RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 CAMTA2O94983 1202 aa12.93□□□□□ -0.34
CD9-201ENST00000009180 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
CD9-201ENST00000009180 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
CD9-201ENST00000009180 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
CD9-201ENST00000009180 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
CD9-201ENST00000009180 SSH1Q8WYL5 1049 aa12.93□□□□□ -0.34
CD9-201ENST00000009180 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
CD9-201ENST00000009180 BCORQ6W2J9 1755 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 A0A087WZG4 1122 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 GYS1P13807 737 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 FKBP8Q14318 412 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 KIF6Q6ZMV9 814 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 HYPKQ9NX55 129 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
CD9-201ENST00000009180 ZPR1O75312 459 aa12.91□□□□□ -0.34
CD9-201ENST00000009180 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
CD9-201ENST00000009180 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
CD9-201ENST00000009180 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
CD9-201ENST00000009180 SMC4Q9NTJ3 1288 aa12.91□□□□□ -0.34
CD9-201ENST00000009180 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
CD9-201ENST00000009180 MAP3K15Q6ZN16 1313 aa12.9□□□□□ -0.34
CD9-201ENST00000009180 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
CD9-201ENST00000009180 FLIIQ13045 1269 aa12.9□□□□□ -0.34
CD9-201ENST00000009180 HLFQ16534 295 aa12.9□□□□□ -0.34
CD9-201ENST00000009180 BCAR3O75815 825 aa12.89□□□□□ -0.35
CD9-201ENST00000009180 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
CD9-201ENST00000009180 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
CD9-201ENST00000009180 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
CD9-201ENST00000009180 ADCY9O60503 1353 aa12.89□□□□□ -0.35
CD9-201ENST00000009180 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
CD9-201ENST00000009180 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
CD9-201ENST00000009180 MTFR1LQ9H019 292 aa12.88□□□□□ -0.35
CD9-201ENST00000009180 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
CD9-201ENST00000009180 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
CD9-201ENST00000009180 F6X3S4 739 aa12.87□□□□□ -0.35
CD9-201ENST00000009180 GPTP24298 496 aa12.87□□□□□ -0.35
CD9-201ENST00000009180 DDR1Q08345 913 aa12.87□□□□□ -0.35
CD9-201ENST00000009180 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
CD9-201ENST00000009180 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
CD9-201ENST00000009180 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
CD9-201ENST00000009180 SLC16A10Q8TF71 515 aa12.87□□□□□ -0.35
CD9-201ENST00000009180 MAP3K2Q9Y2U5 619 aa12.87□□□□□ -0.35
CD9-201ENST00000009180 PI4KAP2A4QPH2 592 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 MMP10P09238 476 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 NFIXQ14938 502 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 RIC3Q7Z5B4 369 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 PI4KAP1Q8N8J0 262 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 TNNQ9UQP3 1299 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 ZNF652Q9Y2D9 606 aa12.86□□□□□ -0.35
CD9-201ENST00000009180 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 ATP5J2-PTCD1G3V325 749 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 DDX58O95786 925 aaKnown RBP12.85□□□□□ -0.35
CD9-201ENST00000009180 PTGER2P43116 358 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
CD9-201ENST00000009180 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
CD9-201ENST00000009180 MYD88Q99836 296 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 RCAN3Q9UKA8 241 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 NOB1Q9ULX3 412 aaKnown RBP12.85□□□□□ -0.35
CD9-201ENST00000009180 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
CD9-201ENST00000009180 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 UBN2Q6ZU65 1347 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
CD9-201ENST00000009180 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
CD9-201ENST00000009180 NUP98P52948 1817 aa12.84□□□□□ -0.35
CD9-201ENST00000009180 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
CD9-201ENST00000009180 TM4SF1P30408 202 aa12.84□□□□□ -0.35
CD9-201ENST00000009180 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
CD9-201ENST00000009180 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
CD9-201ENST00000009180 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
CD9-201ENST00000009180 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
CD9-201ENST00000009180 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
CD9-201ENST00000009180 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
CD9-201ENST00000009180 PTPRCP08575 1304 aa12.83□□□□□ -0.36
CD9-201ENST00000009180 KIF16BQ96L93 1317 aa12.83□□□□□ -0.36
CD9-201ENST00000009180 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 RGL2O15211 777 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 POLD1P28340 1107 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 BRPF1P55201 1214 aaPredicted RBP12.82□□□□□ -0.36
CD9-201ENST00000009180 CWF19L2Q2TBE0 894 aaKnown RBP12.82□□□□□ -0.36
CD9-201ENST00000009180 SLC4A10Q6U841 1118 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 SETDB2Q96T68 719 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
CD9-201ENST00000009180 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
CD9-201ENST00000009180 PLIN1O60240 522 aa12.81□□□□□ -0.36
CD9-201ENST00000009180 SERPINB2P05120 415 aa12.81□□□□□ -0.36
CD9-201ENST00000009180 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
CD9-201ENST00000009180 SUSD4Q5VX71 490 aa12.81□□□□□ -0.36
CD9-201ENST00000009180 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
CD9-201ENST00000009180 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
CD9-201ENST00000009180 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
CD9-201ENST00000009180 NTSR2O95665 410 aa12.8□□□□□ -0.36
CD9-201ENST00000009180 TRIM27P14373 513 aa12.8□□□□□ -0.36
CD9-201ENST00000009180 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
CD9-201ENST00000009180 NUTM1Q86Y26 1132 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms