RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 RAD50Q92878 1312 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 SETD1BQ9UPS6 1966 aaKnown RBP6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 SGSM2O43147 1006 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 GTF2F1P35269 517 aaKnown RBP eCLIP6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 UBE2HP62256 183 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 HMGN5P82970 282 aaKnown RBP6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 NCBP1Q09161 790 aaKnown RBP6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 CCDC144BQ3MJ40 725 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 CCDC186Q7Z3E2 898 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 CCDC144CPQ8IYA2 1237 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 RTF1Q92541 710 aaKnown RBP6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 SMC3Q9UQE7 1217 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 CCDC61Q9Y6R9 512 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 ACEP12821 1306 aa6.99□□□□□ -1.29
CEACAM1-201ENST00000161559 SRGAP3O43295 1099 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 KCNQ3O43525 872 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 CCT4P50991 539 aaKnown RBP6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 FAM227BQ96M60 508 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 FTOQ9C0B1 505 aaKnown RBP eCLIP6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 TPCN1Q9ULQ1 816 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 MRVI1Q9Y6F6 885 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 XRN1Q8IZH2 1706 aaKnown RBP6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 NPHP1O15259 732 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 CEBPZQ03701 1054 aaKnown RBP6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 ZNF592Q92610 1267 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 ZBTB9Q96C00 473 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 EYA1Q99502 592 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 C3P01024 1663 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 DIP2BQ9P265 1576 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 ANO6Q4KMQ2 910 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 RHPN1Q8TCX5 695 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 EDC3Q96F86 508 aaKnown RBP6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 PRIMPOLQ96LW4 560 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 STAP2Q9UGK3 403 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 AATKQ6ZMQ8 1374 aa6.98□□□□□ -1.29
CEACAM1-201ENST00000161559 TTC21BQ7Z4L5 1316 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 PHF14O94880 888 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 UBTFL1P0CB47 393 aaPredicted RBP6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 MCM2P49736 904 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 ANAPC15P60006 121 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 TMEM87AQ8NBN3 555 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 IL17REQ8NFR9 667 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 STK31Q9BXU1 1019 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 LIMCH1Q9UPQ0 1083 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 DACT1Q9NYF0 836 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 TLR7Q9NYK1 1049 aaKnown RBP6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 USP16Q9Y5T5 823 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 MON2Q7Z3U7 1717 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 NR1I2O75469 434 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 KLHDC4Q8TBB5 520 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 DNAJC25Q9H1X3 360 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 CBX8Q9HC52 389 aa6.97□□□□□ -1.29
CEACAM1-201ENST00000161559 ROBO2Q9HCK4 1378 aa6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 PRAMEF22A3QJZ6 481 aa6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 JAK2O60674 1132 aa6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 HSPA2P54652 639 aa6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 TYRO3Q06418 890 aa6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 DRC7Q8IY82 874 aa6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 CACTINQ8WUQ7 758 aaKnown RBP6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 ANKRD7Q92527 254 aa6.96□□□□□ -1.29
CEACAM1-201ENST00000161559 NRXN3Q9Y4C0 1643 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 FAM208AQ9UK61 1670 aaKnown RBP6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 SLFNL1Q499Z3 407 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 FAM184AQ8NB25 1140 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 LRRN4CLQ8ND94 238 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 LRRC2Q9BYS8 371 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 PDRG1Q9NUG6 133 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 NRKQ7Z2Y5 1582 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 A2ML1A8K2U0 1454 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 TAF7Q15545 349 aaPredicted RBP6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 UVSSAQ2YD98 709 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 LARP1Q6PKG0 1096 aaKnown RBP6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 MTERF4Q7Z6M4 381 aaKnown RBP6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 CHPF2Q9P2E5 772 aa6.96□□□□□ -1.3
CEACAM1-201ENST00000161559 PI4KAP2A4QPH2 592 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 PTPN21Q16825 1174 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 PI4KAP1Q8N8J0 262 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 SSH3Q8TE77 659 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 TRMT1Q9NXH9 659 aaKnown RBP6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 CCDC9Q9Y3X0 531 aaKnown RBP6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 TNRQ92752 1358 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 IFIT2P09913 472 aaKnown RBP6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 RGPD1P0DJD0 1748 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 ITSN1Q15811 1721 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 CWF19L2Q2TBE0 894 aaKnown RBP6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 LARP1BQ659C4 914 aaKnown RBP6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 PGBD1Q96JS3 809 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 TRIM5Q9C035 493 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 SIL1Q9H173 461 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 LGR6Q9HBX8 967 aa6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 CGNQ9P2M7 1197 aaKnown RBP6.95□□□□□ -1.3
CEACAM1-201ENST00000161559 AKAP12Q02952 1782 aa6.94□□□□□ -1.3
CEACAM1-201ENST00000161559 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
CEACAM1-201ENST00000161559 VGLL3A8MV65 326 aa6.94□□□□□ -1.3
CEACAM1-201ENST00000161559 CTIFO43310 598 aaKnown RBP6.94□□□□□ -1.3
CEACAM1-201ENST00000161559 GNAI3P08754 354 aa6.94□□□□□ -1.3
CEACAM1-201ENST00000161559 OS9Q13438 667 aaPredicted RBP6.94□□□□□ -1.3
CEACAM1-201ENST00000161559 PROSER3Q2NL68 480 aa6.94□□□□□ -1.3
CEACAM1-201ENST00000161559 HDGFL1Q5TGJ6 251 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms