RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 CgnP59242 1191 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Utp18Q5SSI6 552 aaKnown RBP12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Jakmip1Q8BVL9 626 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Rnf123Q5XPI3 1314 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Atg4a-psA0A0G2JFS9 396 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Nap1l1P28656 391 aaKnown RBP12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Strn4P58404 760 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Atg4aQ8C9S8 396 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 TnmdQ9EP64 317 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Cnpy2Q9QXT0 182 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Sh3bp5Q9Z131 463 aa12□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Med14A2ABV5 1459 aaKnown RBP11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Mctp1E9PV86 951 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Dnaaf2Q8BPI1 814 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ndufa8Q9DCJ5 172 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Tom1O88746 492 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Usp48Q3V0C5 1052 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 FntaQ61239 377 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Mns1Q61884 491 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ap3b2Q9JME5 1082 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Acbd5Q5XG73 508 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 RestQ8VIG1 1082 aa11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Snw1Q9CSN1 536 aaKnown RBP11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Smc3Q9CW03 1217 aaKnown RBP11.99□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Kcng1A2BDX4 514 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ccdc102aQ3TMW1 549 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Adcy2Q80TL1 1090 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 GzmnQ920S1 248 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Smc1aQ9CU62 1233 aaKnown RBP11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ccdc7Q9D541 371 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Adgrl2Q8JZZ7 1487 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Tbc1d4Q8BYJ6 1307 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ccdc38Q8CDN8 563 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Calcoco2A2A6M5 331 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Tsen34Q8BMZ5 316 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Cdc37l1Q9CZP7 335 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 CenpjQ569L8 1344 aa11.98□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Plcb3P51432 1234 aaKnown RBP11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Anapc15P60007 132 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Vps18Q8R307 973 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Igbp1bQ9QZ29 343 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ppp2r3dQ9Z176 491 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Hfm1D3Z4R1 1434 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Adamtsl3G3UXC7 1706 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ttc21bQ0HA38 1315 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 AU022751B1B0V2 589 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Znf568E9PYI1 671 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Cfap69Q8BH53 942 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ric3Q8BPM6 367 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 NagaQ9QWR8 415 aa11.97□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Hecw1Q8K4P8 1604 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Hmox1P14901 289 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Map9Q3TRR0 646 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Rnaseh1O70338 285 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Cnnm3Q32NY4 713 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Uri1Q3TLD5 531 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ccdc66Q6NS45 935 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ints3Q7TPD0 1041 aaKnown RBP11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Q8VDP2 222 aa11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ddx27Q921N6 760 aaKnown RBP11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Ssr1Q9CY50 286 aaKnown RBP11.96□□□□□ -0.49
Ctc1-202ENSMUST00000116359 Abcc6Q9R1S7 1498 aa11.96□□□□□ -0.5
Ctc1-202ENSMUST00000116359 MecomP14404 1042 aa11.96□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Q8CEZ4 452 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Dact1Q8R4A3 778 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Ciz1Q8VEH2 845 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Adgrl1Q80TR1 1466 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Slu7Q8BHJ9 585 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Gimap5Q8BWF2 308 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Rab11fip3Q8CHD8 1047 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 MpripP97434 1024 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Dnaaf4Q8R368 420 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Saal1Q9D2C2 474 aa11.95□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Esyt1Q3U7R1 1092 aaKnown RBP11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Kiaa0556Q8C753 1610 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Cep152A2AUM9 1736 aaKnown RBP11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Zkscan2G3X952 960 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Tm6sf1P58749 370 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Lins1Q3U1D0 764 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 CltcQ68FD5 1675 aaKnown RBP11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Rufy3Q9D394 469 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Abca6Q8K441 1624 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Anks1aP59672 1150 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Slc7a3P70423 618 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Nol8Q3UHX0 1147 aaKnown RBP11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Fhod1Q6P9Q4 1197 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Nap1l3Q794H2 544 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Prc1Q99K43 603 aaKnown RBP11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Sh3bgrQ9WUZ7 214 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 ChmQ9QXG2 665 aa11.94□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Talpid3E9PV87 1520 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 PaskQ8CEE6 1383 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Q32P12 615 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Ppm1eQ80TL0 749 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Cdc42bpgQ80UW5 1551 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Skint5A7XUY5 1461 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Casz1Q9CWL2 1761 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Cdc42bpbQ7TT50 1713 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Gm42641I6L9G2 585 aa11.93□□□□□ -0.5
Ctc1-202ENSMUST00000116359 Npdc1Q64322 332 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms