RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 Gnat3Q3V3I2 354 aa13.6□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Mylk2Q8VCR8 613 aa13.6□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Shank2Q80Z38 1476 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Exoc5Q3TPX4 708 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Rrp12Q6P5B0 1295 aaKnown RBP13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Abcc4E9Q236 1325 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Tgfb1i1Q62219 461 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Soga3Q6NZL0 945 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Paxip1Q6NZQ4 1056 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Zbtb40Q6PCS8 1258 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ints5Q8CHT3 1018 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Kif2cQ922S8 721 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Ttll7A4Q9F0 912 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Terf2O35144 541 aa13.59□□□□□ -0.23
Ebf3-202ENSMUST00000106118 Pde4dQ01063 747 aa13.58□□□□□ -0.24
Ebf3-202ENSMUST00000106118 NexnQ7TPW1 607 aa13.58□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Sik1Q60670 779 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Zbtb3Q91X45 518 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Rsph3aQ3UFY4 516 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 GpkowQ56A08 488 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Jmjd4Q8BFT6 427 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Q8C5K5 320 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Tpx2A2APB8 745 aaKnown RBP13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Qtrt2B8ZXI1 415 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Kdm4cQ8VCD7 1054 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Syde2E9PUP1 1314 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 MypnQ5DTJ9 1315 aa13.57□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Gm12185Q5NCB2 835 aa13.56□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Ggt6Q6PDE7 497 aa13.56□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Cwc25Q9DBF7 416 aa13.56□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Pa2g4P50580 394 aaKnown RBP13.56□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Pm20d1Q8C165 503 aa13.56□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Mrps27Q8BK72 415 aaKnown RBP13.56□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Sf3a1Q8K4Z5 791 aaKnown RBP13.56□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Gpatch11Q3UFS4 262 aa13.55□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Ripor2Q80U16 1078 aa13.55□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Rhot2Q8JZN7 620 aa13.55□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Ddx60E9PZQ1 1711 aa13.55□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Nol10Q5RJG1 687 aaKnown RBP13.55□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Mst1rQ62190 1378 aa13.55□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Crb1Q8VHS2 1405 aa13.55□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Brpf1B2RRD7 1212 aa13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Smarce1O54941 411 aaKnown RBP13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Myd88P22366 296 aa13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 InsrrQ9WTL4 1300 aa13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Casq1O09165 405 aa13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Tiam2Q6ZPF3 1715 aa13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Rbm27Q5SFM8 1060 aaKnown RBP13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Bag3Q9JLV1 577 aaKnown RBP13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Hdac6Q9Z2V5 1149 aa13.54□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Igfbp6P47880 238 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Anapc15P60007 132 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Brf1Q8CFK2 676 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 AnlnQ8K298 1121 aaKnown RBP13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Catsper2A2ARP9 588 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 AppP12023 770 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 PtmsQ9D0J8 101 aaKnown RBP13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Rnf123Q5XPI3 1314 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 NmiO35309 314 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Atp6v1dP57746 247 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Stk11ipQ3TAA7 1072 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Nol8Q3UHX0 1147 aaKnown RBP13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Nlrp9bQ66X22 1003 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Slc26a8Q8R0C3 999 aa13.53□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Ankib1Q6ZPS6 1085 aa13.52□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Fbxo2Q80UW2 297 aa13.52□□□□□ -0.24
Ebf3-202ENSMUST00000106118 AbraQ8BUZ1 375 aa13.52□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Slc5a4bQ91ZP4 660 aa13.52□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Ehd4Q9EQP2 541 aa13.52□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Stk3Q9JI10 497 aa13.52□□□□□ -0.24
Ebf3-202ENSMUST00000106118 Ddx11Q6AXC6 880 aa13.52□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Kiaa0232Q80U59 1396 aaKnown RBP13.52□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Ppp4r3aQ6P2K6 820 aa13.52□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Fam213aQ9CYH2 218 aa13.52□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Tjp1P39447 1745 aaKnown RBP13.51□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Ankrd23Q812A3 306 aa13.51□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Cap2Q9CYT6 476 aa13.51□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Vps33bP59016 617 aa13.51□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Chmp3Q9CQ10 224 aa13.51□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Chmp4cQ9D7F7 232 aa13.51□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Akap11E9Q777 1895 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Neurod6P48986 337 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Gigyf1Q99MR1 1044 aaKnown RBP13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Gtf2a1Q99PM3 378 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Tbc1d4Q8BYJ6 1307 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Prr29B1ARI9 187 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Ddb1Q3U1J4 1140 aaKnown RBP13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Sf3b2Q3UJB0 878 aaKnown RBP13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Unc5clQ6R653 518 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Znf526Q8BI66 675 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Hspa2P17156 633 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Dcaf5Q80T85 946 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Prune1Q8BIW1 454 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Nlrp3Q8R4B8 1033 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Top1mtQ8R4U6 593 aa13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 LlphQ9D945 130 aaKnown RBP13.5□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Prl3d3A0A0M6L0J6 224 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Ppfia1B2RXQ2 1266 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Taf5lQ91WQ5 589 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Prl3d2F6R3P9 224 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms