RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Nsd3Q6P2L6 1439 aa10.7□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Mast1Q9R1L5 1570 aa10.7□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Zkscan7E9PVW1 718 aa10.7□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Tmem132eQ6IEE6 982 aa10.7□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Usp25P57080 1055 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Zfp91Q62511 572 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Mrps27Q8BK72 415 aaKnown RBP10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Magi3Q9EQJ9 1476 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Hap1O35668 628 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ccdc181Q80ZU5 509 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Flad1Q8R123 492 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 AU022751B1B0V2 589 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Noc2lQ9WV70 747 aaKnown RBP10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Abcd1P48410 736 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Sass6Q80UK7 654 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Kdm5aQ3UXZ9 1690 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Tmem67Q8BR76 992 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 RestQ8VIG1 1082 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Dnajc5bQ9CQ94 199 aa10.69□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Irf9Q61179 399 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Necab1Q8BG18 352 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Cep55Q8BT07 462 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Iqca1Q9CUL5 857 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Chaf1aQ9QWF0 911 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Dctn1O08788 1281 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Eif4a2P10630 407 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 2310002L09RikQ9D7L5 217 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Zbtb45Q52KG4 520 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ppfia1B2RXQ2 1266 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Uri1Q3TLD5 531 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Matr3Q8K310 846 aaKnown RBP10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Dmrtc1Q9D9R7 182 aa10.68□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Sbno1Q689Z5 1390 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Zkscan16A2ALW2 728 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Prim1P20664 417 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Hand2Q61039 217 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Dnaaf4Q8R368 420 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Slc5a4bQ91ZP4 660 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ccdc39Q9D5Y1 937 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Jakmip2D3YXK0 820 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ano6Q6P9J9 911 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Stxbp4Q9WV89 557 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Hmgb2P30681 210 aaKnown RBP10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Pa2g4P50580 394 aaKnown RBP10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Nat10Q8K224 1024 aaKnown RBP10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Mapk8ip1Q9WVI9 707 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Cep135Q6P5D4 1140 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Fbxo3Q9DC63 480 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Adgrl2Q8JZZ7 1487 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Asxl2Q8BZ32 1370 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Mum1Q6DID5 682 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Atf7Q8R0S1 413 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Gm16486A0A1D5RMD1 1434 aa10.67□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Kdm5cP41230 1554 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ces1hD3Z298 562 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Limch1Q3UH68 1057 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Tmc2Q8R4P4 888 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Rbm8a2A0A0N4SUH6 174 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Rbm8aQ9CWZ3 174 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Zscan20B2KFW1 1030 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Gtpbp6Q3U6U5 514 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Jarid2Q62315 1234 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Tango6Q8C3S2 1079 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Cdkl5Q3UTQ8 938 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Krt84Q99M73 603 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Lrrc7Q80TE7 1490 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ddx23D3Z0M9 819 aaKnown RBP10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Stx1aO35526 288 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Gzf1Q4VBD9 706 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Larp1Q6ZQ58 1072 aaKnown RBP10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 CenpqQ9CPQ5 267 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Zbtb12Q9Z150 459 aa10.66□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Atp8b2P98199 1209 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Znf219Q6IQX8 726 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 IncenpQ9WU62 880 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 PalldQ9ET54 1408 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ccdc158Q8CDI6 1109 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Galntl5Q9D4M9 431 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Hoxa7P02830 229 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Tnni2P13412 182 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 VeztQ3ZK22 780 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ehmt1Q5DW34 1296 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Pdzrn3Q69ZS0 1063 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Smc1aQ9CU62 1233 aaKnown RBP10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ppip5k1A2ARP1 1436 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Cep120Q7TSG1 988 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Nup133Q8R0G9 1155 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Mcmdc2E9Q956 681 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Gjc1P28229 396 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Ddx46Q569Z5 1032 aaKnown RBP10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Znf653Q6YND2 615 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Larp6Q8BN59 492 aa10.65□□□□□ -0.7
Scn8a-213ENSMUST00000201549 Rnf187Q8BFX1 236 aa10.65□□□□□ -0.71
Scn8a-213ENSMUST00000201549 ImmtQ8CAQ8 757 aaKnown RBP10.65□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Abcc2Q8VI47 1543 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Zscan29E9Q5B4 869 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Stat1P42225 749 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Soga3Q6NZL0 945 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ddx58Q6Q899 926 aa10.64□□□□□ -0.71
Scn8a-213ENSMUST00000201549 MicalclQ9D5U9 680 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms