RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 CrklP47941 303 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Ppip5k2Q6ZQB6 1129 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Aldh1l1Q8R0Y6 902 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Cog6Q8R3I3 657 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Ddx17Q501J6 650 aaKnown RBP13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Prkar2bP31324 416 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Miga2Q8BK03 593 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Serpina10Q8R121 448 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Pcdhb5Q91XZ5 792 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 Glt1d1A4FUP9 346 aa13.23□□□□□ -0.29
Chd3-202ENSMUST00000108661 DlatQ8BMF4 642 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Pus7B7ZNL8 666 aaKnown RBP13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Il1rapl2Q9ERS6 686 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Knop1Q9Z2Q2 478 aaKnown RBP13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Rad23bP54728 416 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Krt85Q9Z2T6 507 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 PxdnQ3UQ28 1475 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Polr3aB2RXC6 1390 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Fam213aQ9CYH2 218 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Gm1043A0A140LJC2 1431 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Fermt2Q8CIB5 680 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Amotl1Q9D4H4 968 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Sp4Q62445 782 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Homer1Q9Z2Y3 366 aa13.22□□□□□ -0.29
Chd3-202ENSMUST00000108661 Psmd1Q3TXS7 953 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Kcna6Q61923 529 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Atp7aQ64430 1491 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Cfap74Q3UY96 1578 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Trim30cD3YVI9 513 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Kif3cO35066 796 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 CalrP14211 416 aaKnown RBP13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Triml1Q8BVP1 470 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Kif18aQ91WD7 886 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Plekhm2Q80TQ5 1018 aa13.21□□□□□ -0.29
Chd3-202ENSMUST00000108661 Abcc2Q8VI47 1543 aa13.21□□□□□ -0.3
Chd3-202ENSMUST00000108661 Tpd52l2Q9CYZ2 220 aaKnown RBP13.21□□□□□ -0.3
Chd3-202ENSMUST00000108661 Lmbr1lQ9D1E5 489 aa13.21□□□□□ -0.3
Chd3-202ENSMUST00000108661 Prrc2bQ7TPM1 1486 aaKnown RBP13.21□□□□□ -0.3
Chd3-202ENSMUST00000108661 Atp2b3Q0VF55 1220 aa13.21□□□□□ -0.3
Chd3-202ENSMUST00000108661 Large2Q5XPT3 690 aa13.21□□□□□ -0.3
Chd3-202ENSMUST00000108661 Naa16Q9DBB4 864 aa13.21□□□□□ -0.3
Chd3-202ENSMUST00000108661 Frmd3Q8BHD4 595 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Prkrip1Q9CWV6 186 aaKnown RBP13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Prkg1P0C605 671 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Erlin2Q8BFZ9 340 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Ufl1Q8CCJ3 793 aaKnown RBP13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Lrrc59Q922Q8 307 aaKnown RBP13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Dbndd1Q9CZ00 160 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Kif24Q6NWW5 1356 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Astn2Q80Z10 1352 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Rusc2Q80U22 1514 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Slc4a4O88343 1079 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Tmem266Q8BZB3 538 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Mipol1Q9D9F8 279 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Stk32bQ9JJX8 414 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Nfxl1E9Q8I7 918 aaKnown RBP13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Zbtb3Q91X45 518 aa13.2□□□□□ -0.3
Chd3-202ENSMUST00000108661 Cfap45Q9D9U9 551 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Pik3r4Q8VD65 1358 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Eme2Q56A04 373 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Sik1Q60670 779 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Mre11Q61216 706 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Atxn3Q9CVD2 355 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Samd9lQ69Z37 1561 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Pbrm1Q8BSQ9 1634 aaKnown RBP13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 TnmdQ9EP64 317 aa13.19□□□□□ -0.3
Chd3-202ENSMUST00000108661 Tbc1d2bQ3U0J8 965 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Ivns1abpQ920Q8 642 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Tnip1Q9WUU8 647 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Shroom2A2ALU4 1481 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Slx4Q6P1D7 1565 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Zap70P43404 618 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Ppp6r1Q7TSI3 856 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Irs4Q9Z0Y7 1216 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Fam160b2Q80YR2 744 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Hs2st1Q8R3H7 356 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 Cfap53Q9D439 514 aa13.18□□□□□ -0.3
Chd3-202ENSMUST00000108661 CltaO08585 235 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 HellsQ60848 821 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Eid1Q9DCR4 169 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Foxo3Q9WVH4 672 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Snrpa1P57784 255 aaKnown RBP13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Smarcc2Q6PDG5 1213 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Elf1Q60775 612 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Cc2d1bQ8BRN9 848 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Taf12Q8VE65 161 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Cetn2Q9R1K9 172 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Hand2Q61039 217 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Supt6hQ62383 1726 aaKnown RBP13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Hook2Q7TMK6 716 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Krt25Q8VCW2 446 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 AdpgkQ8VDL4 496 aa13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Api5O35841 504 aaKnown RBP13.17□□□□□ -0.3
Chd3-202ENSMUST00000108661 Pim2Q62070 370 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Txndc16Q7TN22 820 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Dennd3A2RT67 1274 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 NefhP19246 1090 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Bst2Q8R2Q8 172 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Trim11Q99PQ2 467 aa13.16□□□□□ -0.3
Chd3-202ENSMUST00000108661 Eif4a2P10630 407 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 88.9 ms