RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Smc1aQ9CU62 1233 aaKnown RBP8.96□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Arhgap5P97393 1501 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 MarsQ68FL6 902 aaKnown RBP8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Aldh1l2Q8K009 923 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Chaf1aQ9QWF0 911 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Trim55G3X8Y1 545 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Kif3cO35066 796 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Psen1P49769 467 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ctr9Q62018 1173 aaKnown RBP8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Cgref1Q8R1U2 281 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Hecw2Q6I6G8 1578 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ms4a2P20490 235 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Sparcl1P70663 650 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Q8CEZ4 452 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Kcnk13Q8R1P5 405 aa8.95□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Abcc1O35379 1528 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Fsd2Q8BZ52 692 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 NaspQ99MD9 773 aaKnown RBP8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 HypkQ9CR41 129 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Lnx1O70263 728 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Map9Q3TRR0 646 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ppm1eQ80TL0 749 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Dnaaf4Q8R368 420 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ppp2r3dQ9Z176 491 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Mcm10Q0VBD2 885 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 FntaQ61239 377 aa8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 CrebrfQ8CDG5 640 aaKnown RBP8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Prc1Q99K43 603 aaKnown RBP8.94□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Tpx2A2APB8 745 aaKnown RBP8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Cabp2Q9JLK4 216 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Nphp1Q9QY53 687 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Abcc2Q8VI47 1543 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Anks1aP59672 1150 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Srgap3Q812A2 1099 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Cfap69Q8BH53 942 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ano10Q8BH79 659 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Spata16Q8C636 571 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Zkscan3Q91VW9 553 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 ChmQ9QXG2 665 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ptch1Q61115 1434 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Nap1l1P28656 391 aaKnown RBP8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Bmp2kQ91Z96 1138 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Fam76aQ922G2 307 aa8.93□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Gm3409A0A0G2JE67 319 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Acbd5Q5XG73 508 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Trim25Q61510 634 aaKnown RBP8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Tti2Q8BGV4 512 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Dnm3Q8BZ98 863 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Aox4Q3TYQ9 1336 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Robo2Q7TPD3 1470 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Gm42641I6L9G2 585 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Leo1Q5XJE5 667 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Panx2Q6IMP4 677 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 AtripQ8BMG1 785 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Q66JV7 365 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ppp1r42Q8R1Z4 357 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Dact1Q8R4A3 778 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 GzmnQ920S1 248 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Osbpl5Q9ER64 874 aa8.92□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Atp7bQ64446 1462 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 CoblQ5NBX1 1337 aaKnown RBP8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ktn1Q61595 1327 aaKnown RBP8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Fchsd2Q3USJ8 740 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Cavin2Q63918 418 aaKnown RBP8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Tmco3Q8BH01 678 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Mei4Q8BRM6 389 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Tceanc2Q8R2M0 207 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Pcdhb15Q91Y04 786 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Maats1Q8BRC6 783 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Tmx4Q8C0L0 335 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Kiaa0556Q8C753 1610 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Rad50P70388 1312 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Ercc3P49135 783 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Unc5clQ6R653 518 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Adcy2Q80TL1 1090 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Zc3h6Q8BYK8 1177 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Krt85Q9Z2T6 507 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Skint5A7XUY5 1461 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Fancd2Q80V62 1450 aa8.91□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Lrrc6O88978 473 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Plcb3P51432 1234 aaKnown RBP8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Tada3Q8R0L9 432 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Cdca7lQ922M5 438 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Stk26Q99JT2 416 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 1700113H08RikE9Q9Q5 327 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Birc3O08863 600 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Fhod1Q6P9Q4 1197 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Hook1Q8BIL5 728 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Q9D9S1 216 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Atp1a4Q9WV27 1032 aa8.9□□□□□ -0.98
Bdnf-209ENSMUST00000111050 Pkp1P97350 728 aaKnown RBP8.9□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Ubash3aQ3V3E1 624 aa8.9□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Smarcc2Q6PDG5 1213 aa8.9□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Drc7Q6V3W6 876 aa8.9□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Zfp113Q8C689 439 aa8.9□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Efcab8Q8C9R9 203 aa8.9□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Mrpl50Q8VDT9 159 aaKnown RBP8.9□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Tnnt1O88346 262 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 FosbP13346 338 aa8.89□□□□□ -0.99
Bdnf-209ENSMUST00000111050 Kif3bQ61771 747 aa8.89□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms