRGAP3O43295 1099 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 CAVIN2O95810 425 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 CLCN6P51797 869 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 ZSCAN26Q16670 478 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 AOPEPQ8N6M6 819 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 ANO10Q9NW15 660 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 ATP7AQ04656 1500 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 UNC13BO14795 1591 aa11.79□□□□□ -0.52
CLDN18-201ENST00000183605 TDRD7Q8NHU6 1098 aaKnown RBP11.78□□□□□ -0.52
CLDN18-201ENST00000183605 SGSM2O43147 1006 aa11.78□□□□□ -0.52
CLDN18-201ENST00000183605 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
CLDN18-201ENST00000183605 CAPN2P17655 700 aa11.78□□□□□ -0.52
CLDN18-201ENST00000183605 FEZ2Q9UHY8 353 aaPredicted RBP11.78□□□□□ -0.52
CLDN18-201ENST00000183605 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
CLDN18-201ENST00000183605 MYOM1P52179 1685 aa11.78□□□□□ -0.52
CLDN18-201ENST00000183605 A0A087WWV3 80 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms